Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00302 Erythranthe guttata HOM05D003560 ORTHO05D004500 3.7e-252 874.4 446 100.0
Migut.J01389 Erythranthe guttata HOM05D003560 ORTHO05D004500 3.8e-103 379.4 779 35.3
SalBow1G5562 Salvia bowleyana HOM05D003560 ORTHO05D004500 6.0e-101 372.1 845 33.1
Dinv41343 Davidia involucrata HOM05D003560 ORTHO05D004500 1.1e-99 367.9 824 33.6
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 1.6e-98 364.0 850 32.9
MSTRG.19664 Avicennia marina HOM05D003560 ORTHO05D004500 5.8e-96 355.5 847 32.5
GSVIVG01023682001 Vitis vinifera HOM05D003560 ORTHO05D004500 2.9e-95 353.2 767 33.8
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 1.1e-94 351.3 828 32.4
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 2.5e-94 350.1 827 31.8
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 7.1e-94 348.6 829 31.8
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 2.1e-93 347.1 829 32.0
SGA_v2.0_scaffold45G17008 Striga asiatica HOM05D003560 ORTHO05D004500 8.7e-92 341.7 778 33.4
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 2.5e-91 340.1 852 31.3
Dinv42820 Davidia involucrata HOM05D003560 ORTHO05D004500 3.3e-91 339.7 856 31.3
Dinv43280 Davidia involucrata HOM05D003560 ORTHO05D004500 3.3e-91 339.7 856 31.3
HanXRQChr10g0307611 Helianthus annuus HOM05D003560 ORTHO05D004500 3.3e-91 339.7 761 33.0
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 3.3e-91 339.7 853 30.8
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 4.3e-91 339.3 854 30.9
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 1.6e-90 337.4 851 31.0
HanXRQChr12g0357781 Helianthus annuus HOM05D003560 ORTHO05D004500 2.2e-90 337.0 755 32.3
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 1.1e-89 334.7 848 31.2
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 5.3e-89 332.4 871 30.3
Lsat_1_v5_gn_8_64740 Lactuca sativa HOM05D003560 ORTHO05D004500 5.3e-89 332.4 753 32.0
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 5.3e-89 332.4 848 30.8
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 6.9e-89 332.0 732 34.2
HanXRQChr05g0141571 Helianthus annuus HOM05D003560 ORTHO05D004500 6.9e-89 332.0 751 32.8
ECA234G2881 Erigeron canadensis HOM05D003560 ORTHO05D004500 2.6e-88 330.1 766 32.6
CAN.G1190.4 Capsicum annuum HOM05D003560 ORTHO05D004500 4.5e-88 329.3 851 30.4
Lsat_1_v5_gn_5_89080 Lactuca sativa HOM05D003560 ORTHO05D004500 1.0e-87 328.2 749 32.8
unitig_37.g12751 Utricularia gibba HOM05D003560 ORTHO05D004500 2.9e-87 326.6 837 30.8
TAR625G0571 Trochodendron aralioides HOM05D003560 ORTHO05D004500 1.1e-86 324.7 857 29.6
Actinidia20936 Actinidia chinensis HOM05D003560 ORTHO05D004500 3.2e-86 323.2 854 30.6
DCAR_009892 Daucus carota HOM05D003560 ORTHO05D004500 1.2e-85 321.2 845 30.1
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 3.6e-85 319.7 837 29.7
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.6e-85 319.3 838 29.8
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 1.0e-84 318.2 848 29.7
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 1.8e-84 317.4 837 29.6
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 2.3e-84 317.0 837 29.6
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 2.0e-83 313.9 838 29.4
Ciclev10007284m.g Citrus clementina HOM05D003560 ORTHO05D004500 4.3e-83 312.8 853 29.2
Prupe.1G102400 Prunus persica HOM05D003560 ORTHO05D004500 5.7e-83 312.4 848 29.2
Duzib168G0378 Durio zibethinus HOM05D003560 ORTHO05D004500 7.4e-83 312.0 860 29.8
