Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.7e-157 559.3 289 100.0
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 5.0e-72 275.4 319 51.7
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 3.9e-69 265.8 269 56.1
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 3.7e-67 259.2 301 52.8
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.1e-66 256.1 259 55.6
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 3.1e-66 256.1 236 63.6
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 5.3e-66 255.4 272 52.6
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 9.1e-66 254.6 260 55.0
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.2e-65 254.2 191 67.5
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 1.2e-65 254.2 191 67.5
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 5.9e-65 251.9 268 52.6
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 5.9e-65 251.9 316 48.1
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 7.7e-65 251.5 284 51.8
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.0e-64 251.1 269 55.0
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 5.0e-64 248.8 259 52.9
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 6.5e-64 248.4 198 65.2
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.2e-63 246.1 274 51.1
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 5.5e-63 245.4 288 52.1
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.2e-63 245.0 286 48.6
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 9.4e-63 244.6 317 48.9
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.2e-62 244.2 260 54.6
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.6e-62 243.8 306 50.3
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.6e-62 243.8 262 52.7
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.6e-62 243.8 264 54.9
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 2.1e-62 243.4 211 62.1
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.7e-62 243.0 215 59.5
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 8.0e-62 241.5 196 63.8
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 8.0e-62 241.5 263 54.0
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.4e-61 240.7 249 55.8
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 3.0e-61 239.6 253 54.5
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 5.2e-61 238.8 298 46.6
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 5.2e-61 238.8 274 52.6
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 5.2e-61 238.8 214 59.3
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 6.8e-61 238.4 255 51.0
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 6.8e-61 238.4 255 51.0
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 8.8e-61 238.0 198 61.1
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 2.0e-60 236.9 268 50.0
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 3.4e-60 236.1 266 48.5
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.4e-60 235.7 274 52.2
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 4.4e-60 235.7 276 48.9
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.3e-59 234.2 264 50.8
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.7e-59 233.8 258 51.6
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.7e-59 233.8 283 51.6
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.2e-59 233.4 284 51.4
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 2.2e-59 233.4 276 50.7
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.8e-59 233.0 250 51.2
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 3.7e-59 232.6 250 51.2
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 3.7e-59 232.6 301 47.2
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.8e-59 232.3 307 45.3
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 6.3e-59 231.9 272 51.5
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 8.3e-59 231.5 269 51.7
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 8.3e-59 231.5 252 52.8
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.1e-58 231.1 265 49.8
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.8e-58 230.3 249 54.2
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.4e-58 229.9 200 59.5
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 3.1e-58 229.6 309 48.5
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.1e-58 229.2 256 51.6
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 9.1e-58 228.0 199 59.8
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 9.1e-58 228.0 251 51.0
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.6e-57 227.3 267 48.7
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.0e-57 226.9 263 49.8
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 4.5e-57 225.7 264 50.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 5.9e-57 225.3 258 51.6
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 7.7e-57 224.9 279 49.1
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 2.9e-56 223.0 202 58.4
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 7.2e-55 218.4 238 55.5
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.0e-53 214.5 231 54.5
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.8e-53 213.8 262 48.9
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.3e-53 213.4 267 47.9
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 3.4e-52 209.5 269 48.0
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 3.7e-51 206.1 248 49.6
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.4e-50 203.4 259 43.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.2e-49 201.1 252 47.6
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 1.6e-49 200.7 306 45.1
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.7e-49 199.9 276 46.7
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 8.6e-48 194.9 213 59.6
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 2.5e-47 193.4 205 48.3
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 4.2e-47 192.6 294 45.2
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 4.2e-47 192.6 350 42.0
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 2.3e-45 186.8 233 49.4
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 2.8e-43 179.9 155 61.9
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.2e-41 174.5 230 47.4
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 1.3e-40 171.0 142 62.7
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 2.9e-40 169.9 219 47.5
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 9.5e-39 164.9 155 58.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.1e-38 163.7 272 39.7
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 4.7e-38 162.5 361 34.3
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 8.3e-35 151.8 235 35.3
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.0e-33 147.1 189 49.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 1.5e-31 141.0 271 33.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.6e-30 137.5 254 38.6
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 6.2e-30 135.6 87 73.6
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.6e-28 130.2 200 39.0
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 7.5e-28 128.6 114 61.4
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 3.2e-26 123.2 86 67.4
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.2e-14 84.7 106 42.5
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.6e-14 84.3 161 35.4
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 2.8e-14 83.6 196 38.8
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 2.6e-12 77.0 194 29.4
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.3e-11 74.7 82 47.6
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 4.9e-11 72.8 197 28.4
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.7e-08 64.3 95 44.2
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 8.1e-06 55.5 43 62.8


User provided reference genes

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