Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 7.3e-176 620.5 334 100.0
Migut.K00270 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.2e-96 357.5 308 67.5
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 1.1e-41 174.9 325 37.8
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 2.2e-39 167.2 331 35.0
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 2.5e-35 153.7 323 35.3
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 5.5e-30 136.0 323 34.7
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 7.1e-30 135.6 319 33.5
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 6.0e-29 132.5 328 33.2
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 6.7e-28 129.0 232 38.4
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 3.3e-27 126.7 339 31.0
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 3.3e-27 126.7 321 32.1
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 9.6e-27 125.2 326 32.2
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 9.6e-27 125.2 326 32.2
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 4.8e-26 122.9 322 35.1
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 6.2e-26 122.5 325 32.0
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.8e-25 120.9 343 31.5
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 3.1e-25 120.2 323 32.8
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 3.1e-25 120.2 315 33.7
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 7.6e-24 115.5 318 30.2
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 1.0e-23 115.2 318 30.2
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.3e-23 114.8 319 31.3
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 1.7e-23 114.4 325 31.1
PGSC0003DMG400034810 Solanum tuberosum HOM05D004960 ORTHO05D004696 2.9e-23 113.6 233 34.3
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 3.8e-23 113.2 326 31.9
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 8.4e-23 112.1 326 33.1
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 3.2e-22 110.2 335 29.9
Migut.J01427 Erythranthe guttata HOM05D015143 ORTHO05D004696 5.5e-22 109.4 333 33.9
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 7.1e-22 109.0 324 31.5
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 7.1e-22 109.0 325 32.3
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 2.1e-21 107.5 315 31.1
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 2.1e-21 107.5 315 31.1
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 2.1e-21 107.5 331 29.9
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.5e-21 106.7 325 32.9
BolC9t54315H Brassica oleracea HOM05D004960 ORTHO05D004696 3.0e-20 103.6 333 31.5
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 5.1e-20 102.8 314 30.9
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 5.1e-20 102.8 315 26.3
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 8.7e-20 102.1 327 28.1
Migut.J01429 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.1e-19 101.7 333 32.1
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 1.1e-19 101.7 330 30.0
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.9e-19 100.9 331 31.1
BcaC04g22889 Brassica carinata HOM05D004960 ORTHO05D004696 2.5e-19 100.5 331 31.4
C09p14170 Brassica napus HOM05D004960 ORTHO05D004696 2.5e-19 100.5 331 31.4
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 3.3e-19 100.1 339 29.8
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 4.3e-19 99.8 323 31.3
Migut.J01431 Erythranthe guttata HOM05D015143 ORTHO05D004696 5.7e-19 99.4 386 30.3
Oeu037995.1 Olea europaea HOM05D004960 ORTHO05D004696 5.7e-19 99.4 240 32.5
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.3e-18 98.2 325 26.5
