Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 2.2e-280 968.4 505 100.0
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 1.0e-136 491.1 345 69.6
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 4.1e-130 469.2 334 69.5
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 4.1e-122 442.6 345 67.2
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 4.7e-118 429.1 306 70.3
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 9.2e-114 414.8 351 59.3
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 1.6e-113 414.1 343 60.3
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 2.0e-113 413.7 353 60.1
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 2.7e-113 413.3 339 62.8
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 4.6e-113 412.5 351 59.5
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 3.9e-112 409.5 353 59.8
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.9e-111 407.1 352 58.5
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 2.8e-110 403.3 370 57.0
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 8.9e-109 398.3 358 58.1
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 2.6e-108 396.7 355 58.0
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 9.8e-108 394.8 294 65.0
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.1e-106 391.3 321 60.4
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 2.4e-106 390.2 355 56.9
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 7.1e-106 388.7 346 57.2
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 9.2e-106 388.3 354 55.6
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 6.0e-105 385.6 297 65.0
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 2.3e-104 383.6 369 55.6
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 4.3e-103 379.4 349 57.0
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 5.6e-103 379.0 309 60.2
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 6.2e-102 375.6 331 56.8
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 3.1e-101 373.2 350 56.3
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 6.8e-101 372.1 337 57.0
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 6.8e-101 372.1 344 55.8
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 6.8e-101 372.1 344 55.2
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 7.6e-100 368.6 344 56.4
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 1.7e-99 367.5 344 53.8
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 8.4e-99 365.2 327 56.0
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 8.4e-99 365.2 333 57.1
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 1.1e-98 364.8 356 52.8
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 1.4e-98 364.4 299 59.5
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 1.4e-98 364.4 360 52.5
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 2.4e-98 363.6 318 56.3
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 3.2e-98 363.2 346 55.2
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 5.4e-98 362.5 300 60.0
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 1.6e-97 360.9 363 51.8
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 4.6e-97 359.4 298 59.4
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 6.0e-97 359.0 348 54.3
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 6.0e-97 359.0 318 56.9
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.0e-96 358.2 358 51.1
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 1.7e-96 357.5 300 60.0
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 1.1e-95 354.8 300 57.7
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.5e-95 354.4 333 54.7
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 1.9e-95 354.0 348 54.0
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 3.3e-95 353.2 297 58.2
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 4.3e-95 352.8 350 54.0
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 4.3e-95 352.8 299 55.9
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 4.3e-95 352.8 346 54.3
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 9.6e-95 351.7 349 52.4
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 3.6e-94 349.7 351 53.8
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 3.6e-94 349.7 337 54.0
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 4.7e-94 349.4 346 52.6
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 6.2e-94 349.0 318 54.7
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 2.4e-93 347.1 352 50.9
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 1.5e-92 344.4 348 53.4
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 2.0e-92 344.0 329 53.8
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 7.6e-92 342.0 331 55.0
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 9.9e-92 341.7 273 61.5
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 2.2e-91 340.5 297 55.6
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 8.4e-91 338.6 365 50.7
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 1.1e-90 338.2 246 65.4
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 1.9e-90 337.4 294 58.5
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 1.9e-90 337.4 351 53.3
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 2.4e-90 337.0 331 54.7
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 7.1e-90 335.5 308 53.2
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 9.3e-90 335.1 332 54.5
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 1.2e-89 334.7 338 53.8
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 3.5e-89 333.2 331 54.4
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 3.5e-89 333.2 336 50.6
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 6.6e-88 328.9 350 49.4
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.5e-87 327.8 298 57.0
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 9.6e-87 325.1 319 56.1
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 9.6e-87 325.1 290 54.8
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 3.6e-86 323.2 321 53.0
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 1.8e-85 320.9 275 57.1
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.1e-85 320.1 343 51.0
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 5.8e-84 315.8 313 52.7
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 7.6e-84 315.5 351 47.6
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 1.3e-83 314.7 271 57.6
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 2.2e-83 313.9 255 60.0
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 6.4e-83 312.4 299 55.5
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 9.3e-82 308.5 337 49.6
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 1.3e-80 304.7 359 48.7
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.1e-79 301.6 240 61.7
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.5e-79 301.2 359 45.7
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 9.6e-79 298.5 240 61.2
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 2.2e-75 287.3 245 57.6
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 2.9e-75 287.0 301 50.2
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 4.2e-74 283.1 297 49.8
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 2.1e-73 280.8 238 59.7
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 2.4e-69 267.3 189 67.7
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 1.2e-68 265.0 398 39.4
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 6.3e-62 242.7 310 45.8
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 8.2e-62 242.3 315 43.8
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 1.0e-56 225.3 320 42.2
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 3.9e-56 223.4 219 51.6
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.2e-52 211.8 296 41.2
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 5.1e-48 196.4 308 40.6
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 5.7e-47 193.0 277 39.7
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 8.5e-43 179.1 348 33.9
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 3.2e-42 177.2 164 56.1
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 6.1e-41 172.9 384 33.1
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 3.0e-32 144.1 188 40.4
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 2.8e-30 137.5 226 37.2
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.1e-29 135.6 108 58.3
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 1.2e-23 115.5 227 33.9
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 6.5e-19 99.8 167 37.1
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 6.5e-19 99.8 107 46.7
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.4e-16 92.0 155 34.2
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 7.0e-13 79.7 106 36.8


User provided reference genes

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