CSS0046771 Camellia sinensis var. sinensis HOM05D003560 ORTHO05D004500 9.7e-83 311.6 823 30.0
vmacro06053 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 9.7e-83 311.6 820 31.2
Atru.chr7.14 Acer truncatum HOM05D003560 ORTHO05D004500 4.8e-82 309.3 861 29.3
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.1e-81 308.1 837 29.2
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 2.4e-81 307.0 851 29.4
CANSAT11G0384 Cannabis sativa HOM05D003560 ORTHO05D004500 3.1e-81 306.6 839 29.1
Manes.06G031700 Manihot esculenta HOM05D003560 ORTHO05D004500 3.1e-81 306.6 856 29.8
Ah.14g084380 Amaranthus hybridus HOM05D003560 ORTHO05D004500 5.3e-81 305.8 723 32.6
Carub.0007s0981 Capsella rubella HOM05D003560 ORTHO05D004500 1.2e-80 304.7 840 29.8
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 2.0e-80 303.9 851 29.4
TAR636G2626 Trochodendron aralioides HOM05D003560 ORTHO05D004500 2.6e-80 303.5 855 29.0
ECA236G1776 Erigeron canadensis HOM05D003560 ORTHO05D004500 3.4e-80 303.1 772 30.2
Thecc.09G153600 Theobroma cacao HOM05D003560 ORTHO05D004500 3.4e-80 303.1 858 29.4
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 4.5e-80 302.8 841 28.9
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 5.9e-80 302.4 771 30.2
Haze_19142 Corylus avellana HOM05D003560 ORTHO05D004500 5.9e-80 302.4 853 29.0
Cfa020786 Carpinus fangiana HOM05D003560 ORTHO05D004500 7.7e-80 302.0 853 28.7
Aqoxy7G03346 Aquilegia oxysepala HOM05D003560 ORTHO05D004500 1.0e-79 301.6 836 29.5
Lj9A721G57 Lonicera japonica HOM05D003560 ORTHO05D004500 1.0e-79 301.6 831 29.8
FAN07G0247 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.3e-79 301.2 857 28.6
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 1.7e-79 300.8 819 30.0
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 1.7e-79 300.8 851 29.3
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 2.2e-79 300.4 854 28.8
QL02p094176 Quercus lobata HOM05D003560 ORTHO05D004500 2.9e-79 300.1 854 28.1
TPR.G24844 Trifolium pratense HOM05D003560 ORTHO05D004500 2.9e-79 300.1 851 28.8
Lalb_Chr13g0300691 Lupinus albus HOM05D003560 ORTHO05D004500 5.0e-79 299.3 840 28.8
DCAR_020090 Daucus carota HOM05D003560 ORTHO05D004500 8.5e-79 298.5 815 29.8
MD13G1257100 Malus domestica HOM05D003560 ORTHO05D004500 1.1e-78 298.1 840 29.2
Oeu024893.2 Olea europaea HOM05D003560 ORTHO05D004500 1.4e-78 297.7 720 31.4
PSO782G3416 Papaver somniferum HOM05D003560 ORTHO05D004500 1.4e-78 297.7 851 28.4
Sp7g28660 Schrenkiella parvula HOM05D003560 ORTHO05D004500 1.4e-78 297.7 842 29.6
Thhalv10024256m.g Eutrema salsugineum HOM05D003560 ORTHO05D004500 1.9e-78 297.4 842 29.7
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 3.2e-78 296.6 841 29.3
Ah.09g228690 Amaranthus hybridus HOM05D003560 ORTHO05D004500 4.2e-78 296.2 835 29.2
AT4G30790 Arabidopsis thaliana HOM05D003560 ORTHO05D004500 4.2e-78 296.2 841 29.7
Lalb_Chr12g0198821 Lupinus albus HOM05D003560 ORTHO05D004500 4.2e-78 296.2 826 28.5
PSO063G7271 Papaver somniferum HOM05D003560 ORTHO05D004500 7.2e-78 295.4 851 28.3
Aa31LG2G19610 Aethionema arabicum HOM05D003560 ORTHO05D004500 9.4e-78 295.0 838 29.1
EL10Ac8g18909 Beta vulgaris HOM05D003560 ORTHO05D004500 9.4e-78 295.0 823 29.4
CiPaw.16G106900 Carya illinoinensis HOM05D003560 ORTHO05D004500 9.4e-78 295.0 856 28.7
Glyma.02G206500 Glycine max HOM05D003560 ORTHO05D004500 1.6e-77 294.3 853 28.0
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 2.1e-77 293.9 833 29.5