A09p12040 Brassica napus HOM05D004960 ORTHO05D004696 1.3e-18 98.2 331 30.8
BraA09t36847Z Brassica rapa HOM05D004960 ORTHO05D004696 1.3e-18 98.2 331 30.8
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 1.3e-18 98.2 318 28.0
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 1.6e-18 97.8 325 30.2
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.8e-18 97.1 322 28.9
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.7e-18 96.7 325 31.7
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 8.2e-18 95.5 322 30.4
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 8.2e-18 95.5 327 29.4
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 1.1e-17 95.1 324 28.1
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 2.4e-17 94.0 307 29.3
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 2.4e-17 94.0 311 27.0
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 4.1e-17 93.2 326 31.3
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 5.3e-17 92.8 319 28.2
SalBow6G6841 Salvia bowleyana HOM05D015143 ORTHO05D004696 9.0e-17 92.0 326 30.7
BcaB07g31648 Brassica carinata HOM05D004960 ORTHO05D004696 1.5e-16 91.3 331 29.6
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 2.0e-16 90.9 331 26.0
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.6e-16 90.5 215 30.2
BcaC04g21483 Brassica carinata HOM05D004960 ORTHO05D004696 3.4e-16 90.1 340 28.8
C09p31280 Brassica napus HOM05D004960 ORTHO05D004696 3.4e-16 90.1 340 28.8
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 3.4e-16 90.1 306 32.7
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 3.4e-16 90.1 320 30.9
AL3G52080 Arabidopsis lyrata HOM05D004960 ORTHO05D004696 7.6e-16 89.0 339 28.6
A04p05570 Brassica napus HOM05D004960 ORTHO05D004696 1.3e-15 88.2 331 27.8
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.7e-15 87.8 304 27.0
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 2.9e-15 87.0 224 32.1
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 3.8e-15 86.7 311 25.4
BraA07t27990Z Brassica rapa HOM05D004960 ORTHO05D004696 3.8e-15 86.7 334 29.0
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 3.8e-15 86.7 318 26.7
HanXRQChr03g0068481 Helianthus annuus HOM05D004960 ORTHO05D004696 5.0e-15 86.3 336 27.7
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 5.0e-15 86.3 319 28.8
BraA04t16256Z Brassica rapa HOM05D004960 ORTHO05D004696 6.5e-15 85.9 336 28.0
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.5e-15 85.9 318 27.7
BolC9t55984H Brassica oleracea HOM05D004960 ORTHO05D004696 1.1e-14 85.1 330 30.3
Carub.0003s3296 Capsella rubella HOM05D004960 ORTHO05D004696 1.1e-14 85.1 343 28.6
A06p33120 Brassica napus HOM05D004960 ORTHO05D004696 1.4e-14 84.7 346 27.7
C07p04050 Brassica napus HOM05D004960 ORTHO05D004696 1.4e-14 84.7 255 30.6
BolC7t40796H Brassica oleracea HOM05D004960 ORTHO05D004696 1.9e-14 84.3 251 30.3
BraA06t26242Z Brassica rapa HOM05D004960 ORTHO05D004696 1.9e-14 84.3 356 27.0
Thhalv10022778m.g Eutrema salsugineum HOM05D004960 ORTHO05D004696 1.9e-14 84.3 339 30.7
SalBow6G3434 Salvia bowleyana HOM05D015143 ORTHO05D004696 1.9e-14 84.3 330 30.6
A07p01900 Brassica napus HOM05D004960 ORTHO05D004696 3.2e-14 83.6 269 30.5
C04p38300 Brassica napus HOM05D004960 ORTHO05D004696 3.2e-14 83.6 339 27.4
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 3.2e-14 83.6 219 30.6
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.2e-14 83.2 318 27.7
Sp3g32170 Schrenkiella parvula HOM05D004960 ORTHO05D004696 9.3e-14 82.0 254 30.7
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 9.3e-14 82.0 318 26.1
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 1.2e-13 81.6 307 26.4
C03p59340 Brassica napus HOM05D004960 ORTHO05D004696 1.6e-13 81.3 336 28.0
