Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 0.0e+00 2120.5 1068 100.0
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 0.0e+00 1265.8 1149 59.4
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 0.0e+00 1249.6 1084 61.5
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 6.0e-272 941.4 1129 48.9
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 4.7e-269 931.8 1183 46.1
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.5e-267 926.8 1107 47.7
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 1.7e-266 923.3 1114 45.9
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 3.5e-264 915.6 1095 46.4
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 3.5e-264 915.6 1091 47.4
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 3.3e-262 909.1 1128 46.2
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.2e-259 900.6 1109 45.5
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 3.4e-259 899.0 1091 46.6
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 7.6e-259 897.9 1113 47.5
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 2.1e-256 889.8 1119 46.8
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 8.7e-255 884.4 1091 46.2
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 7.3e-254 881.3 1137 44.3
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 9.0e-252 874.4 1214 43.2
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.2e-251 874.0 1113 44.8
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 5.6e-246 855.1 1109 45.4
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 3.6e-245 852.4 1125 43.6
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 7.6e-243 844.7 1121 43.8
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 1.3e-242 844.0 1121 44.3
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.9e-242 842.8 1121 44.3
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.5e-241 838.6 1121 44.2
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 7.9e-240 834.7 1114 44.7
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.8e-239 833.6 1124 43.6
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 1.1e-238 830.9 1226 42.3
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 2.5e-238 829.7 1129 43.3
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 4.8e-237 825.5 1113 42.3
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 3.4e-235 819.3 1084 44.6
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 1.4e-233 813.9 1118 40.9
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 2.5e-233 813.1 1106 42.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 5.5e-233 812.0 1107 41.1
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 2.3e-231 806.6 1121 41.7
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 5.1e-231 805.4 1135 42.0
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.9e-230 803.5 1104 42.8
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 2.5e-230 803.1 1109 41.7
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 4.3e-230 802.4 1117 40.9
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 4.8e-229 798.9 1079 43.9
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 3.4e-227 792.7 1125 41.9
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 3.8e-226 789.3 1074 43.9
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 6.5e-226 788.5 1009 44.8
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 3.2e-225 786.2 1111 42.2
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 1.8e-223 780.4 1114 41.2
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 5.1e-223 778.9 1087 43.2
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 8.7e-223 778.1 969 44.8
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.8e-220 770.4 1122 40.3
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 6.9e-220 768.5 1148 40.0
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 2.7e-216 756.5 1140 39.7
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 8.2e-213 745.0 1115 39.6
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 1.9e-209 733.8 956 44.5
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.7e-205 720.7 1128 40.0
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.8e-199 700.7 861 46.5
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 4.0e-199 699.5 1132 38.6
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 6.5e-194 682.2 1005 41.6
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 8.5e-194 681.8 1126 37.7
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 4.8e-189 666.0 1083 38.9
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 4.1e-180 636.3 953 39.9
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 7.8e-179 632.1 817 45.2
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.6e-171 607.8 824 43.9
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 2.5e-161 573.9 1023 36.4
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 2.3e-159 567.4 687 44.5
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 2.6e-158 563.9 893 39.2
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 8.6e-154 548.9 1077 35.3
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 8.4e-149 532.3 855 38.6
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 7.1e-148 529.3 683 43.3
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 3.0e-146 523.9 898 36.6
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 6.6e-146 522.7 1078 35.4
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 8.6e-146 522.3 852 39.9
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 7.1e-140 502.7 1092 32.9
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.4e-135 487.6 1201 31.0
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 8.4e-133 479.2 1083 33.1
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.8e-114 418.3 844 35.0
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 6.3e-112 409.8 1069 28.3
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 1.4e-95 355.5 407 47.9
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 8.5e-93 346.3 301 57.5
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 9.4e-92 342.8 420 48.3
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 7.5e-81 306.6 309 53.1
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 4.1e-71 274.2 203 66.0
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.6e-70 272.3 942 27.0
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 1.0e-69 269.6 1075 26.5
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.4e-58 232.6 259 50.6
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 9.8e-57 226.5 422 32.9
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.3e-56 223.4 260 48.5
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 1.3e-53 216.1 306 41.8
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 6.2e-51 207.2 247 49.4
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.0e-49 202.2 205 56.1
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 4.9e-48 197.6 157 65.0
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 4.3e-44 184.5 212 51.9
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.1e-43 182.2 398 32.4
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 7.5e-41 173.7 155 58.7
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 7.5e-41 173.7 155 58.7
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 7.1e-39 167.2 386 33.4
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 6.2e-35 154.1 213 45.5
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 9.9e-33 146.7 276 33.3
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 8.4e-32 143.7 162 45.7
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.4e-31 142.1 794 22.2
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 3.8e-24 118.2 87 63.2
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 3.5e-22 111.7 157 42.7
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 8.7e-21 107.1 87 66.7
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.2e-14 86.7 92 48.9


User provided reference genes

Program Settings