Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00209 Erythranthe guttata HOM05D001389 ORTHO05D004821 3.7e-154 548.1 265 100.0
Migut.K00195 Erythranthe guttata HOM05D001389 ORTHO05D004821 4.2e-49 199.1 139 72.7
Migut.K00196 Erythranthe guttata HOM05D001389 ORTHO05D004821 6.6e-47 191.8 167 62.9
Migut.K00207 Erythranthe guttata HOM05D001389 ORTHO05D004821 1.1e-44 184.5 142 66.9
Migut.K00198 Erythranthe guttata HOM05D001389 ORTHO05D004821 6.4e-42 175.3 154 57.8
Migut.K00208 Erythranthe guttata HOM05D001389 ORTHO05D004821 7.9e-40 168.3 152 55.9
Migut.K00206 Erythranthe guttata HOM05D001389 ORTHO05D004821 5.5e-33 145.6 143 53.8
Oeu032952.2 Olea europaea HOM05D001389 ORTHO05D004821 1.2e-24 117.9 150 41.3
Psat3g083680 Pisum sativum HOM05D001389 ORTHO05D004821 3.9e-23 112.8 177 38.4
Ca_08330_v3 Cicer arietinum L. HOM05D001389 ORTHO05D004821 6.7e-23 112.1 188 38.3
TPR.G23692 Trifolium pratense HOM05D001389 ORTHO05D004821 6.7e-23 112.1 177 37.9
Cc06_g21200 Coffea canephora HOM05D001389 ORTHO05D004821 8.7e-23 111.7 150 40.7
Eucgr.A02174 Eucalyptus grandis HOM05D001389 ORTHO05D004821 1.1e-22 111.3 181 37.6
Nitab4.5_0003217g0010 Nicotiana tabacum HOM05D001389 ORTHO05D004821 1.1e-22 111.3 180 36.1
Nn7g37201 Nelumbo nucifera HOM05D001389 ORTHO05D004821 1.9e-22 110.5 148 41.9
QL07p015400 Quercus lobata HOM05D001389 ORTHO05D004821 2.5e-22 110.2 151 38.4
Potri.016G024500 Populus trichocarpa HOM05D001389 ORTHO05D004821 7.4e-22 108.6 152 38.2
arahy.Tifrunner.gnm1.ann1.ANJF9J Arachis hypogaea HOM05D001389 ORTHO05D004821 9.7e-22 108.2 153 39.9
Potri.006G026500 Populus trichocarpa HOM05D001389 ORTHO05D004821 9.7e-22 108.2 154 41.6
Lalb_Chr14g0365201 Lupinus albus HOM05D001389 ORTHO05D004821 1.3e-21 107.8 153 42.5
Ah.04g150090 Amaranthus hybridus HOM05D001389 ORTHO05D004821 2.2e-21 107.1 160 38.8
Ah.04g150320 Amaranthus hybridus HOM05D001389 ORTHO05D004821 2.2e-21 107.1 161 39.1
TWI53G1578 Tripterygium wilfordii HOM05D001389 ORTHO05D004821 2.2e-21 107.1 152 38.8
Medtr7g088035 Medicago truncatula HOM05D001389 ORTHO05D004821 2.8e-21 106.7 177 36.7
arahy.Tifrunner.gnm1.ann1.132YY9 Arachis hypogaea HOM05D001389 ORTHO05D004821 3.7e-21 106.3 152 39.5
Migut.K00191 Erythranthe guttata HOM05D001389 ORTHO05D004821 3.7e-21 106.3 151 37.7
Migut.K00193 Erythranthe guttata HOM05D001389 ORTHO05D004821 3.7e-21 106.3 151 37.7
Prupe.6G122000 Prunus persica HOM05D001389 ORTHO05D004821 3.7e-21 106.3 178 36.5
Glyma.19G122300 Glycine max HOM05D001389 ORTHO05D004821 4.8e-21 105.9 177 39.0
Manes.15G176200 Manihot esculenta HOM05D001389 ORTHO05D004821 4.8e-21 105.9 153 38.6
Manes.15G176224 Manihot esculenta HOM05D001389 ORTHO05D004821 4.8e-21 105.9 153 38.6
