Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 2.1e-138 496.1 335 100.0
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 3.4e-72 276.2 355 58.9
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 3.9e-68 262.7 174 78.7
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.1e-65 254.6 303 51.8
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 1.5e-64 250.8 150 82.7
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 7.6e-64 248.4 151 83.4
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.1e-62 244.6 161 77.6
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.4e-62 244.2 277 52.0
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 2.4e-62 243.4 162 76.5
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 2.4e-62 243.4 151 80.8
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.6e-61 240.7 172 72.7
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 3.5e-61 239.6 151 79.5
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 3.5e-61 239.6 145 83.4
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 6.0e-61 238.8 167 71.3
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.0e-60 238.0 162 74.1
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 3.0e-60 236.5 157 77.1
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 3.9e-60 236.1 353 47.0
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 5.1e-60 235.7 163 74.8
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 6.6e-60 235.3 278 50.4
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 2.5e-59 233.4 162 74.1
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.5e-59 233.4 165 72.7
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 2.5e-59 233.4 348 46.0
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 4.3e-59 232.6 151 76.8
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 5.6e-59 232.3 165 72.1
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 5.6e-59 232.3 144 80.6
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 9.6e-59 231.5 162 75.3
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.2e-58 231.1 172 71.5
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.6e-58 230.7 165 72.1
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 2.1e-58 230.3 151 77.5
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 2.8e-58 229.9 157 73.2
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.6e-58 229.6 341 44.6
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 6.2e-58 228.8 150 74.0
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 1.4e-57 227.6 151 76.2
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 1.8e-57 227.3 156 75.6
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.8e-57 227.3 164 73.2
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 3.1e-57 226.5 174 69.5
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.1e-57 226.5 172 68.0
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.1e-57 226.5 172 68.0
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 4.0e-57 226.1 174 68.4
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 4.0e-57 226.1 172 69.8
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 5.2e-57 225.7 150 77.3
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 9.0e-57 224.9 156 72.4
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 9.0e-57 224.9 328 45.4
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 1.5e-56 224.2 150 76.7
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 2.0e-56 223.8 151 74.8
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 3.4e-56 223.0 152 76.3
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 5.8e-56 222.2 173 68.8
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 9.9e-56 221.5 165 72.1
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.3e-55 221.1 152 74.3
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 2.2e-55 220.3 155 73.5
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 2.9e-55 219.9 162 69.1
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 2.9e-55 219.9 150 72.7
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 3.8e-55 219.5 151 73.5
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 3.8e-55 219.5 159 71.1
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 4.9e-55 219.2 152 73.7
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.4e-54 217.6 354 53.4
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 5.4e-54 215.7 153 71.9
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 7.1e-54 215.3 163 69.9
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 7.1e-54 215.3 155 71.6
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 7.1e-54 215.3 151 71.5
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 9.3e-54 214.9 149 73.2
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 1.2e-53 214.5 156 71.2
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.6e-53 214.2 153 71.9
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.6e-53 214.2 163 67.5
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 1.6e-53 214.2 134 79.9
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 2.7e-53 213.4 153 69.3
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 6.0e-53 212.2 162 69.8
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 7.8e-53 211.8 155 70.3
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.0e-52 211.5 166 66.9
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.0e-52 211.5 155 71.0
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.3e-52 211.1 132 81.1
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 1.7e-52 210.7 156 69.9
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.7e-52 210.7 150 72.0
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.7e-52 210.7 150 72.0
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.7e-52 210.7 150 72.0
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.7e-52 210.7 150 72.0
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 3.0e-52 209.9 156 68.6
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 3.0e-52 209.9 134 76.9
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 5.1e-52 209.1 151 70.9
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 6.6e-52 208.8 153 71.9
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 8.7e-52 208.4 148 70.9
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 1.1e-51 208.0 133 77.4
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 3.3e-51 206.5 159 69.2
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.3e-51 206.5 159 69.2
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 3.3e-51 206.5 150 68.7
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 5.6e-51 205.7 154 67.5
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 7.3e-51 205.3 157 68.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.3e-50 204.5 132 75.0
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 4.8e-50 202.6 140 75.0
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 4.8e-50 202.6 149 71.8
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 6.2e-50 202.2 176 61.9
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 8.1e-50 201.8 156 66.0
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 8.1e-50 201.8 189 59.8
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 1.1e-49 201.4 153 69.3
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 1.4e-49 201.1 153 68.6
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 1.8e-49 200.7 156 67.3
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 1.8e-49 200.7 169 66.9
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.1e-49 199.9 157 68.8
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.1e-49 199.9 157 68.8
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 5.3e-49 199.1 132 76.5
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 6.9e-49 198.7 142 71.8
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 9.0e-49 198.4 151 65.6
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.6e-48 196.8 132 73.5
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 4.5e-48 196.1 136 73.5
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 5.8e-48 195.7 172 64.0
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.3e-47 194.5 163 66.3
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.9e-47 193.4 165 64.2
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.2e-46 189.9 130 73.1
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 5.4e-46 189.1 150 66.7
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 7.1e-46 188.7 158 67.1
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 7.1e-46 188.7 161 64.0
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 4.6e-45 186.0 132 72.0
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 4.6e-45 186.0 132 72.0
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 6.0e-45 185.7 148 66.2
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.8e-44 184.1 134 70.1
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 6.7e-44 182.2 160 61.2
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 8.7e-44 181.8 136 67.6
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 3.1e-41 173.3 136 68.4
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 4.0e-41 172.9 160 58.8
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.3e-41 172.6 141 64.5
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 3.4e-40 169.9 142 64.1
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 4.9e-39 166.0 122 68.9
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 3.2e-38 163.3 132 65.9
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 2.1e-37 160.6 132 62.1
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 6.0e-37 159.1 130 66.2
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 4.3e-35 152.9 180 50.6
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.4e-33 147.9 144 59.0
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.5e-32 144.4 138 56.5
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.4e-30 137.9 102 71.6
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.5e-30 137.1 110 60.0
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 7.1e-30 135.6 105 66.7
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.2e-29 134.8 132 53.0
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 7.4e-27 125.6 164 45.7
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 1.8e-25 120.9 89 69.7
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 8.8e-20 102.1 136 42.6
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 1.9e-19 100.9 65 80.0
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.7e-18 97.8 117 45.3
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 3.4e-16 90.1 133 39.1
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 4.5e-16 89.7 138 42.0
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 2.9e-15 87.0 100 55.0
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 1.1e-14 85.1 83 60.2
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 2.0e-11 74.3 161 33.5
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 1.3e-10 71.6 135 34.1
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 8.2e-10 68.9 57 61.4
PRCOL_00005361 Prasinoderma coloniale HOM05D005159 ORTHO05D006237 9.4e-06 55.5 144 29.9


User provided reference genes

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