Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 5.6e-75 284.3 151 100.0
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 4.6e-45 184.9 148 70.9
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 2.3e-44 182.6 151 68.2
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.9e-44 181.8 152 69.1
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 2.2e-39 166.0 151 62.3
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 7.2e-38 161.0 155 59.4
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.0e-36 157.1 151 59.6
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 2.3e-36 156.0 149 60.4
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 5.7e-35 151.4 151 60.3
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 9.7e-35 150.6 150 60.0
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 2.2e-34 149.4 151 57.6
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 6.3e-34 147.9 150 60.0
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.1e-33 147.1 150 60.0
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 2.4e-33 146.0 150 59.3
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 6.9e-33 144.4 142 59.2
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.5e-32 141.7 149 55.7
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.0e-31 140.6 144 56.9
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 1.0e-31 140.6 129 60.5
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.0e-31 140.6 120 65.0
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.7e-31 139.8 142 57.0
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 2.2e-31 139.4 156 56.4
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 3.8e-31 138.7 150 57.3
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 3.8e-31 138.7 150 58.0
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 3.8e-31 138.7 151 57.6
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 6.5e-31 137.9 149 54.4
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 6.5e-31 137.9 146 58.9
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 8.5e-31 137.5 147 55.1
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.1e-30 137.1 142 55.6
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 1.1e-30 137.1 151 55.6
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.1e-30 137.1 141 58.2
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.9e-30 136.3 150 57.3
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.9e-30 136.3 151 56.3
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 4.2e-30 135.2 126 62.7
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 5.5e-30 134.8 149 58.4
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 9.4e-30 134.0 151 55.0
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 2.7e-29 132.5 147 54.4
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 2.7e-29 132.5 118 64.4
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.6e-29 131.7 122 60.7
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 4.6e-29 131.7 153 52.9
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 4.6e-29 131.7 143 55.9
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 6.1e-29 131.3 109 67.9
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 7.9e-29 131.0 122 59.8
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 7.9e-29 131.0 151 54.3
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.0e-28 130.6 134 57.5
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.4e-28 130.2 155 54.8
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.8e-28 129.8 114 62.3
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 1.8e-28 129.8 122 59.8
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 2.3e-28 129.4 155 56.8
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 3.0e-28 129.0 151 55.0
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 3.9e-28 128.6 149 55.7
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 3.9e-28 128.6 104 69.2
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 3.9e-28 128.6 119 60.5
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 5.1e-28 128.3 150 55.3
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 6.7e-28 127.9 102 72.5
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 6.7e-28 127.9 158 51.3
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.1e-27 127.1 115 63.5
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.5e-27 126.7 149 51.0
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.6e-27 125.9 139 55.4
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 4.4e-27 125.2 117 62.4
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 5.7e-27 124.8 139 54.7
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 7.4e-27 124.4 114 61.4
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 9.7e-27 124.0 140 53.6
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.7e-26 123.2 115 61.7
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 2.2e-26 122.9 86 77.9
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 2.8e-26 122.5 122 58.2
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 2.8e-26 122.5 149 55.0
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 2.8e-26 122.5 119 58.8
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 3.7e-26 122.1 154 48.1
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 3.7e-26 122.1 130 56.2
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 6.3e-26 121.3 149 55.0
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.1e-25 120.6 114 60.5
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.1e-25 120.6 114 61.4
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.1e-25 120.6 114 61.4
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 1.4e-25 120.2 139 55.4
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 2.4e-25 119.4 129 53.5
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 4.1e-25 118.6 114 60.5
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 5.3e-25 118.2 106 66.0
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 6.9e-25 117.9 96 67.7
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 6.9e-25 117.9 140 54.3
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 2.6e-24 115.9 98 66.3
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.0e-23 114.0 102 64.7
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.9e-23 112.5 163 50.9
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.8e-23 112.1 149 49.7
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.4e-22 110.2 110 57.3
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 2.5e-22 109.4 114 57.9
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 4.2e-22 108.6 84 72.6
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 4.2e-22 108.6 112 58.9
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 5.5e-22 108.2 149 50.3
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 7.2e-22 107.8 159 48.4
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 9.4e-22 107.5 139 54.0
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.6e-21 106.7 74 78.4
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 3.6e-21 105.5 85 70.6
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 3.0e-20 102.4 76 73.7
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.9e-20 102.1 72 76.4
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 8.8e-20 100.9 86 64.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.0e-19 99.8 112 53.6
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 4.4e-19 98.6 111 51.4
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 7.4e-19 97.8 120 48.3
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 4.8e-18 95.1 111 51.4
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.1e-17 94.0 71 73.2
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 3.1e-17 92.4 102 53.9
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 9.1e-17 90.9 65 75.4
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 4.5e-16 88.6 101 53.5
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 8.5e-15 84.3 75 62.7
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 9.4e-14 80.9 92 50.0
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 3.6e-13 79.0 103 42.7
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 5.7e-11 71.6 49 73.5
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.7e-10 70.1 57 64.9
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 4.8e-10 68.6 104 44.2


User provided reference genes

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