AT2G18690 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 2.1e-13 80.9 334 27.8
BcaB03g16662 Brassica carinata HOM05D004960 ORTHO05D004696 2.7e-13 80.5 340 28.8
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 2.7e-13 80.5 307 26.4
Peaxi162Scf00457g00315 Petunia axillaris HOM05D004960 ORTHO05D004696 2.7e-13 80.5 132 34.8
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.6e-13 80.1 319 27.0
ECA240G0411 Erigeron canadensis HOM05D004960 ORTHO05D004696 4.6e-13 79.7 316 30.4
Prupe.1G095800 Prunus persica HOM05D004960 ORTHO05D004696 6.1e-13 79.3 120 40.0
CARHR109270 Cardamine hirsuta HOM05D004960 ORTHO05D004696 7.9e-13 79.0 328 26.2
SalBow6G5998 Salvia bowleyana HOM05D050058 ORTHO05D004696 7.9e-13 79.0 318 29.6
Dinv42772 Davidia involucrata HOM05D004960 ORTHO05D004696 1.0e-12 78.6 368 28.3
SalBow6G0476 Salvia bowleyana HOM05D004960 ORTHO05D004696 1.0e-12 78.6 331 31.1
BcaC01g02853 Brassica carinata HOM05D004960 ORTHO05D004696 1.3e-12 78.2 346 28.3
BolC3t18198H Brassica oleracea HOM05D004960 ORTHO05D004696 1.3e-12 78.2 346 28.3
SalBow6G2608 Salvia bowleyana HOM05D050058 ORTHO05D004696 1.3e-12 78.2 318 29.2
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.3e-12 77.4 265 31.3
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.0e-12 77.0 312 26.6
Aqoxy7G03204 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 3.9e-12 76.6 338 25.1
Carub.0003s3294 Capsella rubella HOM05D004960 ORTHO05D004696 5.1e-12 76.3 230 30.4
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 5.1e-12 76.3 308 27.3
Cpa.g.c29666.2 Carica papaya HOM05D004960 ORTHO05D004696 8.7e-12 75.5 305 31.5
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.1e-11 75.1 215 28.8
BcaB08g34825 Brassica carinata HOM05D004960 ORTHO05D004696 2.5e-11 73.9 344 27.0
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 9.7e-11 72.0 324 25.6
Actinidia35990 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.3e-10 71.6 160 32.5
BcaC02g09087 Brassica carinata HOM05D004960 ORTHO05D004696 1.3e-10 71.6 336 27.1
Migut.J01428 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.3e-10 71.6 338 28.7
HanXRQChr03g0068521 Helianthus annuus HOM05D004960 ORTHO05D004696 2.2e-10 70.9 241 27.4
Manes.13G066000 Manihot esculenta HOM05D004960 ORTHO05D004696 2.2e-10 70.9 214 30.4
Aqoxy7G03206 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 4.8e-10 69.7 249 26.9
Gohir.D03G061900 Gossypium hirsutum HOM05D001062 ORTHO05D000884 4.8e-10 69.7 309 23.3
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 4.8e-10 69.7 318 26.7
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 4.8e-10 69.7 318 26.7
Gorai.013G106700 Gossypium raimondii HOM05D001062 ORTHO05D000884 6.3e-10 69.3 309 23.3
Cpa.g.sc75.10 Carica papaya HOM05D004960 ORTHO05D004696 1.1e-09 68.6 208 34.1
CDE04G1275 Ceratophyllum demersum HOM05D000122 ORTHO05D000139 1.4e-09 68.2 289 27.7
AT2G18680 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 1.8e-09 67.8 267 28.5
Gorai.005G084100 Gossypium raimondii HOM05D001062 ORTHO05D000884 2.4e-09 67.4 315 27.6
Gohir.D02G074800 Gossypium hirsutum HOM05D001062 ORTHO05D000884 3.1e-09 67.0 315 27.0
Nn3g16144 Nelumbo nucifera HOM05D001062 ORTHO05D000884 4.1e-09 66.6 314 25.5
Nn3g17062 Nelumbo nucifera HOM05D001062 ORTHO05D000884 4.1e-09 66.6 314 25.5
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 5.3e-09 66.2 308 24.0
Duzib093G0038 Durio zibethinus HOM05D001062 ORTHO05D000884 6.9e-09 65.9 310 26.5
PGR084G0002 Punica granatum HOM05D004960 ORTHO05D004696 9.1e-09 65.5 333 27.9
PGR142G0218 Punica granatum HOM05D004960 ORTHO05D004696 9.1e-09 65.5 333 27.9
Gohir.A02G108900 Gossypium hirsutum HOM05D001062 ORTHO05D000884 1.2e-08 65.1 309 23.0
Duzib116G0744 Durio zibethinus HOM05D001062 ORTHO05D000884 1.5e-08 64.7 323 25.7
