Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 4.3e-133 478.0 247 100.0
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 3.8e-97 358.6 232 82.3
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 5.0e-97 358.2 241 79.7
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 3.1e-91 339.0 236 76.7
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.2e-90 337.0 247 72.5
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 2.7e-90 335.9 238 74.8
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.5e-88 330.1 241 72.6
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.5e-88 330.1 249 72.7
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 2.1e-87 326.2 244 72.1
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 6.1e-87 324.7 247 72.5
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 1.0e-86 323.9 247 70.0
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.8e-86 323.2 239 72.4
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 2.3e-86 322.8 248 69.8
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 3.0e-86 322.4 249 69.1
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 6.8e-86 321.2 241 69.7
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 6.8e-86 321.2 244 69.7
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 8.8e-86 320.9 247 70.0
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 8.8e-86 320.9 241 70.5
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 8.8e-86 320.9 249 71.1
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 1.5e-85 320.1 240 70.4
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 2.6e-85 319.3 247 71.7
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.5e-85 317.8 241 69.3
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 9.8e-85 317.4 236 73.7
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 2.8e-84 315.8 249 69.1
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 2.8e-84 315.8 243 67.9
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 2.8e-84 315.8 247 67.6
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 3.7e-84 315.5 237 69.6
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 3.7e-84 315.5 247 69.2
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 4.9e-84 315.1 247 68.0
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 4.1e-83 312.0 249 67.9
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 4.1e-83 312.0 243 70.0
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 7.0e-83 311.2 242 69.4
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 7.0e-83 311.2 238 70.2
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 7.0e-83 311.2 238 70.2
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 7.0e-83 311.2 240 67.5
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.6e-82 310.1 247 67.2
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.0e-82 309.7 238 69.7
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.0e-82 309.7 238 69.7
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 4.5e-82 308.5 243 68.3
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 4.5e-82 308.5 242 67.8
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 5.9e-82 308.1 247 67.2
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 5.9e-82 308.1 247 66.8
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 5.9e-82 308.1 234 69.7
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 7.7e-82 307.8 224 74.6
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 1.3e-81 307.0 242 68.2
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.3e-81 307.0 227 71.8
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 1.3e-81 307.0 247 67.6
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.7e-81 306.6 242 68.2
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 2.9e-81 305.8 247 67.2
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.8e-81 305.4 242 66.5
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 5.0e-81 305.1 247 66.8
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 5.0e-81 305.1 247 66.4
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 6.6e-81 304.7 243 66.3
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 8.6e-81 304.3 239 69.0
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 2.5e-80 302.8 247 66.0
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 3.3e-80 302.4 242 66.5
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.2e-79 300.4 247 64.0
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 2.1e-79 299.7 231 67.1
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 4.7e-79 298.5 237 65.0
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 4.7e-79 298.5 245 67.3
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 4.7e-79 298.5 241 69.7
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.0e-78 295.4 247 66.0
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 8.9e-78 294.3 206 73.3
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 3.4e-77 292.4 271 60.5
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 4.4e-77 292.0 248 64.9
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 7.5e-77 291.2 235 66.8
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.7e-76 290.0 248 62.5
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 4.9e-76 288.5 248 62.1
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.1e-75 287.3 237 65.4
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 2.0e-74 283.1 226 65.9
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 1.7e-73 280.0 190 73.2
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 2.3e-73 279.6 239 62.3
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 2.9e-73 279.3 237 63.7
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 4.3e-72 275.4 249 63.1
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 3.6e-71 272.3 238 63.9
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 8.0e-71 271.2 249 60.6
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 1.0e-70 270.8 247 59.9
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 4.0e-70 268.9 240 60.4
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 8.9e-70 267.7 188 71.8
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 9.8e-69 264.2 246 60.6
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 5.4e-67 258.5 216 62.5
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 7.0e-67 258.1 243 59.7
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.6e-66 256.9 240 59.2
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 3.3e-64 249.2 247 57.9
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 8.1e-63 244.6 248 57.3
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 9.8e-61 237.7 167 69.5
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 2.9e-60 236.1 236 56.8
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.4e-59 233.8 195 61.0
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 1.9e-59 233.4 221 59.3
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 7.1e-59 231.5 205 60.0
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 9.2e-59 231.1 233 55.4
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 6.0e-58 228.4 229 52.0
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 1.7e-57 226.9 242 56.6
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 9.5e-56 221.1 149 75.2
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 5.8e-53 211.8 157 71.3
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 7.6e-53 211.5 142 72.5
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.7e-49 200.3 141 70.9
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.5e-45 187.2 147 66.7
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 3.4e-45 186.0 123 77.2
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 6.4e-44 181.8 242 49.2
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 3.5e-42 176.0 95 85.3
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 1.3e-41 174.1 201 46.3
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 8.7e-41 171.4 217 42.9
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 8.7e-41 171.4 183 48.6
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 1.9e-40 170.2 186 48.9
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 5.6e-40 168.7 230 47.4
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 8.4e-36 154.8 137 60.6
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.9e-35 153.7 149 49.0
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.1e-32 144.4 137 57.7
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 1.2e-29 134.4 159 43.4
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 3.9e-25 119.4 242 40.5
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 9.0e-22 108.2 101 60.4
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 5.5e-19 99.0 57 82.5
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 6.0e-18 95.5 97 53.6
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 7.6e-13 78.6 159 30.2
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 3.2e-11 73.2 138 25.4
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 1.0e-09 68.2 137 36.5
Cre03.g146167 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D008890 1.1e-08 64.7 192 30.2


User provided reference genes

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