Psat7g006640 Pisum sativum HOM05D003560 ORTHO05D004500 2.1e-77 293.9 851 28.6
Rhsim03G0259200 Rhododendron simsii HOM05D003560 ORTHO05D004500 2.7e-77 293.5 826 30.0
TWI34G0709 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 4.7e-77 292.7 801 29.7
C03p88520 Brassica napus HOM05D003560 ORTHO05D004500 6.1e-77 292.4 826 30.1
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 1.0e-76 291.6 855 28.2
BcaC09g51868 Brassica carinata HOM05D003560 ORTHO05D004500 1.4e-76 291.2 819 28.8
A08p19080 Brassica napus HOM05D003560 ORTHO05D004500 1.4e-76 291.2 826 29.8
BolC1t00801H Brassica oleracea HOM05D003560 ORTHO05D004500 1.4e-76 291.2 819 28.8
BcaC01g01140 Brassica carinata HOM05D003560 ORTHO05D004500 1.8e-76 290.8 826 29.8
BolC3t21162H Brassica oleracea HOM05D003560 ORTHO05D004500 1.8e-76 290.8 826 29.8
Phvul.003G153800 Phaseolus vulgaris HOM05D003560 ORTHO05D004500 5.1e-76 289.3 852 28.3
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 8.8e-76 288.5 845 28.0
Lj4g0007617 Lotus japonicus HOM05D003560 ORTHO05D004500 8.8e-76 288.5 836 28.6
C01p08140 Brassica napus HOM05D003560 ORTHO05D004500 2.0e-75 287.3 819 28.6
Ca_21152_v3 Cicer arietinum L. HOM05D003560 ORTHO05D004500 2.6e-75 287.0 848 27.8
BcaNung02741 Brassica carinata HOM05D003560 ORTHO05D004500 3.3e-75 286.6 774 29.5
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 3.3e-75 286.6 775 29.0
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 3.3e-75 286.6 839 28.2
BraA03t15073Z Brassica rapa HOM05D003560 ORTHO05D004500 5.7e-75 285.8 821 29.1
BcaNung01560 Brassica carinata HOM05D003560 ORTHO05D004500 7.4e-75 285.4 832 29.1
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 7.4e-75 285.4 824 28.6
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 7.4e-75 285.4 824 28.6
Nn2g14025 Nelumbo nucifera HOM05D003560 ORTHO05D004500 9.7e-75 285.0 852 28.4
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 1.7e-74 284.3 858 28.9
Medtr4g130370 Medicago truncatula HOM05D003560 ORTHO05D004500 1.7e-74 284.3 854 28.3
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 2.8e-74 283.5 847 28.0
A03p60310 Brassica napus HOM05D003560 ORTHO05D004500 4.8e-74 282.7 821 29.0
Potri.018G103000 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.8e-73 280.8 853 27.8
TWI32G0440 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 4.1e-73 279.6 846 28.3
Hund08956 Selenicereus undatus HOM05D003560 ORTHO05D004500 5.3e-73 279.3 837 28.6
COL.COLO4_05033 Corchorus olitorius HOM05D003560 ORTHO05D004500 9.1e-73 278.5 875 27.5
CsaV3_2G007690 Cucumis sativus L. HOM05D003560 ORTHO05D004500 4.5e-72 276.2 845 27.6
Eucgr.C00241 Eucalyptus grandis HOM05D003560 ORTHO05D004500 4.5e-72 276.2 857 27.7
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 6.5e-71 272.3 844 27.3
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 6.5e-71 272.3 845 27.7
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 1.1e-70 271.6 850 27.5
THA.LOC104803549 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.1e-70 271.6 843 27.6
Sed0019076 Sechium edule HOM05D003560 ORTHO05D004500 5.5e-70 269.2 845 27.3
Hma1.2p1_0222F.1_g093876 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 7.2e-70 268.9 217 60.8
Hma1.2p1_0222F.1_g093910 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 7.2e-70 268.9 217 60.8
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 1.6e-69 267.7 860 27.8
CDE02G1528 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 8.0e-69 265.4 826 27.7
