Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 2.5e-193 678.7 365 100.0
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.2e-94 350.9 360 62.5
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 8.2e-72 275.0 399 50.9
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 1.6e-67 260.8 395 48.4
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 8.8e-66 255.0 371 47.2
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 2.6e-65 253.4 365 51.0
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 3.3e-65 253.1 365 51.8
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 9.7e-65 251.5 357 51.5
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 1.7e-64 250.8 360 49.2
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 2.4e-63 246.9 355 50.4
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 2.0e-62 243.8 370 47.3
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 2.0e-62 243.8 369 50.1
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 3.5e-62 243.0 353 47.6
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 8.5e-61 238.4 379 45.1
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.1e-60 238.0 379 47.0
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 1.9e-60 237.3 381 46.2
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.9e-60 237.3 385 43.9
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 5.5e-60 235.7 367 47.1
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 9.4e-60 235.0 351 49.3
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 2.1e-59 233.8 360 45.0
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 1.0e-58 231.5 287 52.3
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 1.8e-58 230.7 302 47.4
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 4.0e-58 229.6 384 46.6
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 6.8e-58 228.8 367 45.2
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 6.8e-58 228.8 404 44.6
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 8.8e-58 228.4 358 46.1
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.2e-57 228.0 341 47.5
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 1.7e-56 224.2 369 47.2
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 2.2e-56 223.8 368 48.6
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 3.7e-56 223.0 372 44.1
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 6.3e-56 222.2 367 43.9
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 3.1e-55 219.9 375 44.0
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 5.4e-55 219.2 429 42.9
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 2.7e-54 216.9 356 44.4
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 2.7e-54 216.9 356 44.4
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 3.5e-54 216.5 381 44.1
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 8.5e-53 211.8 359 44.3
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 8.5e-53 211.8 351 44.7
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.5e-52 211.1 358 48.6
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 7.2e-52 208.8 342 43.6
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 2.1e-51 207.2 350 44.3
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 4.7e-51 206.1 320 44.4
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 6.8e-50 202.2 363 41.9
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 1.5e-49 201.1 329 47.4
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 4.4e-49 199.5 377 41.1
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 5.7e-49 199.1 341 42.8
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 5.7e-49 199.1 382 45.0
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 2.2e-48 197.2 363 43.8
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 3.7e-48 196.4 295 49.5
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 4.9e-48 196.1 351 43.0
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 4.9e-48 196.1 368 44.6
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.4e-47 194.5 360 44.4
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 1.8e-47 194.1 298 45.0
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 1.8e-47 194.1 366 45.6
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 2.4e-47 193.7 353 44.5
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.2e-46 191.4 353 44.2
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 2.7e-46 190.3 301 48.2
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 5.9e-46 189.1 351 42.2
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 7.7e-46 188.7 512 34.8
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 7.7e-46 188.7 320 44.7
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 7.7e-46 188.7 356 43.5
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 1.3e-45 188.0 358 39.9
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 3.8e-45 186.4 349 42.7
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 3.3e-44 183.3 346 41.6
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 5.6e-44 182.6 296 42.2
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 9.5e-44 181.8 367 39.5
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 3.6e-43 179.9 341 38.7
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 4.7e-43 179.5 296 46.3
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 4.7e-43 179.5 300 46.0
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 8.0e-43 178.7 295 43.7
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 2.3e-42 177.2 396 38.1
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 5.2e-42 176.0 448 35.9
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 5.2e-42 176.0 323 44.6
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 8.9e-42 175.3 191 56.5
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 2.0e-41 174.1 356 39.3
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 4.4e-41 172.9 342 40.4
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 9.8e-41 171.8 247 47.8
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 4.9e-40 169.5 296 45.6
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 4.9e-40 169.5 289 42.6
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 6.4e-40 169.1 178 55.6
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 1.8e-39 167.5 488 32.6
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 2.4e-39 167.2 289 44.3
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 1.1e-36 158.3 331 38.7
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.1e-36 158.3 294 41.5
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.5e-36 157.9 364 40.1
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 2.5e-36 157.1 248 46.4
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 2.1e-35 154.1 193 51.8
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 3.6e-35 153.3 245 44.5
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.0e-34 151.8 355 39.2
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 1.8e-34 151.0 332 40.4
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 1.2e-33 148.3 190 51.6
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.5e-33 147.9 340 39.4
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 4.9e-32 142.9 212 46.7
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 6.4e-32 142.5 250 43.2
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 1.4e-31 141.4 297 40.4
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 3.2e-31 140.2 433 32.6
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.2e-30 138.3 459 32.5
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 2.7e-30 137.1 290 40.7
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.3e-29 134.8 347 36.0
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.5e-28 131.3 276 36.6
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 4.3e-28 129.8 258 40.7
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 5.6e-28 129.4 257 40.9
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.2e-27 128.3 188 45.2
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.2e-27 128.3 242 43.0
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 2.1e-27 127.5 463 29.6
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 3.6e-27 126.7 262 39.7
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 1.8e-26 124.4 335 36.7
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 1.8e-26 124.4 335 36.7
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 1.5e-25 121.3 215 45.6
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 3.4e-25 120.2 257 39.3
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 9.8e-25 118.6 125 56.8
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 9.2e-23 112.1 322 35.4
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.2e-22 111.7 273 37.4
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.2e-22 111.7 347 33.7
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 1.6e-22 111.3 276 34.1
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 4.6e-22 109.8 251 36.7
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 6.6e-21 105.9 385 31.9
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.9e-20 104.4 205 41.0
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 2.5e-20 104.0 269 37.9
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 9.5e-20 102.1 275 34.2
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 6.2e-19 99.4 173 41.0
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 6.8e-18 95.9 274 34.7
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 1.5e-17 94.7 314 33.8
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 4.4e-17 93.2 191 36.6
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 3.2e-15 87.0 175 38.3
Lsat_1_v5_gn_5_102961 Lactuca sativa HOM05D005514 ORTHO05D006563 7.8e-14 82.4 75 56.0
Oeu064594.1 Olea europaea HOM05D005514 ORTHO05D006563 7.8e-14 82.4 69 66.7
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.3e-13 81.6 224 32.6
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.7e-13 81.3 84 53.6
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 4.3e-12 76.6 49 67.3
Cc06_g09940 Coffea canephora HOM05D005514 ORTHO05D006563 1.1e-10 72.0 68 66.2
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.1e-10 72.0 37 78.4
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 3.4e-09 67.0 50 62.0
COL.COLO4_34822 Corchorus olitorius HOM05D005514 ORTHO05D006563 9.9e-09 65.5 72 63.9
MD15G1181500 Malus domestica HOM05D005514 ORTHO05D006563 1.3e-08 65.1 61 57.4


User provided reference genes

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