Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 0.0e+00 1686.4 1031 100.0
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 2.3e-228 796.6 1025 57.1
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 2.3e-204 716.8 983 52.6
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 1.9e-182 644.0 1147 47.1
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 5.0e-175 619.4 805 53.3
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 9.5e-174 615.1 950 49.2
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.4e-164 584.7 933 46.9
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 1.1e-156 558.5 960 47.3
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 6.0e-144 516.2 1069 41.9
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 1.4e-137 495.0 938 43.7
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.9e-134 484.6 872 43.8
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 7.3e-134 482.6 892 45.3
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 3.6e-133 480.3 945 43.2
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 3.6e-133 480.3 936 41.6
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 1.4e-132 478.4 934 42.9
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 1.8e-132 478.0 881 44.6
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 4.0e-132 476.9 957 42.5
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 1.3e-130 471.9 574 51.7
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 3.2e-129 467.2 946 44.7
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.7e-128 464.2 936 42.4
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 4.6e-128 463.4 936 42.4
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 1.1e-126 458.8 521 54.9
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 7.3e-126 456.1 1018 41.6
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 1.2e-123 448.7 954 42.9
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 2.0e-123 448.0 918 40.7
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 2.6e-123 447.6 920 42.9
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.1e-120 438.0 764 41.5
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.1e-118 432.2 968 41.2
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 7.4e-118 429.5 876 40.3
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 1.8e-116 424.9 916 39.3
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 4.5e-115 420.2 938 40.6
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.0e-114 419.1 910 42.5
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 3.8e-114 417.2 932 39.7
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 1.1e-113 415.6 706 43.5
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 3.3e-110 404.1 924 41.8
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 4.3e-110 403.7 926 40.5
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 1.3e-109 402.1 959 37.1
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.4e-108 398.7 939 37.5
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 3.1e-108 397.5 935 41.2
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 2.0e-107 394.8 874 41.2
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 2.7e-104 384.4 911 40.0
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 2.3e-103 381.3 936 40.5
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.1e-102 379.0 892 39.1
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 1.9e-102 378.3 962 37.8
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 4.3e-102 377.1 795 39.0
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 4.1e-100 370.5 785 39.5
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 6.9e-100 369.8 997 35.1
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 3.4e-99 367.5 941 38.4
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 7.7e-99 366.3 766 39.9
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 1.7e-98 365.2 1033 38.4
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 9.4e-97 359.4 923 38.6
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 1.0e-95 355.9 803 41.0
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 3.0e-95 354.4 972 36.4
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 3.9e-95 354.0 925 38.5
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 6.7e-95 353.2 907 40.8
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 7.4e-94 349.7 947 37.0
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.3e-93 349.0 940 37.1
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 3.7e-93 347.4 903 39.5
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 1.1e-92 345.9 906 35.3
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 2.9e-90 337.8 941 36.5
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.9e-89 335.1 946 36.5
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 1.9e-89 335.1 893 38.2
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 1.6e-88 332.0 890 38.3
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 3.9e-87 327.4 766 39.2
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 5.1e-87 327.0 959 36.2
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 3.1e-84 317.8 939 36.8
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 4.1e-84 317.4 936 35.1
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.6e-83 315.5 940 34.1
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 3.8e-82 310.8 944 36.0
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.9e-81 308.5 713 42.1
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 1.6e-80 305.4 904 37.5
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 8.0e-80 303.1 930 37.2
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 8.0e-80 303.1 721 43.6
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 4.4e-78 297.4 879 35.9
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 1.3e-77 295.8 915 35.1
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.3e-74 285.8 951 35.3
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 6.5e-74 283.5 775 35.0
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 2.6e-70 271.6 926 34.0
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 5.7e-70 270.4 493 42.2
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 2.2e-69 268.5 604 38.2
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 2.2e-69 268.5 756 38.9
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 2.2e-66 258.5 924 33.5
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 1.7e-61 242.3 959 32.4
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.5e-57 228.4 923 33.0
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 2.5e-57 228.4 947 31.0
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 3.4e-54 218.0 804 29.7
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 5.7e-54 217.2 921 32.7
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 1.1e-52 213.0 367 40.6
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.2e-48 199.5 706 31.6
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 8.0e-48 196.8 911 33.5
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 4.4e-46 191.0 883 31.0
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 3.7e-45 188.0 929 30.1
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 6.4e-45 187.2 257 44.7
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 3.9e-42 177.9 906 31.6
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.5e-38 166.0 964 28.6
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 9.8e-38 163.3 956 29.4
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 1.3e-37 162.9 455 35.4
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 3.6e-32 144.8 533 31.9
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 4.0e-31 141.4 590 32.4
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 1.2e-30 139.8 960 28.0
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.2e-30 139.8 193 48.7
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.7e-29 136.0 919 29.1
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 6.4e-29 134.0 719 31.4
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 4.6e-27 127.9 845 29.3
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 6.0e-27 127.5 976 28.3
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 4.3e-25 121.3 261 38.3
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 1.7e-21 109.4 424 31.6
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 5.4e-20 104.4 362 33.7
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 3.9e-18 98.2 83 74.7
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 1.3e-16 93.2 145 46.2
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 1.1e-15 90.1 910 25.8
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 7.6e-14 84.0 133 45.9
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 7.4e-09 67.4 102 47.1


User provided reference genes

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