Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 1.8e-57 225.7 117 100.0
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 3.2e-46 188.3 115 84.3
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.7e-39 166.0 109 78.9
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 2.9e-39 165.2 111 76.6
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 3.6e-37 158.3 114 73.7
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 3.0e-36 155.2 99 76.8
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 3.0e-36 155.2 99 76.8
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 3.0e-36 155.2 99 76.8
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 4.0e-36 154.8 99 76.8
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 4.0e-36 154.8 99 77.8
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 8.9e-36 153.7 99 73.7
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 8.9e-36 153.7 99 75.8
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.5e-35 152.9 99 75.8
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.0e-35 152.5 99 75.8
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.0e-35 152.5 107 68.2
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 5.7e-35 151.0 97 77.3
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 5.7e-35 151.0 99 76.8
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 5.7e-35 151.0 98 75.5
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 5.7e-35 151.0 99 75.8
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 5.7e-35 151.0 89 85.4
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 9.8e-35 150.2 99 75.8
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.3e-34 149.8 98 75.5
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.3e-34 149.8 99 75.8
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.3e-34 149.8 99 74.7
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 2.2e-34 149.1 99 74.7
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 2.8e-34 148.7 99 71.7
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.8e-34 148.7 98 76.5
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.8e-34 148.7 99 73.7
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 3.7e-34 148.3 102 74.5
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 4.9e-34 147.9 99 73.7
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 8.3e-34 147.1 99 70.7
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 8.3e-34 147.1 97 73.2
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 1.1e-33 146.7 106 67.9
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.1e-33 146.7 101 74.3
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.1e-33 146.7 99 70.7
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.1e-33 146.7 99 74.7
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.4e-33 146.4 99 71.7
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.4e-33 146.4 99 72.7
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.4e-33 145.6 97 73.2
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 4.1e-33 144.8 99 69.7
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 4.1e-33 144.8 97 73.2
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 4.1e-33 144.8 97 74.2
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 5.4e-33 144.4 99 70.7
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 7.0e-33 144.1 99 73.7
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 7.0e-33 144.1 97 72.2
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 7.0e-33 144.1 91 78.0
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 7.0e-33 144.1 99 72.7
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 7.0e-33 144.1 99 73.7
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 9.2e-33 143.7 97 73.2
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.2e-32 143.3 99 71.7
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 2.0e-32 142.5 99 70.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.0e-32 142.5 99 68.7
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.0e-32 142.5 99 72.7
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 4.5e-32 141.4 99 67.7
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 4.5e-32 141.4 97 71.1
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 4.5e-32 141.4 89 78.7
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 5.9e-32 141.0 99 72.7
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 7.8e-32 140.6 93 73.1
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 7.8e-32 140.6 97 71.1
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.3e-31 139.8 95 70.5
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.7e-31 139.4 97 70.1
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 2.3e-31 139.0 97 70.1
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 3.8e-31 138.3 101 69.3
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 5.0e-31 137.9 93 73.1
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.3e-30 135.2 104 68.3
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 4.3e-30 134.8 97 67.0
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 5.6e-30 134.4 98 67.3
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 1.2e-29 133.3 98 68.4
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.6e-29 132.9 90 74.4
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.4e-28 129.8 90 71.1
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 1.4e-28 129.8 90 72.2
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 2.3e-28 129.0 93 67.7
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 4.0e-28 128.3 90 71.1
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 4.0e-28 128.3 101 64.4
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 5.2e-28 127.9 90 71.1
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 8.9e-28 127.1 90 70.0
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.2e-27 126.7 74 85.1
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 2.0e-27 125.9 90 68.9
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 3.4e-27 125.2 90 70.0
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 3.4e-27 125.2 90 70.0
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 5.8e-27 124.4 94 70.2
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.3e-26 123.2 93 64.5
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 1.7e-26 122.9 90 67.8
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 4.9e-26 121.3 98 61.2
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 4.9e-26 121.3 99 62.6
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 8.3e-26 120.6 90 67.8
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 8.3e-26 120.6 90 65.6
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 8.3e-26 120.6 90 65.6
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 1.9e-25 119.4 99 67.7
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 2.4e-25 119.0 90 65.6
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 4.1e-25 118.2 90 65.6
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 9.2e-25 117.1 74 77.0
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 4.6e-24 114.8 79 73.4
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.0e-23 113.6 74 77.0
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 3.9e-23 111.7 74 74.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 6.6e-23 110.9 74 74.3
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 9.5e-22 107.1 79 68.4
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.2e-21 106.7 90 63.3
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 2.1e-21 105.9 101 55.4
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.8e-21 105.5 90 63.3
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.6e-21 105.1 74 71.6
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 1.4e-20 103.2 74 67.6
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.3e-20 102.4 74 67.6
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 4.4e-19 98.2 83 60.2
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 7.5e-19 97.4 73 65.8
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.3e-18 96.7 87 66.7
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 2.9e-18 95.5 92 56.5
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 4.6e-16 88.2 62 69.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.3e-15 85.9 96 54.2
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 8.6e-15 84.0 84 51.2
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 2.5e-14 82.4 62 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.6e-13 78.6 77 51.9
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 4.4e-11 71.6 83 51.8
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.7e-10 69.7 62 62.9
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.2e-10 69.3 52 65.4
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.9e-10 68.9 73 50.7
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 3.7e-10 68.6 85 43.5
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 9.5e-06 53.9 80 41.2


User provided reference genes

Program Settings