Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.4e-210 736.1 391 100.0
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 8.9e-141 504.2 396 65.9
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.9e-130 469.9 378 63.8
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 9.6e-127 457.6 378 62.7
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.3e-123 447.2 379 60.9
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.2e-123 446.4 377 60.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.2e-123 446.4 381 62.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 6.4e-123 444.9 377 62.9
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 6.0e-121 438.3 380 60.5
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 7.9e-121 438.0 382 60.2
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-119 434.1 371 60.1
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-119 433.7 392 59.2
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.9e-119 433.3 381 58.3
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 5.6e-119 431.8 373 59.8
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 5.6e-119 431.8 445 54.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 5.6e-119 431.8 389 58.1
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.6e-118 430.3 371 60.1
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.6e-118 429.1 378 59.8
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 6.2e-118 428.3 377 58.4
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 8.1e-118 427.9 378 60.1
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 1.1e-117 427.6 378 59.5
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.4e-117 426.4 380 57.6
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 9.0e-117 424.5 377 58.4
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.5e-116 423.7 372 58.1
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 5.8e-116 421.8 368 58.7
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 5.8e-116 421.8 375 59.5
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 9.9e-116 421.0 389 58.4
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.3e-115 420.6 372 59.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.3e-115 420.6 377 58.6
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.7e-115 420.2 372 59.1
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 8.4e-115 417.9 374 58.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.4e-114 417.2 378 58.5
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.4e-114 417.2 375 58.9
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.4e-114 417.2 392 56.9
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.9e-114 416.8 375 58.9
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.4e-114 416.4 374 57.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 3.2e-114 416.0 376 58.2
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 5.5e-114 415.2 374 57.0
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.5e-114 415.2 376 59.0
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.6e-113 413.7 373 57.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.1e-113 413.3 371 58.5
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 4.6e-113 412.1 396 56.3
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.8e-112 410.2 377 57.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.3e-112 409.8 394 55.8
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 3.9e-112 409.1 373 56.3
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 8.7e-112 407.9 373 56.3
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 3.3e-111 406.0 376 57.7
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 7.4e-111 404.8 376 57.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 9.6e-111 404.4 376 57.4
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.3e-110 404.1 382 58.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 4.8e-110 402.1 377 57.3
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.8e-110 402.1 381 57.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.1e-110 401.4 379 57.0
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.4e-109 400.6 381 55.4
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.6e-108 396.4 380 56.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.6e-108 396.4 376 55.3
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 5.8e-108 395.2 323 62.5
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 5.8e-108 395.2 382 55.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 5.8e-108 395.2 379 56.2
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.0e-107 394.4 336 58.6
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 6.5e-107 391.7 341 58.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.9e-106 390.2 382 54.5
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.9e-106 390.2 339 59.0
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 3.2e-106 389.4 339 59.0
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 2.1e-105 386.7 391 55.0
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 7.9e-105 384.8 383 54.3
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.3e-104 384.0 357 57.1
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.3e-104 384.0 388 54.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.3e-104 384.0 381 54.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 5.1e-104 382.1 379 54.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 6.7e-104 381.7 383 53.5
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.1e-103 380.9 372 54.0
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.5e-103 380.6 387 53.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.5e-103 379.8 372 54.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 4.3e-103 379.0 339 55.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.6e-102 377.1 374 55.1
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.7e-102 375.9 287 63.8
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 4.8e-102 375.6 294 64.3
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.1e-101 372.9 337 57.6
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.0e-99 367.9 375 51.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.0e-99 367.9 372 53.2
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.2e-99 366.7 361 55.7
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.8e-99 365.9 372 53.0
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 8.4e-99 364.8 372 52.7
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.5e-97 359.4 276 62.3
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 8.2e-94 348.2 280 65.0
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.4e-93 346.7 412 47.6
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 4.5e-92 342.4 290 59.7
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.0e-91 339.0 374 51.6
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.6e-89 334.0 269 64.3
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 3.9e-88 329.3 380 49.5
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.5e-87 327.4 314 53.2
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 8.2e-86 321.6 335 50.7
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.8e-85 320.5 243 68.3
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 9.1e-85 318.2 335 51.0
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.2e-84 317.8 281 56.6
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 3.4e-84 316.2 240 65.8
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.9e-82 310.5 297 54.9
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 6.1e-81 305.4 371 46.6
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.7e-78 296.2 306 52.6
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-77 293.1 252 62.7
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.6e-76 290.8 313 48.9
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 5.0e-75 285.8 338 47.3
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 8.5e-75 285.0 180 75.0
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 8.0e-73 278.5 291 49.8
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 3.0e-72 276.6 176 76.1
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.2e-52 211.5 226 50.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 2.0e-44 184.1 199 55.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 7.8e-44 182.2 265 41.1
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.6e-41 173.3 177 54.8
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 5.2e-40 169.5 204 45.1
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.5e-39 167.9 220 45.5
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 9.2e-37 158.7 147 59.2
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 7.8e-36 155.6 186 45.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.9e-27 126.7 69 85.5
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 8.4e-14 82.4 107 38.3
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 5.6e-10 69.7 49 61.2
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 8.1e-09 65.9 55 52.7


User provided reference genes

Program Settings