Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00083 Erythranthe guttata HOM05D002914 ORTHO05D003196 1.0e-40 169.9 98 100.0
Dinv18053 Davidia involucrata HOM05D002914 ORTHO05D003196 5.0e-24 114.4 99 65.7
TAR623G0040 Trochodendron aralioides HOM05D002914 ORTHO05D003196 2.0e-20 102.4 95 64.2
Hma1.2p1_1847F.1_g305210 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 1.7e-19 99.4 85 74.1
CSS0032433 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 2.2e-19 99.0 87 65.5
Thecc.05G158000 Theobroma cacao HOM05D002914 ORTHO05D003196 2.2e-19 99.0 81 65.4
Gohir.A09G123100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.7e-19 98.2 78 66.7
Gorai.006G137500 Gossypium raimondii HOM05D002914 ORTHO05D003196 3.7e-19 98.2 78 66.7
Aqoxy2G00187 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 4.8e-19 97.8 99 57.6
Manes.09G023600 Manihot esculenta HOM05D002914 ORTHO05D003196 8.2e-19 97.1 75 66.7
Gohir.D09G120100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.1e-18 96.7 78 65.4
Nitab4.5_0005892g0010 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.4e-18 96.3 85 63.5
CiPaw.09G037100 Carya illinoinensis HOM05D002914 ORTHO05D003196 1.8e-18 95.9 74 70.3
COL.COLO4_28237 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.8e-18 95.9 80 63.8
Atru.chr1.1072 Acer truncatum HOM05D002914 ORTHO05D003196 4.1e-18 94.7 66 77.3
Duzib093G1261 Durio zibethinus HOM05D002914 ORTHO05D003196 9.1e-18 93.6 75 64.0
Sc13g0001830 Simmondsia chinensis HOM05D002914 ORTHO05D003196 3.5e-17 91.7 88 62.5
Oeu000823.1 Olea europaea HOM05D002914 ORTHO05D003196 4.5e-17 91.3 93 58.1
SGA_v2.0_scaffold105G30420 Striga asiatica HOM05D002914 ORTHO05D003196 4.5e-17 91.3 98 59.2
Nn2g15303 Nelumbo nucifera HOM05D002914 ORTHO05D003196 1.0e-16 90.1 78 59.0
Nn7g36239 Nelumbo nucifera HOM05D002914 ORTHO05D003196 1.0e-16 90.1 72 68.1
Ciclev10006230m.g Citrus clementina HOM05D002914 ORTHO05D003196 1.7e-16 89.4 90 57.8
Peaxi162Scf00493g00035 Petunia axillaris HOM05D002914 ORTHO05D003196 2.2e-16 89.0 83 63.9
Sp5g05100 Schrenkiella parvula HOM05D002914 ORTHO05D003196 2.2e-16 89.0 74 63.5
Prupe.7G063700 Prunus persica HOM05D002914 ORTHO05D003196 2.9e-16 88.6 79 62.0
Lsat_1_v5_gn_9_28661 Lactuca sativa HOM05D002914 ORTHO05D003196 3.8e-16 88.2 86 58.1
Phvul.001G135000 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 3.8e-16 88.2 79 60.8
Potri.006G052500 Populus trichocarpa HOM05D002914 ORTHO05D003196 3.8e-16 88.2 81 60.5
RcHm_v2.0_Chr3g0481701 Rosa chinensis HOM05D002914 ORTHO05D003196 3.8e-16 88.2 92 63.0
Solyc04g015540.1 Solanum lycopersicum HOM05D002914 ORTHO05D003196 3.8e-16 88.2 74 60.8
Duzib128G0409 Durio zibethinus HOM05D002914 ORTHO05D003196 5.0e-16 87.8 75 60.0
Lsat_1_v5_gn_5_161660 Lactuca sativa HOM05D002914 ORTHO05D003196 5.0e-16 87.8 64 67.2
Glyma.19G140500 Glycine max HOM05D002914 ORTHO05D003196 6.5e-16 87.4 63 68.3
VMungo1383G1568 Vigna mungo HOM05D002914 ORTHO05D003196 6.5e-16 87.4 73 63.0
Carub.0005s2434 Capsella rubella HOM05D002914 ORTHO05D003196 8.5e-16 87.0 70 68.6
Cfa016832 Carpinus fangiana HOM05D002914 ORTHO05D003196 8.5e-16 87.0 76 63.2
Ca_08467_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 1.1e-15 86.7 80 56.2
MD14G1070500 Malus domestica HOM05D002914 ORTHO05D003196 1.5e-15 86.3 80 62.5
