Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00449 Erythranthe guttata HOM05D002758 ORTHO05D002885 8.0e-47 190.7 144 100.0
Oeu058050.1 Olea europaea HOM05D002758 ORTHO05D002885 3.6e-23 112.1 142 59.9
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 1.8e-22 109.8 142 54.2
SalBow1G1971 Salvia bowleyana HOM05D002758 ORTHO05D002885 5.2e-22 108.2 146 51.4
MSTRG.10674 Avicennia marina HOM05D002758 ORTHO05D002885 3.8e-20 102.1 156 55.8
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 6.4e-20 101.3 142 52.8
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 7.1e-19 97.8 144 49.3
Sabra06G0051500 Salix brachista HOM05D002758 ORTHO05D002885 7.1e-19 97.8 150 46.0
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 2.3e-17 92.8 148 45.3
Potri.018G131100 Populus trichocarpa HOM05D002758 ORTHO05D002885 3.0e-17 92.4 147 46.3
Dinv36518 Davidia involucrata HOM05D002758 ORTHO05D002885 3.9e-17 92.0 142 51.4
Gohir.A05G016000 Gossypium hirsutum HOM05D002758 ORTHO05D002885 8.7e-17 90.9 147 50.3
Gohir.D05G017100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 8.7e-17 90.9 147 50.3
Gorai.009G017300 Gossypium raimondii HOM05D002758 ORTHO05D002885 8.7e-17 90.9 147 50.3
Potri.006G069100 Populus trichocarpa HOM05D002758 ORTHO05D002885 8.7e-17 90.9 148 45.9
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 1.1e-16 90.5 149 45.0
CANSAT11G2365 Cannabis sativa HOM05D002758 ORTHO05D002885 1.9e-16 89.7 155 46.5
Duzib168G0478 Durio zibethinus HOM05D002758 ORTHO05D002885 1.9e-16 89.7 148 54.1
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 1.9e-16 89.7 143 47.6
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 4.3e-16 88.6 151 41.1
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 9.6e-16 87.4 145 46.9
Cc06_g08410 Coffea canephora HOM05D002758 ORTHO05D002885 1.6e-15 86.7 154 44.2
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 2.1e-15 86.3 142 46.5
CAN.G403.8 Capsicum annuum HOM05D002758 ORTHO05D002885 3.6e-15 85.5 157 44.6
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 4.8e-15 85.1 150 44.7
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 8.1e-15 84.3 142 45.1
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 8.1e-15 84.3 133 45.9
PGR142G4319 Punica granatum HOM05D002758 ORTHO05D002885 1.4e-14 83.6 179 46.4
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 1.4e-14 83.6 150 47.3
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 1.8e-14 83.2 144 43.8
Manes.14G132900 Manihot esculenta HOM05D002758 ORTHO05D002885 1.8e-14 83.2 152 47.4
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 3.1e-14 82.4 144 41.0
Lsat_1_v5_gn_5_95300 Lactuca sativa HOM05D002758 ORTHO05D002885 4.0e-14 82.0 145 42.1
Peaxi162Scf00046g00524 Petunia axillaris HOM05D002758 ORTHO05D002885 6.9e-14 81.3 147 44.9
GSVIVG01015544001 Vitis vinifera HOM05D002758 ORTHO05D002885 6.9e-14 81.3 142 52.8
ClCG06G011200 Citrullus lanatus HOM05D002758 ORTHO05D002885 9.0e-14 80.9 150 38.7
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 9.0e-14 80.9 146 45.9
Eucgr.C01181 Eucalyptus grandis HOM05D002758 ORTHO05D002885 9.0e-14 80.9 147 44.9
CSS0022572 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 1.2e-13 80.5 152 43.4
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 1.2e-13 80.5 143 42.0
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 1.2e-13 80.5 142 42.3
HanXRQChr05g0138371 Helianthus annuus HOM05D002758 ORTHO05D002885 1.5e-13 80.1 150 44.7
HanXRQChr05g0140201 Helianthus annuus HOM05D002758 ORTHO05D002885 1.5e-13 80.1 150 44.7
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 1.5e-13 80.1 158 42.4
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea HOM05D002758 ORTHO05D002885 2.6e-13 79.3 145 40.7