Manes.S095320 Manihot esculenta HOM05D001389 ORTHO05D004821 4.8e-21 105.9 153 38.6
Sed0009784 Sechium edule HOM05D001389 ORTHO05D004821 4.8e-21 105.9 178 35.4
MSTRG.26200 Avicennia marina HOM05D001389 ORTHO05D004821 6.3e-21 105.5 152 38.2
CiPaw.09G161600 Carya illinoinensis HOM05D001389 ORTHO05D004821 1.1e-20 104.8 155 37.4
Nitab4.5_0000613g0210 Nicotiana tabacum HOM05D001389 ORTHO05D004821 1.8e-20 104.0 180 33.9
Sabra06G0019600 Salix brachista HOM05D001389 ORTHO05D004821 1.8e-20 104.0 152 37.5
Ah.04g150300 Amaranthus hybridus HOM05D001389 ORTHO05D004821 3.1e-20 103.2 146 41.1
COL.COLO4_06029 Corchorus olitorius HOM05D001389 ORTHO05D004821 3.1e-20 103.2 149 38.9
Duzib106G0294 Durio zibethinus HOM05D001389 ORTHO05D004821 4.1e-20 102.8 162 37.7
Migut.K00210 Erythranthe guttata HOM05D001389 ORTHO05D004821 4.1e-20 102.8 169 38.5
PGR042G3174 Punica granatum HOM05D001389 ORTHO05D004821 4.1e-20 102.8 180 35.6
Thecc.10G138200 Theobroma cacao HOM05D001389 ORTHO05D004821 5.3e-20 102.4 149 38.9
Ciclev10012209m.g Citrus clementina HOM05D001389 ORTHO05D004821 6.9e-20 102.1 156 37.2
SalBow1G2623 Salvia bowleyana HOM05D001389 ORTHO05D004821 1.2e-19 101.3 143 41.3
Cfa019903 Carpinus fangiana HOM05D001389 ORTHO05D004821 1.5e-19 100.9 123 42.3
THA.LOC104826893 Tarenaya hassleriana HOM05D001389 ORTHO05D004821 2.0e-19 100.5 156 36.5
Phvul.001G101400 Phaseolus vulgaris HOM05D001389 ORTHO05D004821 2.6e-19 100.1 199 33.2
SGA_v2.0_scaffold123G33491 Striga asiatica HOM05D001389 ORTHO05D004821 2.6e-19 100.1 145 38.6
ClCG04G005030 Citrullus lanatus HOM05D001389 ORTHO05D004821 3.4e-19 99.8 153 36.6
Haze_20348 Corylus avellana HOM05D001389 ORTHO05D004821 3.4e-19 99.8 143 39.9
Gohir.D06G183700 Gossypium hirsutum HOM05D001389 ORTHO05D004821 3.4e-19 99.8 150 38.0
Gorai.010G214900 Gossypium raimondii HOM05D001389 ORTHO05D004821 3.4e-19 99.8 150 38.0
PSO675G3833 Papaver somniferum HOM05D001389 ORTHO05D004821 3.4e-19 99.8 148 37.8
Carub.0006s0315 Capsella rubella HOM05D001389 ORTHO05D004821 4.5e-19 99.4 160 35.6
CsaV3_4G028990 Cucumis sativus L. HOM05D001389 ORTHO05D004821 4.5e-19 99.4 179 32.4
MELO3C019168.2 Cucumis melo HOM05D001389 ORTHO05D004821 5.9e-19 99.0 179 32.4
DCAR_013519 Daucus carota HOM05D001389 ORTHO05D004821 5.9e-19 99.0 150 36.0
MBI13_g29623_MAGBIO Magnolia biondii HOM05D001389 ORTHO05D004821 5.9e-19 99.0 151 38.4
Cpa.g.sc33.175 Carica papaya HOM05D001389 ORTHO05D004821 7.7e-19 98.6 156 37.2
Lj1g0008220 Lotus japonicus HOM05D001389 ORTHO05D004821 7.7e-19 98.6 182 36.3
BcaB05g21769 Brassica carinata HOM05D001389 ORTHO05D004821 1.0e-18 98.2 157 35.7
