Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 0.0e+00 1410.6 781 100.0
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.1e-294 1015.0 787 72.8
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 1.0e-276 956.8 828 66.4
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.8e-276 954.9 800 66.5
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 5.0e-276 954.5 815 67.4
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 5.0e-268 927.9 820 65.4
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 2.1e-266 922.5 773 66.0
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 3.6e-266 921.8 809 66.4
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.3e-265 919.1 798 64.7
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 2.6e-264 915.6 827 62.2
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.8e-263 912.1 780 65.4
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.4e-262 909.8 815 64.3
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.4e-262 909.8 808 65.0
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 7.0e-262 907.5 859 60.9
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 1.6e-261 906.4 809 62.8
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.0e-261 906.0 816 65.1
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 3.5e-261 905.2 801 64.3
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 7.7e-261 904.0 781 64.9
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 1.0e-260 903.7 799 65.5
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.9e-260 902.1 798 63.7
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.1e-259 900.2 815 63.2
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 1.9e-259 899.4 815 65.2
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 9.4e-259 897.1 815 62.9
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 4.7e-258 894.8 819 62.0
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 8.8e-257 890.6 816 62.7
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 8.8e-257 890.6 816 62.1
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 2.6e-256 889.0 798 62.9
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 5.7e-256 887.9 806 62.8
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 3.7e-255 885.2 829 62.5
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 4.9e-255 884.8 810 64.1
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 8.3e-255 884.0 834 60.7
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 8.3e-255 884.0 823 60.9
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 5.4e-254 881.3 821 62.5
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 5.9e-253 877.9 817 62.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 3.8e-252 875.2 815 61.5
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 2.5e-251 872.5 798 61.0
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.6e-250 868.6 820 62.3
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.8e-249 866.3 797 61.2
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.7e-247 859.8 836 58.6
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.4e-246 856.7 827 61.1
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.4e-246 856.7 799 62.3
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 4.6e-245 851.7 766 65.3
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 5.9e-245 851.3 801 60.3
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.7e-244 849.7 805 61.4
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 7.3e-243 844.3 831 58.5
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 9.5e-243 844.0 803 60.8
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 9.5e-243 844.0 817 61.6
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.2e-242 843.6 787 64.3
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.2e-242 843.6 806 59.9
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.8e-242 842.4 817 60.8
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 3.6e-242 842.0 809 62.3
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 4.7e-242 841.6 816 59.6
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.0e-241 840.5 820 58.4
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.8e-241 839.7 805 62.4
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 2.0e-240 836.3 811 60.5
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 4.4e-240 835.1 791 63.1
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 4.4e-240 835.1 812 60.8
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.7e-239 833.2 811 61.7
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 3.7e-239 832.0 838 60.0
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.4e-238 830.1 831 58.8
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 4.1e-238 828.6 779 61.0
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.6e-237 826.6 789 62.0
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 5.6e-235 818.1 799 60.6
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 7.3e-235 817.8 823 57.4
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 2.8e-234 815.8 809 59.0
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 4.7e-234 815.1 820 57.8
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 4.0e-233 812.0 795 58.9
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.4e-232 808.5 788 61.7
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 6.4e-231 804.7 810 57.4
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 4.1e-230 802.0 810 59.1
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 5.4e-230 801.6 803 59.7
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 1.2e-229 800.4 797 60.6
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 2.7e-229 799.3 807 57.6
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.0e-229 798.1 807 57.7
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 6.6e-228 794.7 777 59.3
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.1e-226 789.6 793 59.3
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.2e-224 783.9 767 60.5
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.3e-223 780.4 801 57.6
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.7e-223 780.0 799 57.2
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.7e-223 778.9 878 55.2
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 2.8e-218 762.7 815 56.7
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 3.4e-216 755.7 789 56.8
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 5.8e-216 755.0 740 60.5
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.1e-214 750.7 795 57.2
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-205 719.9 816 52.5
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 2.7e-205 719.5 692 60.1
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.3e-204 717.2 804 55.5
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.0e-200 703.4 805 55.0
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 1.3e-199 700.7 812 54.7
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 9.3e-198 694.5 773 54.5
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 4.6e-197 692.2 821 53.0