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 1.5e-08 64.7 229 27.1
Potri.002G074200 Populus trichocarpa HOM05D001062 ORTHO05D000884 1.5e-08 64.7 216 25.9
HanXRQChr03g0074171 Helianthus annuus HOM05D012567 ORTHO05D004696 2.0e-08 64.3 319 25.1
Oeu004239.1 Olea europaea HOM05D001062 ORTHO05D000884 2.6e-08 63.9 207 28.5
Psat6g039680 Pisum sativum HOM05D001062 ORTHO05D000884 2.6e-08 63.9 234 31.6
Nn5g28536 Nelumbo nucifera HOM05D001062 ORTHO05D000884 4.5e-08 63.2 307 23.1
Thecc.08G139400 Theobroma cacao HOM05D001062 ORTHO05D000884 4.5e-08 63.2 205 28.3
HPP92_010759 Vanilla planifolia HOM05D004960 ORTHO05D004696 4.5e-08 63.2 298 27.2
Carub.0003s2660 Capsella rubella HOM05D004960 ORTHO05D004696 7.7e-08 62.4 215 27.9
Gohir.A02G068205 Gossypium hirsutum HOM05D001062 ORTHO05D000884 7.7e-08 62.4 315 26.0
Gohir.D05G242200 Gossypium hirsutum HOM05D001062 ORTHO05D000884 7.7e-08 62.4 239 26.4
HanXRQChr09g0244301 Helianthus annuus HOM05D012567 ORTHO05D004696 1.0e-07 62.0 304 26.0
Ciclev10001753m.g Citrus clementina HOM05D001062 ORTHO05D000884 1.7e-07 61.2 219 29.2
Cc10_g12610 Coffea canephora HOM05D001062 ORTHO05D000884 1.7e-07 61.2 316 21.8
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.7e-07 61.2 316 26.6
CSS0019658 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 2.2e-07 60.8 213 26.3
Duzib041G0457 Durio zibethinus HOM05D001062 ORTHO05D000884 2.2e-07 60.8 311 26.0
HPP92_003071 Vanilla planifolia HOM05D004960 ORTHO05D004696 2.2e-07 60.8 250 28.0
Migut.L00876 Erythranthe guttata HOM05D001062 ORTHO05D000884 2.9e-07 60.5 321 24.9
PGR042G3842 Punica granatum HOM05D001062 ORTHO05D000884 2.9e-07 60.5 309 26.9
Cfa018388 Carpinus fangiana HOM05D001062 ORTHO05D000884 3.8e-07 60.1 309 23.0
Migut.L00962 Erythranthe guttata HOM05D001062 ORTHO05D000884 3.8e-07 60.1 321 25.2
SalBow1G3390 Salvia bowleyana HOM05D001062 ORTHO05D000884 3.8e-07 60.1 214 27.1
TAR381G1261 Trochodendron aralioides HOM05D001062 ORTHO05D000884 6.5e-07 59.3 210 26.7
Lj1g0008489 Lotus japonicus HOM05D001062 ORTHO05D000884 8.5e-07 58.9 312 24.0
Lj1g0023946 Lotus japonicus HOM05D001062 ORTHO05D000884 8.5e-07 58.9 223 24.7
Nn1g06273 Nelumbo nucifera HOM05D001062 ORTHO05D000884 1.1e-06 58.5 310 23.9
Gohir.D05G242050 Gossypium hirsutum HOM05D001062 ORTHO05D000884 1.4e-06 58.2 330 23.9
HanXRQChr16g0510881 Helianthus annuus HOM05D001062 ORTHO05D000884 1.4e-06 58.2 311 26.4
Lsat_1_v5_gn_7_52601 Lactuca sativa HOM05D012567 ORTHO05D004696 1.4e-06 58.2 322 26.4
Lsat_1_v5_gn_7_52621 Lactuca sativa HOM05D012567 ORTHO05D004696 1.4e-06 58.2 321 25.5
Atru.chr12.164 Acer truncatum HOM05D004960 ORTHO05D004696 1.9e-06 57.8 307 28.7
Manes.02G173000 Manihot esculenta HOM05D001062 ORTHO05D000884 1.9e-06 57.8 313 24.3
Cfa002899 Carpinus fangiana HOM05D001062 ORTHO05D000884 3.2e-06 57.0 313 25.6
Migut.C01098 Erythranthe guttata HOM05D001062 ORTHO05D000884 3.2e-06 57.0 233 26.6
PSO541G0590 Papaver somniferum HOM05D001062 ORTHO05D000884 3.2e-06 57.0 228 26.8
TWI12G0285 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 3.2e-06 57.0 226 25.7
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.5e-06 56.2 130 33.8
Migut.L00874 Erythranthe guttata HOM05D001062 ORTHO05D000884 7.2e-06 55.8 327 23.5
TAR626G1419 Trochodendron aralioides HOM05D004960 ORTHO05D004696 7.2e-06 55.8 221 24.4
Cpa.g.sc42.160 Carica papaya HOM05D001062 ORTHO05D000884 9.4e-06 55.5 321 24.0
Haze_17678 Corylus avellana HOM05D001062 ORTHO05D000884 9.4e-06 55.5 208 28.4
Lalb_Chr08g0240871 Lupinus albus HOM05D001062 ORTHO05D000884 9.4e-06 55.5 211 30.3
Sc06g0003000 Simmondsia chinensis HOM05D001062 ORTHO05D000884 9.4e-06 55.5 319 25.1


User provided reference genes

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