FAN25G1026 Fragaria x ananassa HOM05D001389 ORTHO05D004821 1.0e-18 98.2 155 35.5
vmacro08820 Vaccinium macrocarpon HOM05D001389 ORTHO05D004821 1.0e-18 98.2 159 35.8
FvH4_3g29720 Fragaria vesca HOM05D001389 ORTHO05D004821 1.3e-18 97.8 155 35.5
FAN11G1135 Fragaria x ananassa HOM05D001389 ORTHO05D004821 1.3e-18 97.8 155 35.5
Gohir.D06G183733 Gossypium hirsutum HOM05D001389 ORTHO05D004821 1.7e-18 97.4 170 34.7
vmacro08821 Vaccinium macrocarpon HOM05D001389 ORTHO05D004821 1.7e-18 97.4 159 35.8
Atru.chr10.823 Acer truncatum HOM05D001389 ORTHO05D004821 2.2e-18 97.1 155 36.8
AL6G13820 Arabidopsis lyrata HOM05D001389 ORTHO05D004821 2.2e-18 97.1 160 35.0
Lj1g0026160 Lotus japonicus HOM05D001389 ORTHO05D004821 2.2e-18 97.1 182 36.3
C02p01840 Brassica napus HOM05D001389 ORTHO05D004821 2.9e-18 96.7 158 33.5
CARHR209060 Cardamine hirsuta HOM05D001389 ORTHO05D004821 2.9e-18 96.7 160 35.0
TAR623G1069 Trochodendron aralioides HOM05D001389 ORTHO05D004821 2.9e-18 96.7 149 38.3
Actinidia29415 Actinidia chinensis HOM05D001389 ORTHO05D004821 3.8e-18 96.3 166 34.3
Thecc.10G138400 Theobroma cacao HOM05D001389 ORTHO05D004821 3.8e-18 96.3 144 37.5
AT5G04200 Arabidopsis thaliana HOM05D001389 ORTHO05D004821 5.0e-18 95.9 159 34.6
FAN21G3122 Fragaria x ananassa HOM05D001389 ORTHO05D004821 5.0e-18 95.9 150 36.0
RcHm_v2.0_Chr5g0055101 Rosa chinensis HOM05D001389 ORTHO05D004821 5.0e-18 95.9 164 34.1
Atru.chr10.812 Acer truncatum HOM05D001389 ORTHO05D004821 6.5e-18 95.5 155 36.1
COL.COLO4_06030 Corchorus olitorius HOM05D001389 ORTHO05D004821 6.5e-18 95.5 152 34.9
Sp6g38550 Schrenkiella parvula HOM05D001389 ORTHO05D004821 6.5e-18 95.5 161 34.2
Aa31LG1G21150 Aethionema arabicum HOM05D001389 ORTHO05D004821 8.5e-18 95.1 158 35.4
BraA02t04804Z Brassica rapa HOM05D001389 ORTHO05D004821 8.5e-18 95.1 158 33.5
CANSAT64G2247 Cannabis sativa HOM05D001389 ORTHO05D004821 8.5e-18 95.1 195 31.3
Dinv37305 Davidia involucrata HOM05D001389 ORTHO05D004821 8.5e-18 95.1 142 38.0
Gorai.010G215000 Gossypium raimondii HOM05D001389 ORTHO05D004821 8.5e-18 95.1 170 34.1
Atru.chr10.690 Acer truncatum HOM05D001389 ORTHO05D004821 1.4e-17 94.4 165 36.4
Lj4A828T49 Lonicera japonica HOM05D001389 ORTHO05D004821 1.4e-17 94.4 169 36.7
AUR62043201 Chenopodium quinoa HOM05D001389 ORTHO05D004821 1.9e-17 94.0 177 35.0
VMungo1383G2405 Vigna mungo HOM05D001389 ORTHO05D004821 1.9e-17 94.0 175 34.9
BcaC03g12951 Brassica carinata HOM05D001389 ORTHO05D004821 3.2e-17 93.2 158 32.9
BolC2t06141H Brassica oleracea HOM05D001389 ORTHO05D004821 3.2e-17 93.2 158 32.9
CAN.G128.126 Capsicum annuum HOM05D001389 ORTHO05D004821 3.2e-17 93.2 156 36.5