PGR114G0002 Punica granatum HOM05D003560 ORTHO05D004500 3.0e-68 263.5 827 26.7
PGR142G1236 Punica granatum HOM05D003560 ORTHO05D004500 3.0e-68 263.5 827 26.7
THA.LOC104803909 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 8.8e-68 261.9 847 27.6
PGR102G2861 Punica granatum HOM05D003560 ORTHO05D004500 3.3e-67 260.0 841 26.6
CiPaw.15G164500 Carya illinoinensis HOM05D003560 ORTHO05D004500 1.3e-66 258.1 856 27.6
THA.LOC104815517 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.3e-66 258.1 854 27.3
Potri.006G180800 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.7e-66 257.7 857 26.0
AUR62025371 Chenopodium quinoa HOM05D003560 ORTHO05D004500 1.4e-65 254.6 769 29.3
Cpa.g.sc199.20 Carica papaya HOM05D003560 ORTHO05D004500 2.9e-63 246.9 217 54.4
Sc14g0000980 Simmondsia chinensis HOM05D003560 ORTHO05D004500 2.1e-61 240.7 217 54.4
Nn8g40053 Nelumbo nucifera HOM05D003560 ORTHO05D004500 6.8e-60 235.7 215 53.0
arahy.Tifrunner.gnm1.ann1.IP23DV Arachis hypogaea HOM05D003560 ORTHO05D004500 1.7e-58 231.1 357 38.7
CDE05G3326 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 3.7e-58 229.9 264 47.3
MBI14_g08698_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 3.7e-58 229.9 243 51.0
MBI14_g31376_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 3.7e-58 229.9 243 51.0
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 1.6e-56 224.6 842 26.2
SMO301G0012 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.3e-55 221.5 761 25.9
Os02g0179800 Oryza sativa ssp. japonica HOM05D003560 ORTHO05D004500 1.9e-54 217.6 823 25.8
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 8.8e-52 208.8 852 23.0
HPP92_021904 Vanilla planifolia HOM05D003560 ORTHO05D004500 8.8e-52 208.8 202 53.0
Pp3c19_12090 Physcomitrium patens HOM05D003560 ORTHO05D004500 4.4e-51 206.5 246 44.3
Pp3c22_15890 Physcomitrium patens HOM05D003560 ORTHO05D004500 1.8e-49 201.1 216 45.8
Sabra18G0088600 Salix brachista HOM05D003560 ORTHO05D004500 1.7e-47 194.5 762 24.8
Zm00001eb206680 Zea mays HOM05D003560 ORTHO05D004500 6.6e-47 192.6 826 25.1
Zm00001eb233940 Zea mays HOM05D003560 ORTHO05D004500 4.6e-40 169.9 829 24.0
SMO361G0185 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 2.3e-39 167.5 710 24.6
SMO361G0456 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 8.6e-39 165.6 710 24.5
Mapoly0041s0089 Marchantia polymorpha HOM05D003560 ORTHO05D004500 6.1e-37 159.5 848 21.9
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis HOM05D003560 ORTHO05D004500 5.2e-36 156.4 225 38.7
CBR_g55388 Chara braunii HOM05D003560 ORTHO05D004500 2.5e-30 137.5 208 37.5
CBR_g38482 Chara braunii HOM05D003560 ORTHO05D004500 7.3e-30 136.0 214 36.0
vmacro06070 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 6.4e-26 122.9 201 41.3
GSVIVG01023678001 Vitis vinifera HOM05D003560 ORTHO05D004500 2.4e-25 120.9 118 53.4
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 4.7e-21 106.7 250 35.6
Actinidia24369 Actinidia chinensis HOM05D003560 ORTHO05D004500 8.1e-21 105.9 77 67.5
Cre16.g651350 Chlamydomonas reinhardtii HOM05D003560 ORTHO05D004500 3.1e-20 104.0 222 31.1
PRCOL_00000855 Prasinoderma coloniale HOM05D003560 ORTHO05D004500 5.2e-20 103.2 257 26.8
MCO10G226 Micromonas commoda HOM05D003560 ORTHO05D004500 6.8e-20 102.8 207 31.4
BcaC01g01128 Brassica carinata HOM05D003560 ORTHO05D004500 2.2e-18 97.8 116 44.8
Nn2g14361 Nelumbo nucifera HOM05D003560 ORTHO05D004500 7.3e-06 56.2 67 40.3


User provided reference genes

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