Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 8.5e-99 364.0 230 100.0
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 3.3e-50 202.6 236 55.9
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 3.6e-49 199.1 230 53.9
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 1.8e-48 196.8 250 51.2
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 5.4e-37 158.7 224 54.5
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 4.2e-29 132.5 207 49.3
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 4.3e-26 122.5 228 42.5
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 9.6e-26 121.3 223 39.9
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 2.8e-25 119.8 242 43.4
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 8.1e-25 118.2 229 39.7
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 1.5e-23 114.0 227 42.7
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.5e-23 114.0 222 39.6
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 2.0e-23 113.6 247 39.7
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 7.6e-23 111.7 236 40.3
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 3.5e-20 102.8 236 41.1
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 6.0e-20 102.1 230 37.4
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.3e-19 100.9 208 37.0
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.0e-19 99.8 157 42.0
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 3.0e-19 99.8 169 43.2
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.9e-19 99.4 177 37.3
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 6.6e-19 98.6 196 48.0
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 6.6e-19 98.6 180 39.4
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 6.6e-19 98.6 229 38.0
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.9e-18 97.1 249 39.0
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.9e-18 97.1 287 36.6
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 5.6e-18 95.5 227 38.3
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.3e-17 94.4 238 50.0
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.6e-17 94.0 287 32.8
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 2.1e-17 93.6 263 35.4
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 2.1e-17 93.6 142 45.8
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 4.8e-17 92.4 235 35.3
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 1.1e-16 91.3 144 41.7
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 3.1e-16 89.7 218 33.5
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 3.1e-16 89.7 239 35.6
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 6.9e-16 88.6 70 62.9
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 9.0e-16 88.2 158 36.7
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 1.5e-15 87.4 259 39.4
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.0e-15 87.0 237 32.9
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 2.0e-15 87.0 203 37.4
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 2.6e-15 86.7 197 40.6
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.6e-15 86.7 60 70.0
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 4.5e-15 85.9 237 32.9
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 9.9e-15 84.7 274 31.8
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.3e-14 84.3 175 33.7
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.3e-14 84.3 264 33.3
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.3e-14 84.3 220 37.3
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 2.2e-14 83.6 141 43.3
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.9e-14 83.2 63 68.3
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.9e-14 83.2 63 68.3
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 3.8e-14 82.8 244 32.8
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 4.9e-14 82.4 236 33.1
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 6.4e-14 82.0 227 34.4
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 8.4e-14 81.6 69 62.3
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 8.4e-14 81.6 61 67.2
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.4e-13 80.9 69 62.3
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.4e-13 80.1 69 60.9
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 3.2e-13 79.7 68 58.8
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 3.2e-13 79.7 248 33.9
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 7.1e-13 78.6 59 64.4
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 7.1e-13 78.6 227 33.9
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 2.1e-12 77.0 58 67.2
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 2.7e-12 76.6 252 32.1
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.5e-12 76.3 221 32.6
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 6.0e-12 75.5 56 66.1
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.3e-11 74.3 238 39.9
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 1.8e-11 73.9 229 34.5
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.8e-11 73.9 78 48.7
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 3.0e-11 73.2 202 38.1
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 3.9e-11 72.8 262 31.3
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 5.1e-11 72.4 58 60.3
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 6.7e-11 72.0 199 39.7
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 1.5e-10 70.9 229 31.9
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 1.5e-10 70.9 222 30.2
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.3e-10 69.7 58 56.9
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.3e-10 69.7 58 56.9
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 3.3e-10 69.7 223 31.4
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 4.3e-10 69.3 219 33.3
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 5.6e-10 68.9 227 33.9
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 5.6e-10 68.9 276 29.7
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.1e-09 67.0 215 34.4
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 4.8e-09 65.9 318 27.0
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 2.4e-08 63.5 219 29.7
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 2.4e-08 63.5 219 29.7
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 3.1e-08 63.2 221 33.5
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 5.3e-08 62.4 220 30.0
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 6.9e-08 62.0 60 58.3
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 1.2e-07 61.2 219 29.2
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 2.0e-07 60.5 222 30.2
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 5.8e-07 58.9 224 30.8
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 1.7e-06 57.4 233 30.5
AagrBONN_evm.TU.Sc2ySwM_228.5650 Anthoceros agrestis HOM05D017655 ORTHO05D008750 6.4e-06 55.5 56 46.4
Peaxi162Scf00354g00210 Petunia axillaris HOM05D015445 ORTHO05D008750 6.4e-06 55.5 206 37.4


User provided reference genes

Program Settings