Sopen04g007610 Solanum pennellii HOM05D002914 ORTHO05D003196 1.5e-15 86.3 68 64.7
TWI74G1608 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 1.5e-15 86.3 59 74.6
A09p50360 Brassica napus HOM05D002914 ORTHO05D003196 1.9e-15 85.9 68 69.1
C08p33030 Brassica napus HOM05D002914 ORTHO05D003196 1.9e-15 85.9 68 69.1
BolC8t50903H Brassica oleracea HOM05D002914 ORTHO05D003196 1.9e-15 85.9 68 69.1
BraA09t40488Z Brassica rapa HOM05D002914 ORTHO05D003196 1.9e-15 85.9 68 69.1
CANSAT80G1635 Cannabis sativa HOM05D002914 ORTHO05D003196 1.9e-15 85.9 56 76.8
Medtr7g091830 Medicago truncatula HOM05D002914 ORTHO05D003196 3.2e-15 85.1 67 67.2
QL07p000101 Quercus lobata HOM05D002914 ORTHO05D003196 4.2e-15 84.7 71 67.6
PGSC0003DMG400027270 Solanum tuberosum HOM05D002914 ORTHO05D003196 4.2e-15 84.7 69 62.3
Thhalv10006376m.g Eutrema salsugineum HOM05D002914 ORTHO05D003196 5.5e-15 84.3 68 67.6
AL5G39080 Arabidopsis lyrata HOM05D002914 ORTHO05D003196 7.2e-15 84.0 87 56.3
CARHR167710 Cardamine hirsuta HOM05D002914 ORTHO05D003196 7.2e-15 84.0 65 67.7
Lj1g0015891 Lotus japonicus HOM05D002914 ORTHO05D003196 7.2e-15 84.0 77 58.4
BcaB02g08314 Brassica carinata HOM05D002914 ORTHO05D003196 9.4e-15 83.6 68 67.6
A04p03090 Brassica napus HOM05D002914 ORTHO05D003196 9.4e-15 83.6 68 67.6
BraA04t16032Z Brassica rapa HOM05D002914 ORTHO05D003196 9.4e-15 83.6 68 67.6
TPR.G27766 Trifolium pratense HOM05D002914 ORTHO05D003196 1.2e-14 83.2 67 65.7
BcaC07g40375 Brassica carinata HOM05D002914 ORTHO05D003196 1.6e-14 82.8 67 65.7
Ah.04g151670 Amaranthus hybridus HOM05D002914 ORTHO05D003196 2.1e-14 82.4 82 57.3
AT3G57500 Arabidopsis thaliana HOM05D002914 ORTHO05D003196 2.1e-14 82.4 72 63.9
BcaB02g07599 Brassica carinata HOM05D002914 ORTHO05D003196 2.1e-14 82.4 77 62.3
ClCG04G003270 Citrullus lanatus HOM05D002914 ORTHO05D003196 2.1e-14 82.4 73 63.0
EL10Ac3g07073 Beta vulgaris HOM05D002914 ORTHO05D003196 3.6e-14 81.6 82 56.1
Cpa.g.sc92.38 Carica papaya HOM05D002914 ORTHO05D003196 3.6e-14 81.6 65 67.7
Lalb_Chr20g0110761 Lupinus albus HOM05D002914 ORTHO05D003196 4.7e-14 81.3 72 62.5
HanXRQChr10g0300121 Helianthus annuus HOM05D002914 ORTHO05D003196 6.1e-14 80.9 85 60.0
Manes.08G049900 Manihot esculenta HOM05D002914 ORTHO05D003196 6.1e-14 80.9 58 72.4
BcaC08g44849 Brassica carinata HOM05D002914 ORTHO05D003196 1.0e-13 80.1 73 61.6
Psat3g072240 Pisum sativum HOM05D002914 ORTHO05D003196 1.8e-13 79.3 56 69.6
FAN09G0984 Fragaria x ananassa HOM05D002914 ORTHO05D003196 4.0e-13 78.2 98 49.0
FvH4_6g23590 Fragaria vesca HOM05D002914 ORTHO05D003196 5.2e-13 77.8 98 49.0
Gohir.A01G132111 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.2e-12 76.6 61 63.9
Os03g0696150 Oryza sativa ssp. japonica HOM05D002914 ORTHO05D003196 1.2e-12 76.6 79 48.1
Gorai.002G147700 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.5e-12 76.3 61 63.9
BcaC02g09941 Brassica carinata HOM05D002914 ORTHO05D003196 2.0e-12 75.9 68 63.2
A07p23450 Brassica napus HOM05D002914 ORTHO05D003196 2.0e-12 75.9 73 60.3
C04p34950 Brassica napus HOM05D002914 ORTHO05D003196 2.0e-12 75.9 88 52.3
BolC4t25049H Brassica oleracea HOM05D002914 ORTHO05D003196 2.0e-12 75.9 88 52.3
ATR0332G006 Amborella trichopoda HOM05D002914 ORTHO05D003196 3.4e-12 75.1 62 61.3
