Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 9.8e-47 189.9 103 100.0
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 2.3e-32 142.1 103 76.7
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 6.8e-32 140.6 102 77.5
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 1.3e-30 136.3 100 79.0
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 4.6e-28 127.9 87 78.2
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 6.0e-28 127.5 95 73.7
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 3.0e-27 125.2 106 67.9
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 3.9e-27 124.8 91 73.6
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 5.1e-27 124.4 108 67.6
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 8.6e-27 123.6 89 73.0
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 1.1e-26 123.2 87 77.0
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 1.1e-26 123.2 89 73.0
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 4.3e-26 121.3 89 71.9
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 4.3e-26 121.3 89 73.0
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 7.3e-26 120.6 102 65.7
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 1.6e-25 119.4 94 71.3
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.6e-25 119.4 92 72.8
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.6e-25 119.4 100 71.0
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.1e-25 119.0 100 71.0
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.1e-25 119.0 100 71.0
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.1e-25 119.0 100 71.0
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 3.6e-25 118.2 102 64.7
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 3.6e-25 118.2 90 72.2
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 3.6e-25 118.2 89 74.2
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.7e-25 117.9 100 71.0
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 6.2e-25 117.5 100 70.0
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 8.1e-25 117.1 93 69.9
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 8.1e-25 117.1 83 78.3
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 1.1e-24 116.7 99 62.6
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 1.1e-24 116.7 88 72.7
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.4e-24 116.3 83 77.1
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 1.4e-24 116.3 85 72.9
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 1.8e-24 115.9 83 78.3
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 1.8e-24 115.9 85 72.9
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 2.4e-24 115.5 84 72.6
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 4.0e-24 114.8 88 71.6
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 4.0e-24 114.8 88 70.5
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 5.2e-24 114.4 88 71.6
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 5.2e-24 114.4 79 75.9
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 6.8e-24 114.0 86 72.1
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 6.8e-24 114.0 83 75.9
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 8.9e-24 113.6 102 62.7
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 8.9e-24 113.6 93 69.9
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 1.2e-23 113.2 83 75.9
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.2e-23 113.2 83 75.9
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.2e-23 113.2 83 75.9
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 1.5e-23 112.8 91 67.0
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 1.5e-23 112.8 100 62.0
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 2.0e-23 112.5 86 70.9
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 2.0e-23 112.5 83 74.7
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 2.0e-23 112.5 90 72.2
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-23 112.5 96 69.8
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 2.6e-23 112.1 80 76.2
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 3.4e-23 111.7 81 77.8
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 3.4e-23 111.7 81 75.3
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 4.4e-23 111.3 86 68.6
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 5.8e-23 110.9 83 73.5
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 7.6e-23 110.5 83 72.3
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 7.6e-23 110.5 102 65.7
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 7.6e-23 110.5 81 75.3
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 9.9e-23 110.2 79 75.9
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 9.9e-23 110.2 86 70.9
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.3e-22 109.8 81 76.5
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 1.3e-22 109.8 81 74.1
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.7e-22 109.4 98 66.3
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 2.2e-22 109.0 83 69.9
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 2.2e-22 109.0 79 74.7
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 2.2e-22 109.0 83 73.5
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 2.2e-22 109.0 113 59.3
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 2.9e-22 108.6 81 71.6
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 2.9e-22 108.6 81 75.3
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 3.8e-22 108.2 83 73.5
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 4.9e-22 107.8 104 63.5
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 6.4e-22 107.5 80 72.5
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 6.4e-22 107.5 104 62.5
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 1.4e-21 106.3 86 68.6
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 2.4e-21 105.5 83 71.1
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 2.4e-21 105.5 83 68.7
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 2.4e-21 105.5 113 57.5
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 3.2e-21 105.1 98 62.2
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 4.2e-21 104.8 78 73.1
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 5.4e-21 104.4 82 70.7
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 9.2e-21 103.6 98 64.3
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 9.2e-21 103.6 98 64.3
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 9.2e-21 103.6 76 76.3
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 9.2e-21 103.6 76 76.3
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 9.2e-21 103.6 98 61.2
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 9.2e-21 103.6 80 70.0
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 1.2e-20 103.2 82 72.0
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 1.6e-20 102.8 79 69.6
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 1.6e-20 102.8 83 69.9
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 1.6e-20 102.8 83 66.3
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 2.1e-20 102.4 76 75.0
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 2.1e-20 102.4 78 70.5
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 2.1e-20 102.4 89 60.7
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 2.7e-20 102.1 82 67.1
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 3.5e-20 101.7 98 60.2
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 6.0e-20 100.9 79 69.6
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 6.0e-20 100.9 78 70.5
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 7.8e-20 100.5 89 59.6
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 7.8e-20 100.5 98 57.1
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 7.8e-20 100.5 98 61.2
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 1.3e-19 99.8 85 64.7
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 1.3e-19 99.8 98 60.2
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 1.7e-19 99.4 83 66.3
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 1.7e-19 99.4 102 57.8
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 1.7e-19 99.4 83 65.1
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 2.3e-19 99.0 95 63.2
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 2.3e-19 99.0 95 63.2
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 2.3e-19 99.0 95 62.1
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 2.3e-19 99.0 95 63.2
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 3.0e-19 98.6 95 62.1
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 3.0e-19 98.6 95 62.1
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 3.0e-19 98.6 95 62.1
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 3.0e-19 98.6 92 59.8
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 3.9e-19 98.2 83 65.1
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 1.1e-18 96.7 89 60.7
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 1.5e-18 96.3 85 60.0
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.5e-18 96.3 86 67.4
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 2.5e-18 95.5 85 60.0
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 4.3e-18 94.7 82 63.4
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 4.3e-18 94.7 95 61.1
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 1.3e-17 93.2 80 63.8
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.6e-17 92.8 78 64.1
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 1.8e-16 89.4 81 54.3
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 3.1e-16 88.6 93 53.8
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 4.0e-16 88.2 81 55.6
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 6.9e-16 87.4 81 56.8
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 1.5e-15 86.3 78 64.1
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 2.0e-15 85.9 64 71.9
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 4.4e-15 84.7 78 61.5
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 7.6e-15 84.0 78 62.8
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 7.6e-15 84.0 78 61.5
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 8.4e-14 80.5 100 48.0
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 5.1e-11 71.2 76 56.6
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.5e-10 69.7 83 53.0
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 9.6e-10 67.0 53 69.8
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 1.3e-09 66.6 82 50.0
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.6e-09 65.1 57 66.7
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 2.4e-08 62.4 57 64.9


User provided reference genes

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