FAN26G2290 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.4e-13 79.0 149 41.6
HanXRQChr10g0315561 Helianthus annuus HOM05D002758 ORTHO05D002885 3.4e-13 79.0 148 43.2
CsaV3_1G030210 Cucumis sativus L. HOM05D002758 ORTHO05D002885 4.5e-13 78.6 144 43.1
DCAR_020919 Daucus carota HOM05D002758 ORTHO05D002885 4.5e-13 78.6 145 47.6
Sed0027515 Sechium edule HOM05D002758 ORTHO05D002885 4.5e-13 78.6 142 39.4
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea HOM05D002758 ORTHO05D002885 5.8e-13 78.2 146 40.4
Lsat_1_v5_gn_7_45161 Lactuca sativa HOM05D002758 ORTHO05D002885 5.8e-13 78.2 142 40.1
RcHm_v2.0_Chr2g0088291 Rosa chinensis HOM05D002758 ORTHO05D002885 5.8e-13 78.2 149 41.6
Solyc07g008280.4 Solanum lycopersicum HOM05D002758 ORTHO05D002885 5.8e-13 78.2 153 41.2
FAN23G2585 Fragaria x ananassa HOM05D002758 ORTHO05D002885 7.6e-13 77.8 149 40.9
QL02p088621 Quercus lobata HOM05D002758 ORTHO05D002885 7.6e-13 77.8 149 47.7
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 9.9e-13 77.4 140 41.4
Sopen07g004170 Solanum pennellii HOM05D002758 ORTHO05D002885 1.3e-12 77.0 153 41.2
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 1.7e-12 76.6 139 43.9
FvH4_1g03160 Fragaria vesca HOM05D002758 ORTHO05D002885 1.7e-12 76.6 148 41.2
Psat4g039800 Pisum sativum HOM05D002758 ORTHO05D002885 1.7e-12 76.6 143 47.6
PGSC0003DMG400019894 Solanum tuberosum HOM05D002758 ORTHO05D002885 1.7e-12 76.6 158 44.3
MELO3C010338.2 Cucumis melo HOM05D002758 ORTHO05D002885 2.2e-12 76.3 144 42.4
FAN19G2709 Fragaria x ananassa HOM05D002758 ORTHO05D002885 2.2e-12 76.3 149 40.9
Lj4g0007884 Lotus japonicus HOM05D002758 ORTHO05D002885 2.9e-12 75.9 149 43.0
Sed0025517 Sechium edule HOM05D002758 ORTHO05D002885 2.9e-12 75.9 144 44.4
Ca_21675_v3 Cicer arietinum L. HOM05D002758 ORTHO05D002885 3.8e-12 75.5 160 39.4
HanXRQChr04g0096561 Helianthus annuus HOM05D002758 ORTHO05D002885 3.8e-12 75.5 142 38.7
Lsat_1_v5_gn_8_58521 Lactuca sativa HOM05D002758 ORTHO05D002885 4.9e-12 75.1 151 44.4
CiPaw.03G244800 Carya illinoinensis HOM05D002758 ORTHO05D002885 6.4e-12 74.7 150 45.3
Phvul.003G165200 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 8.4e-12 74.3 145 40.7
VMungo1215G1272 Vigna mungo HOM05D002758 ORTHO05D002885 8.4e-12 74.3 145 42.1
Cfa003385 Carpinus fangiana HOM05D002758 ORTHO05D002885 1.9e-11 73.2 147 40.8
DCAR_014886 Daucus carota HOM05D002758 ORTHO05D002885 1.9e-11 73.2 148 41.9
ECA240G3055 Erigeron canadensis HOM05D002758 ORTHO05D002885 3.2e-11 72.4 136 41.9
Glyma.17G114300 Glycine max HOM05D002758 ORTHO05D002885 3.2e-11 72.4 146 42.5
Gorai.001G042500 Gossypium raimondii HOM05D002758 ORTHO05D002885 4.2e-11 72.0 147 45.6
TWI32G0299 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 4.2e-11 72.0 142 44.4
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 5.4e-11 71.6 134 44.8
ECA234G1831 Erigeron canadensis HOM05D002758 ORTHO05D002885 5.4e-11 71.6 144 37.5
Glyma.13G166500 Glycine max HOM05D002758 ORTHO05D002885 7.1e-11 71.2 153 44.4
Nitab4.5_0006661g0030 Nicotiana tabacum HOM05D002758 ORTHO05D002885 7.1e-11 71.2 80 50.0
Cpa.g.sc46.5 Carica papaya HOM05D002758 ORTHO05D002885 9.3e-11 70.9 176 36.9
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 9.3e-11 70.9 147 40.8
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 9.3e-11 70.9 140 37.1
Gohir.A07G036200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.2e-10 70.5 147 43.5
HanXRQChr12g0356261 Helianthus annuus HOM05D002758 ORTHO05D002885 1.2e-10 70.5 148 37.8
TPR.G26478 Trifolium pratense HOM05D002758 ORTHO05D002885 1.2e-10 70.5 153 39.9
Haze_25567 Corylus avellana HOM05D002758 ORTHO05D002885 1.6e-10 70.1 157 40.8
