Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 3.1e-282 974.5 528 100.0
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 4.6e-257 891.0 507 89.7
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 2.3e-256 888.6 516 89.7
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.1e-230 802.4 499 81.4
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 3.8e-227 791.6 499 79.8
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 6.4e-227 790.8 499 79.6
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 1.1e-226 790.0 499 79.6
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 5.5e-226 787.7 501 78.6
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 7.1e-226 787.3 503 79.9
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 1.2e-225 786.6 502 79.5
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 6.0e-225 784.3 499 78.8
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 6.0e-225 784.3 500 79.6
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 6.0e-225 784.3 504 79.0
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.3e-224 783.1 500 79.2
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 3.0e-224 781.9 504 78.8
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 6.7e-224 780.8 499 79.2
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 1.9e-223 779.2 500 79.2
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 1.9e-223 779.2 508 82.1
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 3.3e-223 778.5 502 78.7
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 4.3e-223 778.1 499 78.6
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 5.6e-223 777.7 504 79.6
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 9.6e-223 776.9 500 78.0
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 2.1e-222 775.8 500 78.8
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 3.7e-222 775.0 505 76.8
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 4.8e-222 774.6 499 78.6
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 1.4e-221 773.1 500 78.2
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.8e-221 772.7 499 78.4
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 4.0e-221 771.5 501 77.8
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 4.0e-221 771.5 501 77.8
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 4.0e-221 771.5 502 78.5
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 5.3e-221 771.2 499 78.2
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 9.0e-221 770.4 501 77.6
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 3.4e-220 768.5 499 78.0
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 3.4e-220 768.5 505 77.8
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 5.8e-220 767.7 511 76.9
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 5.8e-220 767.7 499 77.8
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 2.9e-219 765.4 500 76.4
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 3.8e-219 765.0 492 77.2
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 4.9e-219 764.6 506 78.1
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.1e-218 763.5 500 76.4
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 2.5e-218 762.3 500 77.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 2.5e-218 762.3 500 77.2
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 3.2e-218 761.9 515 76.3
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 7.1e-218 760.8 500 76.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 2.1e-217 759.2 500 77.2
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 2.7e-217 758.8 500 77.4
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.8e-216 756.1 499 77.2
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 2.3e-216 755.7 495 76.4
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.1e-215 753.4 506 77.3
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 7.4e-215 750.7 511 75.7
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 6.3e-214 747.7 501 76.8
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 6.3e-214 747.7 508 75.0
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.8e-213 746.1 562 71.5
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 5.3e-213 744.6 503 75.3
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 3.4e-212 741.9 503 75.3
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 3.4e-212 741.9 608 67.1
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 2.2e-211 739.2 503 75.0
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 3.8e-211 738.4 500 74.6
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 8.5e-211 737.3 503 76.3
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.1e-210 736.9 520 72.7
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 3.2e-210 735.3 500 75.0
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 7.2e-210 734.2 500 75.0
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 6.1e-209 731.1 507 74.2
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.8e-208 729.6 498 74.7
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.1e-207 726.9 499 74.5
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 4.3e-207 724.9 500 74.0
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 9.7e-207 723.8 503 73.4
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.2e-206 722.6 521 72.0
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 8.2e-206 720.7 499 74.3
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 1.1e-205 720.3 500 74.8
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 3.1e-205 718.8 507 75.5
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 3.1e-205 718.8 587 65.2
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 9.1e-205 717.2 510 72.5
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 9.1e-205 717.2 499 74.3
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 3.4e-204 715.3 522 70.9
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.4e-204 715.3 516 71.7
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.7e-203 713.0 499 74.5
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.7e-203 713.0 500 71.4
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.8e-203 711.8 507 73.0
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 8.5e-203 710.7 500 73.0
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 1.6e-201 706.4 499 73.1
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 4.7e-201 704.9 507 72.2
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.1e-201 704.5 507 72.0
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 2.3e-200 702.6 512 71.3
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 4.2e-194 681.8 590 64.1
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 2.7e-193 679.1 448 76.3
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 2.2e-190 669.5 506 67.4
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 4.8e-190 668.3 507 66.7
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 2.1e-185 652.9 470 71.5
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.7e-185 652.5 499 69.3
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.3e-182 643.7 500 65.8
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.0e-180 636.3 424 77.1
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 1.4e-173 613.6 362 88.7
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 3.8e-171 605.5 508 61.2
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 3.8e-171 605.5 508 61.2
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 4.9e-166 588.6 431 70.1
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 5.9e-164 581.6 449 66.4
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 7.5e-159 564.7 432 68.5
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.4e-157 560.5 517 57.4
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 2.0e-156 556.6 485 60.2
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 6.4e-150 535.0 371 72.0
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 3.5e-148 529.3 359 74.7
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 2.6e-143 513.1 340 76.8
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 7.3e-138 495.0 334 76.3
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.9e-133 480.3 321 76.9
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.4e-112 411.0 247 80.2
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.4e-112 410.2 247 80.2
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 2.7e-108 396.7 515 45.4
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 1.8e-104 384.0 412 57.0
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 1.1e-101 374.8 487 44.4
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 9.7e-98 361.7 240 76.2
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 9.1e-88 328.6 489 40.7
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 2.0e-74 284.3 171 84.2
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 3.8e-70 270.0 306 52.0
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 6.1e-52 209.5 124 86.3
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 8.0e-52 209.1 494 34.4
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 4.9e-49 199.9 197 55.8
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 4.9e-49 199.9 478 35.1
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.3e-46 191.0 497 32.4
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-39 167.9 294 41.2
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 2.3e-38 164.5 445 33.0
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 6.2e-36 156.4 115 69.6
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 4.4e-34 150.2 456 33.3
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 3.7e-33 147.1 452 32.7
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 5.1e-30 136.7 277 39.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 6.6e-30 136.3 277 38.6
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 7.3e-29 132.9 86 72.1
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 2.8e-28 131.0 302 34.1
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 8.9e-27 125.9 341 34.3
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 9.9e-26 122.5 220 43.6
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 4.1e-24 117.1 194 43.8
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 7.8e-23 112.8 323 28.5
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-21 107.8 208 42.8
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 3.3e-21 107.5 142 48.6
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 7.3e-21 106.3 63 81.0
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 9.6e-21 105.9 74 67.6
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 2.8e-20 104.4 332 28.6
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-20 104.0 352 31.2
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-19 102.4 142 47.2
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-19 101.7 194 41.8
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 4.0e-19 100.5 239 31.0
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.8e-19 99.8 360 30.6
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 4.2e-16 90.5 426 28.9
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 4.6e-15 87.0 426 28.4
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.5e-13 82.0 327 29.1
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 5.6e-13 80.1 245 33.1
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 3.1e-11 74.3 179 35.2


User provided reference genes

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