Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00792 Erythranthe guttata HOM05D006593 ORTHO05D008512 0.0e+00 1197.2 631 100.0
SalBow5G0109 Salvia bowleyana HOM05D006593 ORTHO05D008512 4.7e-224 781.6 704 63.5
SGA_v2.0_scaffold45G17238 Striga asiatica HOM05D006593 ORTHO05D008512 2.7e-216 755.7 619 66.2
Oeu012466.1 Olea europaea HOM05D006593 ORTHO05D008512 5.2e-199 698.4 693 57.4
Dinv01622 Davidia involucrata HOM05D006593 ORTHO05D008512 3.1e-183 646.0 689 54.0
unitig_748.g8644 Utricularia gibba HOM05D006593 ORTHO05D008512 8.9e-183 644.4 677 55.1
CSS0021282 Camellia sinensis var. sinensis HOM05D006593 ORTHO05D008512 1.2e-182 644.0 694 53.9
Rhsim10G0172300 Rhododendron simsii HOM05D006593 ORTHO05D008512 3.9e-178 629.0 687 52.4
Actinidia06518 Actinidia chinensis HOM05D006593 ORTHO05D008512 1.8e-175 620.2 696 51.7
Sopen11g005350 Solanum pennellii HOM05D006593 ORTHO05D008512 3.0e-170 602.8 682 52.3
Solyc11g010550.2 Solanum lycopersicum HOM05D006593 ORTHO05D008512 6.6e-170 601.7 682 52.3
PGSC0003DMG400016138 Solanum tuberosum HOM05D006593 ORTHO05D008512 8.7e-170 601.3 680 52.6
CiPaw.07G048200 Carya illinoinensis HOM05D006593 ORTHO05D008512 2.5e-169 599.7 691 49.9
Atru.chr3.1259 Acer truncatum HOM05D006593 ORTHO05D008512 3.3e-169 599.4 686 50.3
MD15G1313700 Malus domestica HOM05D006593 ORTHO05D008512 7.3e-169 598.2 692 50.7
QL06p035616 Quercus lobata HOM05D006593 ORTHO05D008512 6.2e-168 595.1 692 51.0
Haze_03860 Corylus avellana HOM05D006593 ORTHO05D008512 4.0e-167 592.4 713 50.6
Manes.13G098700 Manihot esculenta HOM05D006593 ORTHO05D008512 9.0e-167 591.3 689 51.7
RcHm_v2.0_Chr2g0111321 Rosa chinensis HOM05D006593 ORTHO05D008512 3.4e-166 589.3 683 49.8
Potri.007G010600 Populus trichocarpa HOM05D006593 ORTHO05D008512 7.6e-166 588.2 692 51.6
FAN28G2735 Fragaria x ananassa HOM05D006593 ORTHO05D008512 9.9e-166 587.8 686 50.3
FAN19G1905 Fragaria x ananassa HOM05D006593 ORTHO05D008512 2.2e-165 586.6 684 50.3
TAR628G0061 Trochodendron aralioides HOM05D006593 ORTHO05D008512 3.8e-165 585.9 692 50.0
Sabra07G0008000 Salix brachista HOM05D006593 ORTHO05D008512 4.9e-165 585.5 688 51.3
Nitab4.5_0004153g0020 Nicotiana tabacum HOM05D006593 ORTHO05D008512 2.4e-164 583.2 683 50.7
Cc07_g14190 Coffea canephora HOM05D006593 ORTHO05D008512 2.7e-163 579.7 686 50.0
PSO170G1479 Papaver somniferum HOM05D006593 ORTHO05D008512 3.9e-162 575.9 686 49.4
Nitab4.5_0001468g0100 Nicotiana tabacum HOM05D006593 ORTHO05D008512 5.1e-162 575.5 681 49.9
Sed0000560 Sechium edule HOM05D006593 ORTHO05D008512 1.5e-161 573.9 681 48.6
Lju188A1G72 Lonicera japonica HOM05D006593 ORTHO05D008512 3.3e-161 572.8 618 51.3
PSO017G0451 Papaver somniferum HOM05D006593 ORTHO05D008512 4.3e-161 572.4 689 49.1
Glyma.01G023700 Glycine max HOM05D006593 ORTHO05D008512 4.8e-160 568.9 683 47.3
Thecc.01G091500 Theobroma cacao HOM05D006593 ORTHO05D008512 4.8e-160 568.9 685 50.4
TPR.G29973 Trifolium pratense HOM05D006593 ORTHO05D008512 6.2e-160 568.5 692 48.1
TWI53G0534 Tripterygium wilfordii HOM05D006593 ORTHO05D008512 6.2e-160 568.5 685 49.9
Duzib147G0804 Durio zibethinus HOM05D006593 ORTHO05D008512 1.1e-159 567.8 674 49.6
CANSAT01G0713 Cannabis sativa HOM05D006593 ORTHO05D008512 1.4e-159 567.4 696 49.9
DCAR_014189 Daucus carota HOM05D006593 ORTHO05D008512 1.4e-159 567.4 641 51.5
