Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.5e-104 382.9 192 100.0
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.4e-102 376.3 192 98.4
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 8.1e-79 297.4 192 73.4
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 1.4e-78 296.6 192 74.5
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 3.2e-75 285.4 192 71.4
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 3.1e-70 268.9 194 67.5
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 2.1e-66 256.1 193 65.3
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 1.3e-65 253.4 196 63.3
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 1.8e-65 253.1 196 62.8
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 8.7e-65 250.8 192 64.6
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 1.5e-64 250.0 192 62.5
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.3e-63 246.9 192 62.0
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 3.7e-63 245.4 194 62.9
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 8.2e-63 244.2 199 61.8
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 2.4e-62 242.7 194 63.4
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 2.4e-62 242.7 196 60.7
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 4.1e-62 241.9 199 60.3
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 1.2e-61 240.4 194 61.3
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 1.5e-61 240.0 194 62.4
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 1.5e-61 240.0 196 61.7
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 7.6e-61 237.7 192 60.4
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 7.6e-61 237.7 193 63.7
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 2.5e-59 232.6 196 57.7
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.5e-59 232.6 194 60.8
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 3.2e-59 232.3 194 60.8
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 5.5e-59 231.5 193 59.1
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 9.4e-59 230.7 197 60.4
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 1.2e-58 230.3 194 60.3
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.2e-58 230.3 193 59.6
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.6e-58 229.9 192 61.5
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 4.6e-58 228.4 195 60.5
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 6.1e-58 228.0 195 60.5
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 7.9e-58 227.6 193 61.1
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.0e-57 227.3 207 56.5
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 2.3e-57 226.1 193 59.6
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 2.3e-57 226.1 193 57.5
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 3.0e-57 225.7 194 57.7
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 3.0e-57 225.7 191 59.2
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 3.0e-57 225.7 219 55.3
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 3.9e-57 225.3 198 58.1
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 5.1e-57 224.9 192 58.3
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 5.1e-57 224.9 195 57.9
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 5.1e-57 224.9 195 56.9
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 5.1e-57 224.9 192 59.9
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 1.1e-56 223.8 192 59.4
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 1.1e-56 223.8 194 58.2
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.1e-56 223.8 196 57.1
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 1.9e-56 223.0 197 58.4
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.9e-56 223.0 193 59.1
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.9e-56 223.0 195 59.5
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 2.5e-56 222.6 195 59.0
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 4.3e-56 221.9 199 58.8
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 5.7e-56 221.5 192 57.3
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 7.4e-56 221.1 193 58.5
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 2.2e-55 219.5 195 59.0
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 2.2e-55 219.5 193 58.0
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 3.7e-55 218.8 193 57.5
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 6.3e-55 218.0 196 57.1
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 6.3e-55 218.0 195 58.5
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.1e-54 217.2 194 56.7
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.8e-54 216.5 193 58.0
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 1.8e-54 216.5 192 59.4
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 3.1e-54 215.7 193 59.1
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 3.1e-54 215.7 195 55.9
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 4.1e-54 215.3 194 55.7
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 4.1e-54 215.3 192 57.3
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 6.9e-54 214.5 193 57.0
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 1.2e-53 213.8 193 56.0
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 2.6e-53 212.6 197 56.3
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 2.6e-53 212.6 192 55.7
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 2.6e-53 212.6 201 56.2
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 4.5e-53 211.8 200 54.5
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 4.5e-53 211.8 200 54.5
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 4.5e-53 211.8 193 57.5
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 5.9e-53 211.5 197 56.3
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 5.9e-53 211.5 197 56.3
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 5.0e-52 208.4 194 56.7
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.9e-51 206.5 192 54.7
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 9.4e-51 204.1 252 48.0
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 4.7e-50 201.8 192 54.7
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 7.9e-50 201.1 185 58.9
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 1.0e-49 200.7 193 55.4
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 5.1e-49 198.4 133 70.7
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 5.1e-49 198.4 194 51.5
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 1.1e-48 197.2 149 63.1
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 1.5e-48 196.8 225 49.3
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 2.6e-48 196.1 197 51.8
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 4.4e-48 195.3 194 53.1
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 2.4e-46 189.5 147 60.5
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.7e-44 183.3 164 57.3
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 4.7e-42 175.3 108 73.1
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.0e-41 174.1 110 70.9
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 5.2e-41 171.8 200 45.0
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 1.7e-39 166.8 134 56.0
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 2.8e-39 166.0 113 67.3
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.8e-39 165.2 109 65.1
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.9e-36 156.0 108 63.9
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 3.3e-32 142.5 127 56.7
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 2.8e-31 139.4 90 68.9
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 4.8e-31 138.7 107 61.7
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 2.0e-29 133.3 142 47.2
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 2.5e-27 126.3 125 51.2
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 1.2e-21 107.5 76 64.5
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 1.6e-21 107.1 85 64.7
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 2.7e-21 106.3 86 60.5
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 5.0e-20 102.1 143 38.5
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 1.6e-18 97.1 72 63.9
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 6.8e-17 91.7 175 33.1
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 1.2e-16 90.9 68 63.2
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 1.2e-16 90.9 68 63.2
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 3.4e-16 89.4 68 64.7
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 5.9e-13 78.6 120 39.2
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.5e-11 73.9 58 62.1
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 5.6e-11 72.0 95 46.3
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 3.6e-10 69.3 85 44.7
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 8.0e-10 68.2 84 53.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 9.8e-08 61.2 55 60.0
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 9.8e-08 61.2 55 60.0


User provided reference genes

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