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 4.6e-197 692.2 807 54.2
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 7.9e-197 691.4 821 53.0
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 7.4e-195 684.9 799 54.6
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.3e-194 684.1 640 61.7
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 5.8e-192 675.2 806 53.3
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.3e-191 674.1 801 54.7
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.2e-191 673.3 799 54.2
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.9e-187 660.2 822 49.8
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 9.0e-185 651.4 803 51.3
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.4e-184 649.4 793 52.2
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.4e-182 644.0 777 50.1
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-181 641.0 777 49.9
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.6e-181 640.6 777 50.2
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.7e-181 639.8 785 50.2
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 6.9e-177 625.2 922 44.0
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 6.1e-173 612.1 809 50.1
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 5.3e-169 599.0 805 45.1
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 2.5e-166 590.1 639 58.8
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.3e-164 583.6 818 45.7
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 7.0e-161 572.0 735 49.7
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 9.4e-158 561.6 438 66.7
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.7e-154 550.8 585 60.9
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 2.8e-146 523.5 723 45.8
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.2e-139 501.5 710 45.5
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 6.3e-138 495.7 693 46.3
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.4e-129 468.0 470 58.9
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 4.3e-126 456.4 881 39.8
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 4.3e-126 456.4 544 55.7
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.2e-121 440.3 840 39.8
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.9e-118 431.0 514 56.4
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 8.1e-117 425.6 475 59.6
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 5.2e-116 422.9 518 51.9
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 4.4e-115 419.9 350 65.1
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 8.1e-109 399.1 315 67.0
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 1.2e-104 385.2 428 55.8
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 1.8e-100 371.3 811 36.1
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.1e-100 370.5 276 69.9
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 1.1e-97 362.1 458 46.1
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 9.9e-91 339.0 535 41.5
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 3.2e-89 334.0 768 34.4
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 1.3e-85 322.0 907 32.4
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 3.7e-85 320.5 548 37.8
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 9.3e-81 305.8 676 37.1
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 1.6e-80 305.1 446 45.7
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.1e-54 219.2 357 47.9
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.1e-54 219.2 770 28.6
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.0e-51 208.4 331 48.6
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.7e-48 197.2 382 42.9
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 8.8e-47 193.0 134 73.1
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 4.8e-45 187.2 166 65.7
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-40 171.8 379 37.7
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.8e-31 139.8 328 36.3
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-30 138.7 308 38.3
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 2.6e-30 138.3 137 53.3
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 3.1e-28 131.3 221 43.9
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.9e-26 124.8 133 56.4
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 3.8e-26 124.4 143 51.7
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 2.0e-22 112.1 103 58.3
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 7.5e-22 110.2 96 61.5
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.8e-21 108.2 102 57.8
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.6e-19 102.4 86 59.3
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.5e-19 100.9 81 63.0
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-18 98.6 142 43.7
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.8e-18 97.8 326 33.1
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-16 92.8 201 38.3
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-15 89.7 282 32.3
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 3.0e-15 88.2 137 43.8
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.6e-14 85.1 137 43.8
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.5e-14 83.6 73 57.5
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.8e-14 83.2 278 34.5
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.4e-12 78.6 71 62.0
Migut.O00514 Erythranthe guttata HOM05D001359 ORTHO05D001200 1.6e-11 75.9 68 69.1
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.6e-11 74.3 237 30.8
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.8e-11 73.6 76 52.6
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 8.6e-10 70.1 91 47.3
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 2.5e-09 68.6 102 45.1
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.3e-09 68.2 135 37.8
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.6e-09 67.4 65 56.9
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.2e-08 66.2 41 75.6
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 1.6e-08 65.9 127 40.9
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 2.8e-08 65.1 89 48.3
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 1.8e-07 62.4 51 64.7
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.8e-07 62.4 57 61.4
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 2.3e-07 62.0 55 54.5
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.1e-07 61.6 80 41.2
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 5.2e-07 60.8 91 47.3
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-06 59.7 266 29.3
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-06 58.9 316 27.8
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 2.6e-06 58.5 56 55.4
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.4e-06 57.8 126 36.5
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 9.8e-06 56.6 41 75.6


User provided reference genes

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