Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 3.6e-73 278.1 134 100.0
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 5.4e-45 184.5 119 70.6
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 2.3e-40 169.1 115 68.7
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 9.8e-39 163.7 134 58.2
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 2.1e-33 146.0 136 55.1
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.8e-33 145.6 135 53.3
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 3.6e-33 145.2 136 55.1
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 8.0e-33 144.1 137 54.0
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.8e-32 142.9 136 53.7
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.8e-32 142.9 140 52.1
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 1.8e-32 142.9 80 81.2
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 4.0e-32 141.7 134 53.0
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.8e-32 141.0 135 53.3
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 6.8e-32 141.0 157 49.0
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 8.9e-32 140.6 137 51.1
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 8.9e-32 140.6 135 53.3
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.4e-31 138.7 123 54.5
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 3.4e-31 138.7 123 54.5
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.4e-31 138.3 91 69.2
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 4.4e-31 138.3 135 54.1
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 2.2e-30 136.0 137 56.9
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 6.4e-30 134.4 137 53.3
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 1.1e-29 133.7 136 53.7
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 2.4e-29 132.5 138 51.4
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.4e-29 132.5 135 50.4
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 2.4e-29 132.5 136 52.2
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 7.0e-29 131.0 134 52.2
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 9.2e-29 130.6 123 54.5
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 2.0e-28 129.4 91 72.5
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.0e-28 129.4 123 50.4
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 2.7e-28 129.0 147 46.3
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 3.5e-28 128.6 136 51.5
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 4.6e-28 128.3 123 49.6
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 1.0e-27 127.1 137 48.9
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 1.0e-27 127.1 137 54.7
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 1.0e-27 127.1 122 53.3
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.0e-27 127.1 137 54.0
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.3e-27 126.7 82 65.9
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 1.3e-27 126.7 136 47.8
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.3e-27 126.7 115 53.9
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 2.3e-27 125.9 137 51.8
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 3.9e-27 125.2 81 67.9
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.6e-27 124.4 91 63.7
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 8.6e-27 124.0 80 72.5
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.5e-26 123.2 82 68.3
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 1.9e-26 122.9 138 45.7
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 1.9e-26 122.9 78 73.1
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 2.5e-26 122.5 97 62.9
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.3e-26 122.1 120 55.0
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 4.3e-26 121.7 80 70.0
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 5.6e-26 121.3 81 66.7
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 9.5e-26 120.6 122 52.5
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 1.2e-25 120.2 92 58.7
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 1.2e-25 120.2 76 68.4
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 2.1e-25 119.4 75 73.3
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 2.1e-25 119.4 136 51.5
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 3.6e-25 118.6 95 56.8
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 4.7e-25 118.2 95 62.1
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 6.2e-25 117.9 81 66.7
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 6.2e-25 117.9 137 51.1
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 1.4e-24 116.7 68 75.0
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 1.4e-24 116.7 144 49.3
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.8e-24 116.3 79 68.4
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 3.1e-24 115.5 136 50.7
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 4.0e-24 115.2 82 62.2
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 5.2e-24 114.8 135 47.4
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 8.9e-24 114.0 137 47.4
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 1.2e-23 113.6 140 47.9
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 1.5e-23 113.2 82 59.8
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.6e-23 112.5 81 67.9
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 4.4e-23 111.7 135 48.1
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 7.5e-23 110.9 79 65.8
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 7.5e-23 110.9 100 57.0
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 9.8e-23 110.5 148 43.2
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.3e-22 110.2 81 65.4
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 1.3e-22 110.2 69 63.8
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 1.7e-22 109.8 97 57.7
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 2.2e-22 109.4 136 47.8
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 3.7e-22 108.6 138 50.7
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 4.9e-22 108.2 107 49.5
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 4.9e-22 108.2 80 65.0
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 4.9e-22 108.2 137 49.6
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 1.1e-21 107.1 115 46.1
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.9e-21 106.3 138 42.0
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.9e-21 106.3 138 42.0
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 3.2e-21 105.5 137 45.3
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 3.2e-21 105.5 134 45.5
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 4.1e-21 105.1 102 52.9
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 7.1e-21 104.4 137 42.3
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 7.1e-21 104.4 98 57.1
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 9.2e-21 104.0 93 52.7
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 2.1e-20 102.8 136 46.3
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 2.1e-20 102.8 123 50.4
