Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 3.4e-52 208.0 101 100.0
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 9.4e-26 120.2 101 61.4
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 2.3e-24 115.5 98 60.2
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 1.3e-22 109.8 103 62.1
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 1.0e-19 100.1 97 55.7
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 2.2e-19 99.0 97 54.6
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 6.5e-19 97.4 97 56.7
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 1.4e-18 96.3 101 54.5
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 1.0e-16 90.1 72 58.3
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 1.0e-16 90.1 98 51.0
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 2.3e-16 89.0 93 50.5
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 3.0e-16 88.6 95 51.6
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 3.0e-16 88.6 53 77.4
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 1.1e-15 86.7 73 61.6
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 1.1e-15 86.7 73 61.6
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 1.1e-15 86.7 73 61.6
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 2.0e-15 85.9 74 59.5
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 7.4e-15 84.0 93 49.5
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 7.4e-15 84.0 101 48.5
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 9.7e-15 83.6 117 41.9
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 9.7e-15 83.6 94 51.1
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 1.3e-14 83.2 97 48.5
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 2.2e-14 82.4 97 46.4
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 4.8e-14 81.3 52 67.3
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 4.8e-14 81.3 53 71.7
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 8.2e-14 80.5 95 47.4
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 1.8e-13 79.3 92 51.1
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 2.4e-13 79.0 60 63.3
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 3.1e-13 78.6 95 48.4
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 5.3e-13 77.8 95 48.4
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 7.0e-13 77.4 100 49.0
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 7.0e-13 77.4 95 47.4
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 7.0e-13 77.4 60 61.7
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 9.1e-13 77.0 53 67.9
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 2.6e-12 75.5 59 62.7
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 2.6e-12 75.5 100 48.0
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 3.5e-12 75.1 95 48.4
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 3.5e-12 75.1 95 48.4
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 4.5e-12 74.7 75 52.0
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 7.7e-12 73.9 96 45.8
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 7.7e-12 73.9 97 44.3
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.0e-11 73.6 47 72.3
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.0e-11 73.6 47 72.3
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.9e-11 72.0 46 71.7
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.9e-11 72.0 46 71.7
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 5.0e-11 71.2 96 44.8
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 5.0e-11 71.2 53 58.5
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 8.5e-11 70.5 42 78.6
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 3.2e-10 68.6 86 47.7
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 5.5e-10 67.8 92 42.4
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 7.2e-10 67.4 91 45.1
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 7.2e-10 67.4 49 65.3
unitig_52.g17095 Utricularia gibba HOM05D008202 ORTHO05D010302 9.4e-10 67.0 52 51.9
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 1.6e-09 66.2 97 40.2
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 2.1e-09 65.9 42 69.0
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 2.7e-09 65.5 43 62.8
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 3.6e-09 65.1 64 51.6
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 4.7e-09 64.7 100 42.0
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 6.1e-09 64.3 54 59.3
CsaV3_2G001850 Cucumis sativus L. HOM05D008202 ORTHO05D010302 1.0e-08 63.5 47 55.3
unitig_52.g17250 Utricularia gibba HOM05D008202 ORTHO05D010302 4.0e-08 61.6 69 40.6
Zm00001eb371180 Zea mays HOM05D008202 ORTHO05D010302 4.0e-08 61.6 46 63.0
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 8.8e-08 60.5 96 41.7
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 1.1e-07 60.1 104 39.4
Os01g0742766 Oryza sativa ssp. japonica HOM05D008202 ORTHO05D010302 2.0e-07 59.3 46 60.9
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 3.3e-07 58.5 93 39.8
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 3.3e-07 58.5 85 40.0
MD15G1197100 Malus domestica HOM05D008202 ORTHO05D010302 2.2e-06 55.8 85 41.2
Mapoly0004s0023 Marchantia polymorpha HOM05D039400 ORTHO05D034304 2.2e-06 55.8 62 50.0
PSO210G1322 Papaver somniferum HOM05D061259 ORTHO05D010302 6.3e-06 54.3 35 65.7
PSO210G2383 Papaver somniferum HOM05D061259 ORTHO05D010302 6.3e-06 54.3 35 65.7


User provided reference genes

Program Settings