CsaV3_6G045050 Cucumis sativus L. HOM05D006593 ORTHO05D008512 1.8e-159 567.0 685 49.3
Medtr5g032210 Medicago truncatula HOM05D006593 ORTHO05D008512 9.0e-159 564.7 682 49.1
COL.COLO4_27348 Corchorus olitorius HOM05D006593 ORTHO05D008512 4.5e-158 562.4 683 48.8
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 9.9e-158 561.2 631 51.7
Lj2g0020402 Lotus japonicus HOM05D006593 ORTHO05D008512 1.7e-157 560.5 683 48.8
Aqoxy5G01304_Aqoxy5G01305 Aquilegia oxysepala HOM05D006593 ORTHO05D008512 2.4e-156 556.6 697 48.2
Nn5g29896 Nelumbo nucifera HOM05D006593 ORTHO05D008512 5.4e-156 555.4 687 47.9
vmacro13002 Vaccinium macrocarpon HOM05D006593 ORTHO05D008512 2.1e-155 553.5 730 45.9
Ciclev10003755m.g Citrus clementina HOM05D006593 ORTHO05D008512 1.8e-154 550.4 685 48.2
Ah.02g123650 Amaranthus hybridus HOM05D006593 ORTHO05D008512 5.6e-153 545.4 677 49.0
EL10Ac6g15212 Beta vulgaris HOM05D006593 ORTHO05D008512 1.6e-152 543.9 690 49.3
A09p57440 Brassica napus HOM05D006593 ORTHO05D008512 1.8e-151 540.4 660 50.0
BraA09t41136Z Brassica rapa HOM05D006593 ORTHO05D008512 1.8e-151 540.4 660 50.0
THA.LOC104824911 Tarenaya hassleriana HOM05D006593 ORTHO05D008512 1.8e-151 540.4 683 48.2
Thhalv10000032m.g Eutrema salsugineum HOM05D006593 ORTHO05D008512 9.0e-151 538.1 675 48.3
BcaB08g35096 Brassica carinata HOM05D006593 ORTHO05D008512 1.2e-150 537.7 659 49.3
AUR62017964 Chenopodium quinoa HOM05D006593 ORTHO05D008512 3.4e-150 536.2 686 48.4
Sp4g01570 Schrenkiella parvula HOM05D006593 ORTHO05D008512 5.8e-150 535.4 663 48.0
AL4G12066 Arabidopsis lyrata HOM05D006593 ORTHO05D008512 7.6e-150 535.0 662 49.1
BolC8t51623H Brassica oleracea HOM05D006593 ORTHO05D008512 7.6e-150 535.0 660 49.8
Prupe.6G198700 Prunus persica HOM05D006593 ORTHO05D008512 2.9e-149 533.1 692 46.5
AUR62003656 Chenopodium quinoa HOM05D006593 ORTHO05D008512 4.9e-149 532.3 688 48.5
PGR031G1437 Punica granatum HOM05D006593 ORTHO05D008512 4.9e-149 532.3 679 47.6
arahy.Tifrunner.gnm1.ann1.67PG0W Arachis hypogaea HOM05D006593 ORTHO05D008512 6.4e-149 531.9 702 46.3
arahy.Tifrunner.gnm1.ann1.ZAKH7Z Arachis hypogaea HOM05D006593 ORTHO05D008512 6.4e-149 531.9 702 46.3
BcaC07g41050 Brassica carinata HOM05D006593 ORTHO05D008512 2.5e-148 530.0 660 49.8
C08p40530 Brassica napus HOM05D006593 ORTHO05D008512 2.5e-148 530.0 660 49.8
Gorai.003G043400 Gossypium raimondii HOM05D006593 ORTHO05D008512 2.5e-148 530.0 682 47.4
Eucgr.I00552 Eucalyptus grandis HOM05D006593 ORTHO05D008512 7.1e-148 528.5 693 46.6
Gohir.D03G042700 Gossypium hirsutum HOM05D006593 ORTHO05D008512 9.3e-148 528.1 683 47.1
AT2G22530 Arabidopsis thaliana HOM05D006593 ORTHO05D008512 1.2e-147 527.7 662 48.9
Gohir.A02G131300 Gossypium hirsutum HOM05D006593 ORTHO05D008512 1.2e-147 527.7 683 47.1
Cpa.g.sc55.33 Carica papaya HOM05D006593 ORTHO05D008512 2.3e-146 523.5 667 47.4
Peaxi162Scf00778g00014 Petunia axillaris HOM05D006593 ORTHO05D008512 1.1e-145 521.2 652 49.5
Psat2g085480 Pisum sativum HOM05D006593 ORTHO05D008512 2.5e-145 520.0 689 45.9
HanXRQChr17g0550591 Helianthus annuus HOM05D006593 ORTHO05D008512 9.6e-145 518.1 605 50.4
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 3.7e-144 516.2 681 47.3
Lsat_1_v5_gn_3_61401 Lactuca sativa HOM05D006593 ORTHO05D008512 4.5e-142 509.2 635 49.4
Hund16537 Selenicereus undatus HOM05D006593 ORTHO05D008512 1.7e-141 507.3 684 45.8
