Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.4e-66 256.1 127 100.0
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 4.9e-40 167.9 140 63.6
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 5.4e-39 164.5 138 62.3
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 7.1e-39 164.1 143 62.9
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 2.3e-37 159.1 117 73.5
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 6.2e-35 151.0 137 63.5
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 9.0e-34 147.1 127 64.6
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 9.9e-33 143.7 127 63.8
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 1.4e-31 139.8 134 57.5
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 7.1e-31 137.5 153 54.9
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 2.1e-30 136.0 131 57.3
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 2.7e-30 135.6 125 63.2
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 6.0e-30 134.4 134 56.0
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 6.0e-30 134.4 124 62.1
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 1.0e-29 133.7 132 53.8
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 1.0e-29 133.7 132 53.8
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 2.3e-29 132.5 109 66.1
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 6.7e-29 131.0 135 52.6
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 1.1e-28 130.2 115 62.6
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 1.5e-28 129.8 132 52.3
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 2.5e-28 129.0 132 52.3
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 2.5e-28 129.0 132 52.3
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 4.3e-28 128.3 132 51.5
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 5.6e-28 127.9 129 51.9
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 9.6e-28 127.1 127 55.9
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 9.6e-28 127.1 135 54.1
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 1.3e-27 126.7 135 52.6
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 2.1e-27 125.9 133 51.9
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 2.1e-27 125.9 117 54.7
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 2.1e-27 125.9 132 51.5
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 2.8e-27 125.6 132 53.0
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 2.8e-27 125.6 142 54.9
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 3.7e-27 125.2 161 51.6
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 4.8e-27 124.8 133 51.1
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 6.2e-27 124.4 126 55.6
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 6.2e-27 124.4 132 50.8
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 6.2e-27 124.4 146 49.3
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 8.2e-27 124.0 133 51.9
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 1.1e-26 123.6 131 54.2
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 1.4e-26 123.2 133 50.4
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 1.8e-26 122.9 136 52.9
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 2.4e-26 122.5 134 51.5
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 3.1e-26 122.1 132 50.0
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 3.1e-26 122.1 139 52.5
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 4.0e-26 121.7 116 54.3
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 4.0e-26 121.7 142 48.6
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 4.0e-26 121.7 134 53.0
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 5.3e-26 121.3 133 51.1
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 5.3e-26 121.3 124 58.1
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 5.3e-26 121.3 147 51.7
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 5.3e-26 121.3 125 54.4
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 6.9e-26 120.9 128 54.7
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 9.0e-26 120.6 136 53.7
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 9.0e-26 120.6 135 47.4
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 1.5e-25 119.8 120 58.3
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.5e-25 119.8 134 53.0
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 1.5e-25 119.8 120 58.3
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 2.0e-25 119.4 137 51.8
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 2.6e-25 119.0 133 50.4
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 2.6e-25 119.0 106 58.5
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 2.6e-25 119.0 135 48.9
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 5.8e-25 117.9 139 51.8
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 7.6e-25 117.5 130 49.2
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 7.6e-25 117.5 142 48.6
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 1.0e-24 117.1 135 52.6
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 1.3e-24 116.7 146 50.0
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 1.7e-24 116.3 124 54.8
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 2.2e-24 115.9 160 48.1
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 2.2e-24 115.9 141 49.6
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 3.8e-24 115.2 113 57.5
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 3.8e-24 115.2 134 53.0
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 3.8e-24 115.2 132 48.5
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 4.9e-24 114.8 126 54.0
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 4.9e-24 114.8 133 54.1
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 4.9e-24 114.8 137 50.4
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 8.4e-24 114.0 140 48.6
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 1.1e-23 113.6 129 49.6
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.1e-23 113.6 137 54.0
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.1e-23 113.6 139 50.4
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 1.4e-23 113.2 121 52.9
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 1.4e-23 113.2 146 46.6
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 1.9e-23 112.8 133 50.4
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 3.2e-23 112.1 132 48.5
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 4.2e-23 111.7 140 48.6
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 5.5e-23 111.3 131 51.1
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 5.5e-23 111.3 111 55.0
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 7.1e-23 110.9 139 49.6
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 1.2e-22 110.2 139 49.6
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 1.6e-22 109.8 108 52.8
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 2.1e-22 109.4 127 50.4
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 2.1e-22 109.4 138 48.6
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 2.1e-22 109.4 115 55.7
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 2.1e-22 109.4 118 51.7
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 2.7e-22 109.0 118 53.4
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 3.5e-22 108.6 153 45.1
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 7.9e-22 107.5 123 52.0
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 1.0e-21 107.1 119 52.1
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 1.3e-21 106.7 145 46.2
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 1.3e-21 106.7 120 50.0
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 1.3e-21 106.7 145 44.8
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.8e-21 106.3 112 51.8
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 2.3e-21 105.9 155 44.5
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 3.0e-21 105.5 170 40.6
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 5.1e-21 104.8 170 40.6
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 6.7e-21 104.4 139 45.3
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 6.7e-21 104.4 122 49.2
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 8.7e-21 104.0 106 49.1
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 1.1e-20 103.6 136 50.0
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 3.3e-20 102.1 127 48.0
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 3.3e-20 102.1 145 43.4
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 5.7e-20 101.3 145 44.8
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 5.7e-20 101.3 138 46.4
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 9.7e-20 100.5 127 47.2
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 9.7e-20 100.5 142 45.1
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 9.7e-20 100.5 111 53.2
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 1.3e-19 100.1 139 44.6
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 1.6e-19 99.8 137 43.8
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 2.2e-19 99.4 131 48.9
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 2.8e-19 99.0 117 48.7
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 3.7e-19 98.6 120 50.8
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 4.8e-19 98.2 125 48.8
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 4.8e-19 98.2 138 46.4
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 6.3e-19 97.8 111 48.6
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 6.3e-19 97.8 132 46.2
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 8.2e-19 97.4 128 46.9
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 1.1e-18 97.1 106 52.8
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 1.4e-18 96.7 119 49.6
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 3.1e-18 95.5 133 45.1
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 9.0e-18 94.0 140 45.0
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 1.5e-17 93.2 86 58.1
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 5.9e-17 91.3 113 47.8
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 1.7e-16 89.7 115 46.1
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 6.5e-16 87.8 156 37.8
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.9e-15 86.3 147 40.1
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 1.9e-15 86.3 143 40.6
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 2.5e-15 85.9 151 38.4
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 9.4e-15 84.0 153 38.6
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 2.7e-14 82.4 156 38.5
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 3.6e-14 82.0 156 37.8
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 3.6e-14 82.0 156 37.8
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 7.9e-14 80.9 86 51.2
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 6.7e-13 77.8 84 47.6
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 7.4e-12 74.3 113 43.4
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 9.7e-12 73.9 142 38.7
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 3.7e-11 72.0 150 34.7
Peaxi162Scf00200g00182 Petunia axillaris HOM05D004757 ORTHO05D005743 4.8e-11 71.6 100 48.0
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 1.1e-10 70.5 61 55.7
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 2.4e-10 69.3 91 45.1
Peaxi162Scf00627g00011 Petunia axillaris HOM05D004757 ORTHO05D005743 4.1e-10 68.6 91 49.5
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 1.5e-09 66.6 100 48.0
AUR62033229 Chenopodium quinoa HOM05D004757 ORTHO05D005743 5.0e-08 61.6 84 46.4
AUR62021312 Chenopodium quinoa HOM05D004757 ORTHO05D005743 1.9e-07 59.7 88 43.2


User provided reference genes

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