Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 6.1e-288 993.4 495 100.0
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 1.6e-166 590.1 504 62.5
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 4.4e-161 572.0 483 60.2
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.4e-154 550.4 502 59.4
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 8.3e-152 541.2 499 57.3
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 3.5e-150 535.8 442 60.9
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.0e-149 534.3 505 54.7
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.7e-149 533.5 505 54.9
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 2.8e-147 526.2 500 56.6
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 3.4e-145 519.2 506 55.1
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 4.4e-145 518.8 497 54.9
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 5.8e-145 518.5 498 53.8
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 1.3e-144 517.3 506 53.6
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 2.2e-144 516.5 501 55.1
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 2.9e-144 516.2 504 53.8
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 5.6e-140 501.9 496 54.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 7.3e-140 501.5 505 54.5
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 9.6e-140 501.1 514 52.1
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 5.2e-138 495.4 500 54.2
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 1.5e-137 493.8 508 53.0
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 1.3e-136 490.7 508 51.4
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.7e-136 490.3 503 51.9
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 2.4e-135 486.5 500 50.8
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 3.2e-135 486.1 495 53.3
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 3.2e-135 486.1 506 51.4
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 3.5e-134 482.6 501 51.7
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 1.0e-133 481.1 516 51.0
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.0e-133 481.1 506 51.0
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 5.1e-133 478.8 503 53.1
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 1.9e-132 476.9 511 50.7
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-131 474.2 485 50.7
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.3e-131 474.2 510 50.6
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 2.1e-131 473.4 509 50.7
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 2.8e-131 473.0 513 50.7
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.8e-131 473.0 485 50.5
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 3.6e-131 472.6 509 50.9
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 8.1e-131 471.5 505 51.1
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 8.1e-131 471.5 509 50.5
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 1.9e-127 460.3 508 49.2
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.0e-125 454.5 500 50.0
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 1.5e-124 450.7 526 48.3
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 6.2e-123 445.3 509 49.3
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 3.1e-122 443.0 425 52.5
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 9.0e-122 441.4 504 48.6
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 7.6e-121 438.3 435 54.0
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 6.4e-120 435.3 507 46.9
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 3.5e-118 429.5 507 46.9
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 1.3e-117 427.6 507 47.1
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 1.3e-117 427.6 519 48.4
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 3.0e-117 426.4 503 46.7
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 3.9e-117 426.0 524 46.8
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 1.5e-116 424.1 508 45.7
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 1.9e-116 423.7 507 46.5
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 1.6e-115 420.6 508 45.3
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 8.2e-115 418.3 508 45.1
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 1.8e-114 417.2 508 44.5
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 3.1e-114 416.4 506 45.1
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 4.5e-113 412.5 504 45.8
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 2.2e-112 410.2 502 46.2
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.4e-111 407.5 511 43.4
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 5.5e-111 405.6 432 50.5
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.4e-106 390.2 411 50.9
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-105 387.9 411 50.6
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 4.5e-105 386.0 413 49.6
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 1.9e-103 380.6 503 43.7
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 9.1e-98 361.7 420 47.1
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 9.1e-98 361.7 417 47.7
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 2.6e-97 360.1 410 48.5
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.0e-93 348.2 417 46.5
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 3.0e-93 346.7 508 41.5
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 9.7e-84 315.1 306 52.3
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 4.4e-76 289.7 365 46.8
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 5.9e-73 279.3 552 35.7
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 7.7e-73 278.9 245 58.0
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 3.8e-72 276.6 465 36.8
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 1.5e-68 264.6 560 30.7
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 5.4e-66 256.1 510 34.7
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 3.4e-60 236.9 505 32.7
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 5.2e-37 159.8 159 50.9
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 8.3e-35 152.5 470 25.3
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 2.8e-22 110.9 446 23.8
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 3.1e-21 107.5 118 50.0
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 2.5e-15 87.8 507 24.1
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 4.0e-13 80.5 246 29.7
SMO353G0419 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 3.0e-08 64.3 68 41.2
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 4.3e-07 60.5 90 36.7


User provided reference genes

Program Settings