Gohir.D01G121050 Gossypium hirsutum HOM05D002914 ORTHO05D003196 5.7e-12 74.3 61 62.3
THA.LOC104802149 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 1.7e-11 72.8 75 56.0
CsaV3_4G011800 Cucumis sativus L. HOM05D002914 ORTHO05D003196 8.3e-11 70.5 69 53.6
MELO3C023115.2 Cucumis melo HOM05D002914 ORTHO05D003196 1.1e-10 70.1 63 55.6
ECA247G2219 Erigeron canadensis HOM05D000031 ORTHO05D000003 9.1e-10 67.0 104 42.3
Aqoxy5G01394 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 1.6e-09 66.2 83 47.0
Sabra06G0036900 Salix brachista HOM05D002914 ORTHO05D003196 2.0e-09 65.9 60 61.7
Atru.chr5.2809 Acer truncatum HOM05D002914 ORTHO05D003196 4.5e-09 64.7 76 51.3
Dinv42126 Davidia involucrata HOM05D002914 ORTHO05D003196 4.5e-09 64.7 92 43.5
MBI02_g05666_MAGBIO Magnolia biondii HOM05D002914 ORTHO05D003196 4.5e-09 64.7 74 55.4
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 5.9e-09 64.3 89 44.9
Atru.ctg24.30 Acer truncatum HOM05D002914 ORTHO05D003196 1.0e-08 63.5 44 72.7
Lalb_Chr16g0384551 Lupinus albus HOM05D002914 ORTHO05D003196 2.9e-08 62.0 82 42.7
DCAR_020485 Daucus carota HOM05D002914 ORTHO05D003196 3.8e-08 61.6 95 43.2
Migut.J01766 Erythranthe guttata HOM05D002914 ORTHO05D003196 6.5e-08 60.8 85 45.9
Actinidia17240 Actinidia chinensis HOM05D002914 ORTHO05D003196 8.5e-08 60.5 102 43.1
MELO3C028578.2 Cucumis melo HOM05D002914 ORTHO05D003196 8.5e-08 60.5 63 49.2
CsaV3_7G008810 Cucumis sativus L. HOM05D002914 ORTHO05D003196 8.5e-08 60.5 63 49.2
SEGI_00607 Sequoiadendron giganteum HOM05D002914 ORTHO05D003196 8.5e-08 60.5 51 58.8
ATR0225G004 Amborella trichopoda HOM05D002914 ORTHO05D003196 1.1e-07 60.1 64 48.4
arahy.Tifrunner.gnm1.ann1.TRJ4SS Arachis hypogaea HOM05D002914 ORTHO05D003196 1.1e-07 60.1 38 73.7
AUR62024432 Chenopodium quinoa HOM05D002914 ORTHO05D003196 1.9e-07 59.3 78 52.6
TWI31G1086 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 1.9e-07 59.3 61 50.8
ClCG02G005720 Citrullus lanatus HOM05D002914 ORTHO05D003196 2.5e-07 58.9 93 39.8
RcHm_v2.0_Chr6g0259071 Rosa chinensis HOM05D002914 ORTHO05D003196 2.5e-07 58.9 62 48.4
Duzib052G1256 Durio zibethinus HOM05D002914 ORTHO05D003196 4.2e-07 58.2 65 49.2
Duzib248G0090 Durio zibethinus HOM05D002914 ORTHO05D003196 4.2e-07 58.2 61 49.2
Migut.B00310 Erythranthe guttata HOM05D002914 ORTHO05D003196 1.2e-06 56.6 87 39.1
Thecc.08G014700 Theobroma cacao HOM05D002914 ORTHO05D003196 1.2e-06 56.6 75 44.0
Rhsim05G0080600 Rhododendron simsii HOM05D002914 ORTHO05D003196 2.1e-06 55.8 89 43.8
Zm00001eb216960 Zea mays HOM05D002914 ORTHO05D003196 2.1e-06 55.8 77 41.6
Glyma.06G036600 Glycine max HOM05D002914 ORTHO05D003196 4.7e-06 54.7 66 43.9
Lj5P206T48 Lonicera japonica HOM05D002914 ORTHO05D003196 4.7e-06 54.7 70 44.3
TAR625G1140 Trochodendron aralioides HOM05D002914 ORTHO05D003196 4.7e-06 54.7 61 42.6
ECA236G0292 Erigeron canadensis HOM05D002914 ORTHO05D003196 8.0e-06 53.9 91 34.1
Gohir.D02G092940 Gossypium hirsutum HOM05D002914 ORTHO05D003196 8.0e-06 53.9 70 41.4
Gorai.005G104900 Gossypium raimondii HOM05D002914 ORTHO05D003196 8.0e-06 53.9 66 40.9
Sed0010504 Sechium edule HOM05D002914 ORTHO05D003196 8.0e-06 53.9 72 41.7
HPP92_023573 Vanilla planifolia HOM05D002914 ORTHO05D003196 8.0e-06 53.9 65 43.1


User provided reference genes

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