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 2.7e-20 102.4 136 46.3
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 2.7e-20 102.4 81 65.4
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 2.7e-20 102.4 135 43.0
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 2.7e-20 102.4 135 43.0
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 3.5e-20 102.1 83 65.1
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 6.0e-20 101.3 77 57.1
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 6.0e-20 101.3 77 57.1
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 6.0e-20 101.3 135 41.5
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 7.8e-20 100.9 74 60.8
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.0e-19 100.5 93 52.7
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 1.0e-19 100.5 91 53.8
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 2.3e-19 99.4 122 48.4
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 2.3e-19 99.4 82 56.1
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 5.1e-19 98.2 122 42.6
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 1.1e-18 97.1 92 54.3
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 1.1e-18 97.1 135 42.2
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 1.1e-18 97.1 137 43.8
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 1.9e-18 96.3 135 42.2
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 2.5e-18 95.9 91 51.6
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 2.5e-18 95.9 91 51.6
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 2.5e-18 95.9 141 44.7
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 3.3e-18 95.5 100 47.0
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 3.3e-18 95.5 108 49.1
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 3.3e-18 95.5 127 40.9
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 4.3e-18 95.1 135 45.9
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 4.3e-18 95.1 137 46.0
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 4.3e-18 95.1 82 53.7
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 5.6e-18 94.7 76 57.9
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 7.3e-18 94.4 129 45.7
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 7.3e-18 94.4 94 50.0
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 9.5e-18 94.0 134 44.0
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 9.5e-18 94.0 124 48.4
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 1.6e-17 93.2 75 56.0
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.6e-17 93.2 114 44.7
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.8e-17 92.4 137 41.6
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 3.6e-17 92.0 138 43.5
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 3.6e-17 92.0 93 53.8
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 4.7e-17 91.7 91 53.8
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 6.2e-17 91.3 80 57.5
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 8.1e-17 90.9 74 55.4
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 1.4e-16 90.1 59 62.7
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 1.8e-16 89.7 96 52.1
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.3e-16 89.4 121 46.3
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.3e-16 89.4 101 46.5
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 3.1e-16 89.0 127 43.3
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 3.1e-16 89.0 91 52.7
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 3.1e-16 89.0 80 57.5
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 4.0e-16 88.6 92 45.7
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 4.0e-16 88.6 92 45.7
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 4.0e-16 88.6 121 45.5
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.0e-16 88.6 121 45.5
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 5.2e-16 88.2 91 50.5
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 6.8e-16 87.8 91 52.7
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 6.8e-16 87.8 91 52.7
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 6.8e-16 87.8 91 50.5
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 6.8e-16 87.8 74 56.8
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 8.9e-16 87.4 82 54.9
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 1.2e-15 87.0 137 38.0
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 1.2e-15 87.0 81 53.1
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 1.5e-15 86.7 92 45.7
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 1.5e-15 86.7 137 43.8
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 2.0e-15 86.3 137 38.7
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 2.6e-15 85.9 81 54.3
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 3.4e-15 85.5 74 55.4
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 4.4e-15 85.1 137 39.4
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 5.8e-15 84.7 134 42.5
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 9.9e-15 84.0 132 41.7
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.2e-14 82.8 132 40.9
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.2e-14 82.8 132 40.9
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 2.2e-14 82.8 126 39.7
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 2.9e-14 82.4 132 40.9
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 4.9e-14 81.6 92 47.8
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 8.4e-14 80.9 89 51.7
C03p67010 Brassica napus HOM05D003537 ORTHO05D004180 1.1e-13 80.5 97 46.4
BolC3t18976H Brassica oleracea HOM05D003537 ORTHO05D004180 1.1e-13 80.5 97 46.4
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 3.2e-13 79.0 123 39.0
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 3.2e-13 79.0 121 42.1
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.6e-12 76.6 55 69.1
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 4.6e-12 75.1 83 54.2
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 1.0e-11 73.9 133 36.8
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 1.7e-11 73.2 54 64.8
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 3.0e-11 72.4 126 35.7
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 8.6e-11 70.9 77 45.5
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 1.5e-10 70.1 78 50.0
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 2.5e-10 69.3 62 53.2
Sabra18G0060200 Salix brachista HOM05D003537 ORTHO05D004180 7.3e-10 67.8 124 36.3
Gohir.D08G087900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.1e-09 66.2 59 52.5
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.8e-09 65.9 107 41.1
MCO09G833 Micromonas commoda HOM05D001438 ORTHO05D001336 3.6e-09 65.5 73 41.1
Gohir.D06G099500 Gossypium hirsutum HOM05D003537 ORTHO05D004180 5.2e-08 61.6 58 55.2
MELO3C030460.2 Cucumis melo HOM05D003537 ORTHO05D004180 9.9e-07 57.4 48 64.6
Gohir.A10G061300 Gossypium hirsutum HOM05D003537 ORTHO05D004180 9.9e-07 57.4 52 48.1
Gohir.A10G065840 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.3e-06 57.0 47 55.3


User provided reference genes

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