Gohir.D07G040200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.7e-10 69.3 147 46.3
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 3.5e-10 68.9 139 36.0
FAN28G2446 Fragaria x ananassa HOM05D000315 ORTHO05D001379 4.6e-10 68.6 142 40.1
COL.COLO4_35114 Corchorus olitorius HOM05D002758 ORTHO05D002885 6.0e-10 68.2 149 39.6
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 6.0e-10 68.2 144 37.5
DCAR_017810 Daucus carota HOM05D002758 ORTHO05D002885 1.0e-09 67.4 137 40.1
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.3e-09 67.0 142 38.0
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.3e-09 67.0 141 39.7
Medtr4g114600 Medicago truncatula HOM05D002758 ORTHO05D002885 2.3e-09 66.2 153 39.2
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 8.7e-09 64.3 140 40.0
Hund09249 Selenicereus undatus HOM05D002758 ORTHO05D002885 8.7e-09 64.3 152 40.8
THA.LOC104808985 Tarenaya hassleriana HOM05D002758 ORTHO05D002885 1.1e-08 63.9 140 37.1
Nitab4.5_0005728g0010 Nicotiana tabacum HOM05D002758 ORTHO05D002885 1.5e-08 63.5 135 37.0
TWI63G1461 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 1.5e-08 63.5 140 43.6
Cpa.g.sc10.256 Carica papaya HOM05D002758 ORTHO05D002885 1.9e-08 63.2 142 46.5
Peaxi162Scf00332g00756 Petunia axillaris HOM05D002758 ORTHO05D002885 1.9e-08 63.2 143 37.1
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.9e-08 63.2 142 36.6
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 3.3e-08 62.4 133 38.3
Nitab4.5_0001764g0140 Nicotiana tabacum HOM05D002758 ORTHO05D002885 1.6e-07 60.1 133 36.1
Lalb_Chr07g0178991 Lupinus albus HOM05D002758 ORTHO05D002885 2.1e-07 59.7 133 39.1
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 2.8e-07 59.3 133 37.6
Atru.chr1.2990 Acer truncatum HOM05D002758 ORTHO05D002885 4.8e-07 58.5 138 35.5
CiPaw.04G171600 Carya illinoinensis HOM05D002758 ORTHO05D002885 4.8e-07 58.5 79 44.3
Sc18g0000570 Simmondsia chinensis HOM05D002758 ORTHO05D002885 4.8e-07 58.5 143 39.2
Sabra18G0111200 Salix brachista HOM05D002758 ORTHO05D005776 6.2e-07 58.2 144 36.1
TWI18G1221 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 6.2e-07 58.2 142 35.9
MSTRG.11135 Avicennia marina HOM05D002758 ORTHO05D002885 8.1e-07 57.8 147 34.7
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 8.1e-07 57.8 63 44.4
HanXRQChr09g0241961 Helianthus annuus HOM05D002758 ORTHO05D002885 1.1e-06 57.4 140 38.6
Aa31LG8G2960 Aethionema arabicum HOM05D002758 ORTHO05D002885 1.4e-06 57.0 72 48.6
Ciclev10026775m.g Citrus clementina HOM05D002758 ORTHO05D002885 1.8e-06 56.6 139 36.0
Gohir.A10G074300 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.8e-06 56.6 143 35.7
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.4e-06 56.2 65 49.2
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.4e-06 56.2 65 49.2
Manes.04G113800 Manihot esculenta HOM05D002758 ORTHO05D002885 4.0e-06 55.5 152 38.2
Aa31LG10G2440 Aethionema arabicum HOM05D002758 ORTHO05D002885 5.3e-06 55.1 72 44.4
AT3G15760 Arabidopsis thaliana HOM05D002758 ORTHO05D002885 5.3e-06 55.1 72 47.2
BcaC08g43429 Brassica carinata HOM05D002758 ORTHO05D002885 5.3e-06 55.1 76 48.7
BraA05t20788Z Brassica rapa HOM05D002758 ORTHO05D002885 5.3e-06 55.1 149 43.6
Atru.chr7.1142 Acer truncatum HOM05D002758 ORTHO05D002885 6.9e-06 54.7 102 53.9
Sopen03g035550 Solanum pennellii HOM05D002758 ORTHO05D002885 6.9e-06 54.7 143 33.6
C06p07990 Brassica napus HOM05D002758 ORTHO05D002885 9.0e-06 54.3 76 48.7
BolC6t35882H Brassica oleracea HOM05D002758 ORTHO05D002885 9.0e-06 54.3 76 48.7
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 9.0e-06 54.3 144 36.1


User provided reference genes

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