Carub.0004s0170 Capsella rubella HOM05D006593 ORTHO05D008512 1.9e-140 503.8 639 48.7
CAN.G1843.3 Capsicum annuum HOM05D006593 ORTHO05D008512 4.3e-137 492.7 673 46.7
ATR0665G270 Amborella trichopoda HOM05D006593 ORTHO05D008512 8.2e-136 488.4 692 45.7
FAN26G1425 Fragaria x ananassa HOM05D006593 ORTHO05D008512 5.1e-130 469.2 670 44.2
Zm00001eb257050 Zea mays HOM05D006593 ORTHO05D008512 2.0e-129 467.2 692 41.3
Os02g0781600 Oryza sativa ssp. japonica HOM05D006593 ORTHO05D008512 2.2e-128 463.8 698 42.1
Cfa006891 Carpinus fangiana HOM05D006593 ORTHO05D008512 3.9e-122 443.0 561 47.8
Eucgr.I00548 Eucalyptus grandis HOM05D006593 ORTHO05D008512 1.7e-120 437.6 684 42.0
FvH4_1g19740 Fragaria vesca HOM05D006593 ORTHO05D008512 1.4e-119 434.5 557 46.3
Phvul.002G147900 Phaseolus vulgaris HOM05D006593 ORTHO05D008512 4.7e-115 419.5 547 44.8
VMungo1215G1341 Vigna mungo HOM05D006593 ORTHO05D008512 6.1e-107 392.5 540 42.8
Lalb_Chr05g0216291 Lupinus albus HOM05D006593 ORTHO05D008512 4.1e-103 379.8 524 44.1
Ca_04534_v3 Cicer arietinum L. HOM05D006593 ORTHO05D008512 4.5e-102 376.3 622 38.3
Eucgr.I00472 Eucalyptus grandis HOM05D006593 ORTHO05D008512 4.0e-98 363.2 502 46.6
Pp3c8_800 Physcomitrium patens HOM05D006593 ORTHO05D008512 4.8e-96 356.3 741 34.7
Mapoly0005s0227 Marchantia polymorpha HOM05D006593 ORTHO05D008512 1.0e-90 338.6 741 33.9
SEGI_04856 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 2.3e-90 337.4 639 36.6
SEGI_21075 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 2.3e-90 337.4 639 36.6
HPP92_005969 Vanilla planifolia HOM05D006593 ORTHO05D008512 2.0e-65 254.6 345 45.8
HPP92_005976 Vanilla planifolia HOM05D006593 ORTHO05D008512 2.0e-65 254.6 345 45.8
MELO3C007718.2 Cucumis melo HOM05D006593 ORTHO05D008512 2.8e-59 234.2 594 31.1
CAN.G1724.3 Capsicum annuum HOM05D006593 ORTHO05D008512 3.6e-51 207.2 626 31.9
CDE03G0370 Ceratophyllum demersum HOM05D006593 ORTHO05D008512 3.6e-51 207.2 276 44.9
CARHR113720 Cardamine hirsuta HOM05D006593 ORTHO05D008512 4.8e-51 206.8 160 69.4
Psat2g043360 Pisum sativum HOM05D006593 ORTHO05D008512 7.1e-47 193.0 288 40.3
MBI06_g07364_MAGBIO Magnolia biondii HOM05D006593 ORTHO05D008512 3.9e-45 187.2 161 60.9
Lalb_Chr05g0216281 Lupinus albus HOM05D006593 ORTHO05D008512 9.9e-41 172.6 159 61.0
GSVIVG01006089001 Vitis vinifera HOM05D006593 ORTHO05D008512 2.9e-40 171.0 129 69.8
Psat0ss25160g0040 Pisum sativum HOM05D000068 ORTHO05D020743 3.8e-32 144.1 163 46.6
GSVIVG01006735001 Vitis vinifera HOM05D006593 ORTHO05D008512 1.9e-28 131.7 187 43.3
GSVIVG01006734001 Vitis vinifera HOM05D006593 ORTHO05D008512 8.4e-24 116.3 75 77.3
CBR_g48853 Chara braunii HOM05D006593 ORTHO05D008512 3.1e-18 97.8 198 35.9
HPP92_005975 Vanilla planifolia HOM05D006593 ORTHO05D008512 1.0e-13 82.8 108 45.4
PGSC0003DMG400019762 Solanum tuberosum HOM05D006593 ORTHO05D008512 3.2e-07 61.2 32 87.5
BraA10t44274Z Brassica rapa HOM05D004630 ORTHO05D005727 1.2e-06 59.3 309 22.0
MBI05_g35190_MAGBIO Magnolia biondii HOM05D004630 ORTHO05D005727 1.2e-06 59.3 688 21.9
Psat6g040440 Pisum sativum HOM05D000610 ORTHO05D004774 2.1e-06 58.5 155 30.3
Thecc.07G164200 Theobroma cacao HOM05D004630 ORTHO05D005727 4.7e-06 57.4 312 25.0
HPP92_005968 Vanilla planifolia HOM05D006593 ORTHO05D008512 4.7e-06 57.4 48 58.3


User provided reference genes

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