HanXRQChr06g0182201 Helianthus annuus HOM05D001389 ORTHO05D004821 4.2e-17 92.8 175 34.9
Peaxi162Scf00698g00416 Petunia axillaris HOM05D001389 ORTHO05D004821 4.2e-17 92.8 149 36.2
GSVIVG01025829001 Vitis vinifera HOM05D001389 ORTHO05D004821 4.2e-17 92.8 174 33.9
A10p31940 Brassica napus HOM05D001389 ORTHO05D004821 7.2e-17 92.0 157 35.0
BcaC06g32124 Brassica carinata HOM05D001389 ORTHO05D004821 9.4e-17 91.7 156 34.6
BraA10t45238Z Brassica rapa HOM05D001389 ORTHO05D004821 9.4e-17 91.7 158 34.8
Thhalv10014106m.g Eutrema salsugineum HOM05D001389 ORTHO05D004821 9.4e-17 91.7 162 33.3
AUR62020974 Chenopodium quinoa HOM05D001389 ORTHO05D004821 1.2e-16 91.3 160 35.0
Lsat_1_v5_gn_8_101661 Lactuca sativa HOM05D001389 ORTHO05D004821 1.2e-16 91.3 160 36.9
Sopen10g031800 Solanum pennellii HOM05D001389 ORTHO05D004821 1.2e-16 91.3 187 30.5
Solyc10g081300.1 Solanum lycopersicum HOM05D001389 ORTHO05D004821 1.6e-16 90.9 187 30.5
EL10Ac3g07371 Beta vulgaris HOM05D001389 ORTHO05D004821 2.7e-16 90.1 157 35.7
Dinv40579 Davidia involucrata HOM05D001389 ORTHO05D004821 2.7e-16 90.1 143 37.1
HanXRQChr11g0331721 Helianthus annuus HOM05D001389 ORTHO05D004821 3.6e-16 89.7 152 34.2
Hund24487 Selenicereus undatus HOM05D001389 ORTHO05D004821 3.6e-16 89.7 176 35.2
Aqoxy6G00755 Aquilegia oxysepala HOM05D001389 ORTHO05D004821 4.6e-16 89.4 173 32.9
Rhsim04G0135200 Rhododendron simsii HOM05D001389 ORTHO05D004821 4.6e-16 89.4 153 35.9
BolC9t60005H Brassica oleracea HOM05D001389 ORTHO05D004821 7.9e-16 88.6 157 34.4
Cc03_g10140 Coffea canephora HOM05D001389 ORTHO05D004821 7.9e-16 88.6 154 37.0
AUR62043198 Chenopodium quinoa HOM05D001389 ORTHO05D004821 1.4e-15 87.8 160 33.8
ECA236G3306 Erigeron canadensis HOM05D001389 ORTHO05D004821 1.4e-15 87.8 152 34.2
SGA_v2.0_scaffold123G33484 Striga asiatica HOM05D001389 ORTHO05D004821 3.0e-15 86.7 145 36.6
PGSC0003DMG400028207 Solanum tuberosum HOM05D001389 ORTHO05D004821 5.1e-15 85.9 164 31.1
EL10Ac3g07374 Beta vulgaris HOM05D001389 ORTHO05D004821 8.8e-15 85.1 162 34.6
HPP92_011317 Vanilla planifolia HOM05D001389 ORTHO05D004821 8.8e-15 85.1 153 34.6
Zm00001eb196150 Zea mays HOM05D001389 ORTHO05D004821 1.7e-13 80.9 163 33.7
ATR1096G156 Amborella trichopoda HOM05D001389 ORTHO05D004821 3.7e-13 79.7 150 33.3
Sc13g0000720 Simmondsia chinensis HOM05D001389 ORTHO05D004821 4.8e-13 79.3 168 31.0
Sc19g0007800 Simmondsia chinensis HOM05D001389 ORTHO05D004821 6.3e-13 79.0 129 32.6
VMungo1215G0210 Vigna mungo HOM05D000908 ORTHO05D000789 6.3e-13 79.0 122 36.9
Os11g0134700 Oryza sativa ssp. japonica HOM05D001389 ORTHO05D004821 2.4e-12 77.0 162 31.5
Gohir.A06G173700 Gossypium hirsutum HOM05D001389 ORTHO05D004821 4.1e-12 76.3 114 38.6
