Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 1.4e-43 179.1 85 100.0
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 1.6e-18 95.9 85 57.6
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 1.8e-17 92.4 85 58.8
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 2.3e-17 92.0 85 58.8
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 1.5e-16 89.4 85 52.9
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 5.7e-16 87.4 85 56.5
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.7e-16 86.7 85 51.8
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.7e-16 86.7 85 51.8
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 1.6e-15 85.9 85 52.9
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 2.2e-15 85.5 84 51.2
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 6.3e-15 84.0 85 56.5
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 1.4e-14 82.8 81 53.1
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 4.1e-14 81.3 85 55.3
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 5.3e-14 80.9 85 50.6
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 1.2e-13 79.7 87 52.9
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 2.0e-13 79.0 86 55.8
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 2.0e-13 79.0 87 54.0
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 3.4e-13 78.2 85 54.1
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 7.7e-13 77.0 85 50.6
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 1.0e-12 76.6 85 48.2
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 2.2e-12 75.5 86 54.7
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 2.9e-12 75.1 85 49.4
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 8.5e-12 73.6 85 50.6
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 1.1e-11 73.2 85 48.2
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 3.2e-11 71.6 45 68.9
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 5.5e-11 70.9 80 50.0
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 2.1e-10 68.9 47 70.2
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 3.7e-07 58.2 83 39.8
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 6.9e-06 53.9 83 39.8


User provided reference genes

Program Settings