Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00270 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.1e-151 540.0 292 100.0
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 4.5e-97 358.6 308 67.5
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 5.4e-34 149.1 294 37.1
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 4.0e-29 132.9 298 33.2
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 9.0e-29 131.7 296 33.8
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 1.3e-27 127.9 232 35.8
PGSC0003DMG400034810 Solanum tuberosum HOM05D004960 ORTHO05D004696 2.3e-24 117.1 226 33.2
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.7e-24 115.5 238 32.4
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 4.3e-23 112.8 307 29.3
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 1.3e-22 111.3 248 32.7
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 6.2e-22 109.0 307 33.2
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 5.3e-21 105.9 294 30.3
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 6.9e-21 105.5 221 33.9
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 6.9e-21 105.5 291 32.3
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 1.5e-20 104.4 309 28.5
Oeu037995.1 Olea europaea HOM05D004960 ORTHO05D004696 2.0e-20 104.0 240 34.6
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 5.8e-20 102.4 301 30.2
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 1.7e-19 100.9 301 28.6
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 3.8e-19 99.8 301 28.2
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 3.8e-19 99.8 301 28.2
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.5e-18 97.1 291 29.6
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 3.2e-18 96.7 307 31.3
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 3.2e-18 96.7 307 31.3
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 4.2e-18 96.3 297 31.0
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 5.5e-18 95.9 304 29.3
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 5.5e-18 95.9 296 28.7
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 7.1e-18 95.5 295 28.8
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 1.2e-17 94.7 297 30.3
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 1.6e-17 94.4 295 28.8
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.1e-17 94.0 287 27.9
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 6.0e-17 92.4 311 28.9
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 7.9e-17 92.0 304 28.0
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 1.0e-16 91.7 305 28.5
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 1.8e-16 90.9 220 31.8
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 2.3e-16 90.5 300 27.7
BolC9t54315H Brassica oleracea HOM05D004960 ORTHO05D004696 2.3e-16 90.5 223 33.6
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 2.3e-16 90.5 314 30.9
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 2.3e-16 90.5 306 27.5
Carub.0003s3296 Capsella rubella HOM05D004960 ORTHO05D004696 3.0e-16 90.1 314 30.3
BcaC04g22889 Brassica carinata HOM05D004960 ORTHO05D004696 1.1e-15 88.2 273 31.5
A09p12040 Brassica napus HOM05D004960 ORTHO05D004696 1.1e-15 88.2 273 30.8
C09p14170 Brassica napus HOM05D004960 ORTHO05D004696 1.1e-15 88.2 273 31.5
BraA09t36847Z Brassica rapa HOM05D004960 ORTHO05D004696 1.1e-15 88.2 273 30.8
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 1.1e-15 88.2 309 27.2
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 1.5e-15 87.8 309 30.1
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 1.5e-15 87.8 296 30.1
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 3.3e-15 86.7 303 29.4
A04p05570 Brassica napus HOM05D004960 ORTHO05D004696 5.7e-15 85.9 222 32.9
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 5.7e-15 85.9 308 28.2
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 5.7e-15 85.9 299 27.8
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 5.7e-15 85.9 300 28.0
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 7.4e-15 85.5 285 30.2
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 9.7e-15 85.1 303 29.4
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 9.7e-15 85.1 289 27.0
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 1.3e-14 84.7 304 24.3
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 3.7e-14 83.2 282 28.7
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 3.7e-14 83.2 232 30.6
Sp3g32170 Schrenkiella parvula HOM05D004960 ORTHO05D004696 3.7e-14 83.2 261 30.7
Migut.J01431 Erythranthe guttata HOM05D015143 ORTHO05D004696 6.3e-14 82.4 309 31.4
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 8.2e-14 82.0 287 30.0
Peaxi162Scf00457g00315 Petunia axillaris HOM05D004960 ORTHO05D004696 1.4e-13 81.3 115 35.7
BcaB07g31648 Brassica carinata HOM05D004960 ORTHO05D004696 1.8e-13 80.9 271 28.4
C04p38300 Brassica napus HOM05D004960 ORTHO05D004696 1.8e-13 80.9 293 27.6
BraA04t16256Z Brassica rapa HOM05D004960 ORTHO05D004696 1.8e-13 80.9 293 27.6
SalBow6G0476 Salvia bowleyana HOM05D004960 ORTHO05D004696 1.8e-13 80.9 295 28.8
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.4e-13 80.5 304 28.6
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.4e-13 80.5 239 33.9
A07p01900 Brassica napus HOM05D004960 ORTHO05D004696 4.1e-13 79.7 249 27.7
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 4.1e-13 79.7 305 28.2