Ah.13g077460 Amaranthus hybridus HOM05D001389 ORTHO05D004821 6.9e-12 75.5 148 31.8
Gorai.010G213400 Gossypium raimondii HOM05D001389 ORTHO05D004821 9.1e-12 75.1 161 29.8
Gorai.010G213000 Gossypium raimondii HOM05D001389 ORTHO05D047432 2.0e-11 73.9 159 34.6
Gohir.D06G181600 Gossypium hirsutum HOM05D001389 ORTHO05D047432 2.6e-11 73.6 159 34.6
Nn6g34141 Nelumbo nucifera HOM05D001389 ORTHO05D004821 3.4e-11 73.2 107 37.4
Gohir.D06G182200 Gossypium hirsutum HOM05D001389 ORTHO05D004821 7.7e-11 72.0 161 29.2
Gohir.D06G182000 Gossypium hirsutum HOM05D001389 ORTHO05D004821 1.0e-10 71.6 161 29.2
Gohir.A06G172806 Gossypium hirsutum HOM05D001389 ORTHO05D004821 1.3e-10 71.2 155 31.6
Gohir.D06G182333 Gossypium hirsutum HOM05D001389 ORTHO05D004821 8.5e-10 68.6 144 30.6
Nn5g26938 Nelumbo nucifera HOM05D001389 ORTHO05D004821 1.4e-09 67.8 95 40.0
Aa31LG4G1700 Aethionema arabicum HOM05D001389 ORTHO05D002892 5.5e-09 65.9 147 31.3
MBI13_g44209_MAGBIO Magnolia biondii HOM05D001389 ORTHO05D004821 7.2e-09 65.5 146 34.2
SEGI_00410 Sequoiadendron giganteum HOM05D001389 ORTHO05D002892 7.2e-09 65.5 144 32.6
SEGI_38757 Sequoiadendron giganteum HOM05D001389 ORTHO05D004821 2.1e-08 63.9 189 29.1
Migut.K00194 Erythranthe guttata HOM05D002167 ORTHO05D002342 6.1e-08 62.4 52 65.4
Gohir.D06G182450 Gossypium hirsutum HOM05D001389 ORTHO05D004821 1.0e-07 61.6 134 30.6
MBI13_g31584_MAGBIO Magnolia biondii HOM05D001389 ORTHO05D004821 1.0e-07 61.6 89 36.0
SEGI_15007 Sequoiadendron giganteum HOM05D001389 ORTHO05D004821 1.0e-07 61.6 182 27.5
Gohir.A06G172802 Gossypium hirsutum HOM05D001389 ORTHO05D004821 2.3e-07 60.5 161 27.3
Gorai.010G213700 Gossypium raimondii HOM05D001389 ORTHO05D004821 3.0e-07 60.1 134 29.9
vmacro09082 Vaccinium macrocarpon HOM05D002167 ORTHO05D002342 3.9e-07 59.7 88 40.9
BcaC04g22739 Brassica carinata HOM05D001389 ORTHO05D002892 5.1e-07 59.3 161 29.8
BolC9t54488H Brassica oleracea HOM05D001389 ORTHO05D002892 5.1e-07 59.3 161 29.8
Gohir.D06G182150 Gossypium hirsutum HOM05D001389 ORTHO05D004821 5.1e-07 59.3 141 29.1
Gorai.010G213600 Gossypium raimondii HOM05D001389 ORTHO05D004821 5.1e-07 59.3 141 29.1
Sp2g01670 Schrenkiella parvula HOM05D001389 ORTHO05D002892 5.1e-07 59.3 162 30.2
A09p13260 Brassica napus HOM05D001389 ORTHO05D002892 6.7e-07 58.9 167 28.7
BraA09t36974Z Brassica rapa HOM05D001389 ORTHO05D002892 6.7e-07 58.9 167 28.7
C09p15760 Brassica napus HOM05D001389 ORTHO05D002892 8.8e-07 58.5 162 29.6
Gohir.D06G182366 Gossypium hirsutum HOM05D001389 ORTHO05D004821 3.3e-06 56.6 159 27.0


User provided reference genes

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