Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 1.5e-96 356.3 197 100.0
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 3.7e-42 175.6 195 59.5
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 2.5e-38 162.9 189 56.1
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 5.5e-38 161.8 182 54.4
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 1.2e-37 160.6 191 54.5
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 6.1e-37 158.3 196 52.6
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 9.7e-35 151.0 175 52.6
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.8e-33 146.7 200 49.5
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 3.1e-33 146.0 191 52.9
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 9.0e-33 144.4 182 52.7
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 1.5e-32 143.7 183 47.5
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 2.0e-32 143.3 184 50.0
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 2.6e-32 142.9 185 46.5
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 3.4e-32 142.5 183 50.3
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 4.5e-32 142.1 181 51.4
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 5.9e-32 141.7 191 49.2
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 1.3e-31 140.6 185 51.4
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 1.7e-31 140.2 182 49.5
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 2.2e-31 139.8 186 50.0
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 2.2e-31 139.8 179 46.9
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 2.9e-31 139.4 179 49.7
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 3.8e-31 139.0 179 48.6
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 3.8e-31 139.0 185 48.1
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 5.0e-31 138.7 181 49.7
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 5.0e-31 138.7 199 47.2
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 8.5e-31 137.9 179 49.7
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 1.1e-30 137.5 182 47.8
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 1.4e-30 137.1 183 47.0
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 1.4e-30 137.1 189 46.6
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 1.4e-30 137.1 188 48.4
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 1.9e-30 136.7 191 48.2
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 1.9e-30 136.7 191 48.2
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.9e-30 136.7 181 47.5
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 2.5e-30 136.3 181 48.1
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 4.2e-30 135.6 179 49.2
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 4.2e-30 135.6 182 45.1
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 7.2e-30 134.8 183 46.4
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.2e-29 134.0 181 48.6
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 1.6e-29 133.7 177 48.6
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.6e-29 133.7 177 48.0
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 2.1e-29 133.3 180 47.8
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 2.1e-29 133.3 184 46.7
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 3.6e-29 132.5 184 45.7
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 4.6e-29 132.1 192 45.3
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 6.1e-29 131.7 186 44.1
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 6.1e-29 131.7 178 48.9
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 6.1e-29 131.7 183 44.8
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 1.0e-28 131.0 185 47.0
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 1.0e-28 131.0 178 45.5
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 1.0e-28 131.0 170 47.6
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 1.4e-28 130.6 179 45.8
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 2.3e-28 129.8 181 44.2
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 2.3e-28 129.8 192 42.7
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 3.0e-28 129.4 184 39.7
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 5.1e-28 128.6 186 46.8
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 6.7e-28 128.3 181 45.9
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 8.8e-28 127.9 183 44.8
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 8.8e-28 127.9 191 46.6
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 2.0e-27 126.7 190 45.8
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 3.3e-27 125.9 178 45.5
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 3.3e-27 125.9 178 45.5
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 3.3e-27 125.9 178 45.5
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 3.3e-27 125.9 159 54.7
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 4.3e-27 125.6 179 48.0
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 4.3e-27 125.6 178 46.1
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 4.3e-27 125.6 179 45.3
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 5.7e-27 125.2 179 46.4
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 7.4e-27 124.8 188 45.2
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 1.3e-26 124.0 180 45.6
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 1.3e-26 124.0 177 46.3
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.7e-26 123.6 189 42.9
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 2.2e-26 123.2 191 42.4
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 2.2e-26 123.2 195 43.1
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 2.8e-26 122.9 178 44.9
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 2.8e-26 122.9 180 45.0
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 2.8e-26 122.9 178 44.9
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 2.8e-26 122.9 180 45.0
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 2.8e-26 122.9 189 43.9
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 3.7e-26 122.5 180 45.0
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 3.7e-26 122.5 180 45.0
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 3.7e-26 122.5 183 43.2
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 4.8e-26 122.1 180 43.3
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 4.8e-26 122.1 176 44.3
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 8.2e-26 121.3 180 44.4