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 9.0e-13 78.6 227 29.5
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 1.2e-12 78.2 226 27.4
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.2e-12 78.2 235 30.2
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 1.2e-12 78.2 264 28.4
SalBow6G6841 Salvia bowleyana HOM05D015143 ORTHO05D004696 1.2e-12 78.2 204 33.8
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.5e-12 77.8 213 30.5
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.5e-12 77.8 260 27.7
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 1.5e-12 77.8 215 28.4
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 2.0e-12 77.4 294 26.9
Actinidia35990 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.6e-12 77.0 132 34.1
BcaC04g21483 Brassica carinata HOM05D004960 ORTHO05D004696 2.6e-12 77.0 249 27.7
C09p31280 Brassica napus HOM05D004960 ORTHO05D004696 2.6e-12 77.0 249 27.7
BraA07t27990Z Brassica rapa HOM05D004960 ORTHO05D004696 2.6e-12 77.0 301 26.6
HanXRQChr03g0068481 Helianthus annuus HOM05D004960 ORTHO05D004696 2.6e-12 77.0 294 25.5
Aqoxy7G03206 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 4.5e-12 76.3 218 28.9
Prupe.1G095800 Prunus persica HOM05D004960 ORTHO05D004696 4.5e-12 76.3 113 38.9
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 5.9e-12 75.9 227 27.8
BolC7t40796H Brassica oleracea HOM05D004960 ORTHO05D004696 1.0e-11 75.1 248 26.6
C07p04050 Brassica napus HOM05D004960 ORTHO05D004696 1.3e-11 74.7 269 26.0
HanXRQChr03g0068521 Helianthus annuus HOM05D004960 ORTHO05D004696 1.3e-11 74.7 234 26.9
HPP92_010759 Vanilla planifolia HOM05D004960 ORTHO05D004696 1.3e-11 74.7 221 33.9
Cpa.g.c29666.2 Carica papaya HOM05D004960 ORTHO05D004696 1.7e-11 74.3 292 31.5
SalBow6G3434 Salvia bowleyana HOM05D015143 ORTHO05D004696 3.8e-11 73.2 204 33.8
A06p33120 Brassica napus HOM05D004960 ORTHO05D004696 8.5e-11 72.0 309 26.2
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 1.1e-10 71.6 224 30.4
BcaB03g16662 Brassica carinata HOM05D004960 ORTHO05D004696 1.4e-10 71.2 250 28.4
BcaC02g09087 Brassica carinata HOM05D004960 ORTHO05D004696 1.4e-10 71.2 293 27.3
BolC9t55984H Brassica oleracea HOM05D004960 ORTHO05D004696 1.9e-10 70.9 301 27.2
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.9e-10 70.9 227 28.2
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 5.5e-10 69.3 241 25.7
ECA240G0411 Erigeron canadensis HOM05D004960 ORTHO05D004696 5.5e-10 69.3 303 28.1
Aqoxy7G03204 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 9.3e-10 68.6 302 25.2
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 9.3e-10 68.6 230 27.4
AL3G52080 Arabidopsis lyrata HOM05D004960 ORTHO05D004696 1.2e-09 68.2 292 25.3
CDE04G1275 Ceratophyllum demersum HOM05D000122 ORTHO05D000139 1.2e-09 68.2 289 26.0
Migut.J01427 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.2e-09 68.2 311 30.2
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.1e-09 67.4 240 25.0
C03p59340 Brassica napus HOM05D004960 ORTHO05D004696 2.7e-09 67.0 313 24.9
Cpa.g.sc75.10 Carica papaya HOM05D004960 ORTHO05D004696 3.6e-09 66.6 241 31.5
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.6e-09 66.6 226 25.7
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.6e-09 66.6 223 27.4
Dinv42772 Davidia involucrata HOM05D004960 ORTHO05D004696 4.6e-09 66.2 265 29.1
Thhalv10022778m.g Eutrema salsugineum HOM05D004960 ORTHO05D004696 6.1e-09 65.9 236 28.4
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 7.9e-09 65.5 309 26.5
CARHR109270 Cardamine hirsuta HOM05D004960 ORTHO05D004696 7.9e-09 65.5 299 26.1
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 1.8e-08 64.3 273 26.7
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 2.3e-08 63.9 292 27.4
SalBow6G1594 Salvia bowleyana HOM05D004960 ORTHO05D004696 2.3e-08 63.9 189 30.2
BraA06t26242Z Brassica rapa HOM05D004960 ORTHO05D004696 3.0e-08 63.5 309 24.6
AT2G18680 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 3.9e-08 63.2 302 24.5
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 3.9e-08 63.2 273 26.7
BcaC01g02853 Brassica carinata HOM05D004960 ORTHO05D004696 6.7e-08 62.4 309 24.6
BolC3t18198H Brassica oleracea HOM05D004960 ORTHO05D004696 6.7e-08 62.4 309 24.6
Carub.0003s3294 Capsella rubella HOM05D004960 ORTHO05D004696 1.1e-07 61.6 255 25.5
Manes.13G066000 Manihot esculenta HOM05D004960 ORTHO05D004696 1.5e-07 61.2 209 28.2
SalBow6G5926 Salvia bowleyana HOM05D015143 ORTHO05D004696 1.5e-07 61.2 133 36.8
AT2G18690 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 3.3e-07 60.1 303 25.7
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 5.7e-07 59.3 234 30.3
PGR084G0002 Punica granatum HOM05D004960 ORTHO05D004696 9.7e-07 58.5 303 28.1
PGR142G0218 Punica granatum HOM05D004960 ORTHO05D004696 9.7e-07 58.5 303 28.1
HanXRQChr03g0074171 Helianthus annuus HOM05D012567 ORTHO05D004696 2.8e-06 57.0 284 27.8
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 3.7e-06 56.6 230 25.7
Migut.J01428 Erythranthe guttata HOM05D015143 ORTHO05D004696 3.7e-06 56.6 256 29.7
BcaB08g34825 Brassica carinata HOM05D004960 ORTHO05D004696 6.3e-06 55.8 309 24.3
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 6.3e-06 55.8 210 28.6
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 8.2e-06 55.5 210 28.6


User provided reference genes

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