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 8.2e-26 121.3 180 44.4
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 1.1e-25 120.9 179 44.7
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.1e-25 120.9 179 44.7
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 1.1e-25 120.9 185 46.5
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 1.1e-25 120.9 178 44.9
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 5.3e-25 118.6 189 43.9
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 6.9e-25 118.2 184 40.8
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 6.9e-25 118.2 183 38.8
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 9.1e-25 117.9 178 43.8
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 2.0e-24 116.7 161 42.9
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 3.4e-24 115.9 160 43.8
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 7.7e-24 114.8 188 43.6
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.0e-23 114.4 184 42.9
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 1.3e-23 114.0 169 47.9
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 1.7e-23 113.6 174 43.7
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 2.2e-23 113.2 173 43.9
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 2.9e-23 112.8 188 43.6
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 2.9e-23 112.8 180 41.1
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 3.8e-23 112.5 174 45.4
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 5.0e-23 112.1 155 45.8
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 1.1e-22 110.9 170 45.9
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 1.9e-22 110.2 181 39.2
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 4.2e-22 109.0 187 42.8
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 5.5e-22 108.6 186 37.1
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 7.2e-22 108.2 184 41.3
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 1.2e-21 107.5 178 38.2
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 1.6e-21 107.1 172 41.9
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.0e-20 104.4 155 44.5
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.4e-20 104.0 172 44.2
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.5e-19 100.5 178 40.4
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 2.0e-19 100.1 161 43.5
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 2.6e-19 99.8 155 42.6
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 3.3e-19 99.4 178 39.3
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 4.4e-19 99.0 173 39.3
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 5.7e-19 98.6 178 38.8
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 5.7e-19 98.6 178 38.8
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 5.7e-19 98.6 184 38.0
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 7.4e-19 98.2 183 38.8
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 2.2e-18 96.7 177 37.3
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 2.2e-18 96.7 178 38.2
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 2.2e-18 96.7 178 38.2
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 3.7e-18 95.9 184 37.0
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 3.7e-18 95.9 190 37.4
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 6.3e-18 95.1 146 45.9
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 1.1e-17 94.4 178 37.6
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 3.1e-17 92.8 175 41.1
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 4.1e-17 92.4 178 37.6
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 4.1e-17 92.4 173 37.6
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 9.1e-17 91.3 165 41.8
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 1.5e-16 90.5 168 42.3
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 1.5e-16 90.5 184 36.4
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 2.0e-16 90.1 174 33.3
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 2.6e-16 89.7 192 35.9
SalBow1G3357 Salvia bowleyana HOM05D004507 ORTHO05D004874 5.0e-15 85.5 97 52.6
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 9.4e-14 81.3 177 37.9
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 1.6e-13 80.5 179 33.0
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 8.0e-13 78.2 138 40.6
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 8.0e-13 78.2 176 34.1
Os02g0791300 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 5.2e-12 75.5 178 33.7
Solyc07g006310.1 Solanum lycopersicum HOM05D004507 ORTHO05D004874 2.0e-11 73.6 46 80.4
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 5.7e-11 72.0 73 54.8
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 1.3e-10 70.9 183 32.2
SEGI_26334 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 6.3e-10 68.6 182 28.6
SEGI_39312 Sequoiadendron giganteum HOM05D004507 ORTHO05D004874 5.3e-09 65.5 182 30.8
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 7.0e-09 65.1 189 30.2
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 3.5e-08 62.8 183 28.4
SEGI_10087 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.0e-07 61.2 183 33.3
CDE02G1081 Ceratophyllum demersum HOM05D001624 ORTHO05D001530 2.9e-07 59.7 155 31.0
MBI07_g21783_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 2.9e-07 59.7 182 29.7
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.9e-07 59.7 198 29.8
Os01g0630300 Oryza sativa ssp. japonica HOM05D006973 ORTHO05D008636 5.0e-07 58.9 153 29.4
Zm00001eb178020 Zea mays HOM05D004507 ORTHO05D004874 6.5e-07 58.5 170 27.6
SHI24759 Sapria himalayana HOM05D016562 ORTHO05D004874 8.5e-07 58.2 41 70.7
unitig_37.g12687 Utricularia gibba HOM05D004507 ORTHO05D004874 8.5e-07 58.2 81 43.2
HPP92_005294 Vanilla planifolia HOM05D001624 ORTHO05D001530 8.5e-07 58.2 143 34.3
SEGI_14977 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.9e-06 57.0 188 28.2
Zm00001eb233860 Zea mays HOM05D004507 ORTHO05D004874 1.9e-06 57.0 55 47.3
SEGI_09603 Sequoiadendron giganteum HOM05D001624 ORTHO05D008636 2.5e-06 56.6 175 32.6
Zm00001eb192600 Zea mays HOM05D004507 ORTHO05D004874 2.5e-06 56.6 168 28.6
MBI10_g03530_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 5.5e-06 55.5 186 31.2
SEGI_30051 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 5.5e-06 55.5 145 31.0


User provided reference genes

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