Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 3.6e-213 744.6 361 100.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.1e-188 663.3 361 86.4
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 3.1e-188 661.8 361 86.7
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.5e-187 659.4 361 86.1
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.7e-186 656.0 357 85.7
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.2e-186 655.6 361 85.3
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.2e-185 651.7 361 84.8
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 4.2e-185 651.4 361 84.8
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 9.3e-185 650.2 361 84.5
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.2e-184 649.8 361 83.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.6e-184 649.4 361 83.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.6e-184 649.4 358 85.2
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.1e-184 649.0 361 84.2
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.5e-184 648.3 361 84.2
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.3e-183 645.6 358 84.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.0e-183 645.2 361 84.2
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 3.0e-183 645.2 362 83.7
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 3.9e-183 644.8 361 83.7
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 8.7e-183 643.7 361 83.1
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.5e-182 642.9 361 83.7
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 3.3e-182 641.7 358 83.8
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.3e-182 641.3 361 82.8
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.8e-181 638.6 361 84.5
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 2.8e-181 638.6 358 83.0
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.8e-181 638.6 361 82.8
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 6.2e-181 637.5 358 82.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.1e-180 636.7 357 82.4
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.4e-180 636.3 358 83.0
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.4e-180 636.3 361 82.0
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 3.1e-180 635.2 358 82.7
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 5.3e-180 634.4 361 82.0
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 5.3e-180 634.4 361 82.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 5.3e-180 634.4 361 83.7
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 5.3e-180 634.4 371 81.7
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 6.9e-180 634.0 357 82.9
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.5e-179 632.9 361 81.4
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.6e-179 632.1 361 82.0
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 3.4e-179 631.7 361 82.0
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 5.8e-179 630.9 361 81.2
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.7e-178 629.4 357 82.6
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 2.9e-178 628.6 357 81.0
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 4.9e-178 627.9 361 80.9
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 6.5e-178 627.5 360 83.3
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 6.5e-178 627.5 361 80.9
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 8.4e-178 627.1 361 80.9
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.4e-177 626.3 361 83.1
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.4e-177 626.3 358 81.8
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.5e-177 625.5 361 80.1
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 4.2e-177 624.8 358 81.3
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.5e-177 624.4 360 83.1
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 5.5e-177 624.4 360 81.9
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.5e-177 624.4 360 81.9
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 5.5e-177 624.4 361 81.4
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 7.1e-177 624.0 358 81.3
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 9.3e-177 623.6 360 81.9
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.6e-176 622.9 416 73.3
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 3.5e-176 621.7 361 80.6
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 7.9e-176 620.5 396 75.5
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.9e-175 618.2 360 81.1
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.1e-175 617.8 400 75.5
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 8.7e-175 617.1 361 80.6
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 8.7e-175 617.1 339 85.3
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.1e-174 616.7 360 81.1
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.1e-174 616.7 361 80.1
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.5e-174 615.5 361 80.1
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 4.8e-173 611.3 358 80.2
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.1e-172 610.1 361 78.7
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 2.4e-172 609.0 357 79.0
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 4.1e-172 608.2 359 79.1
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 6.9e-172 607.4 360 81.7
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 2.6e-171 605.5 359 78.8
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 7.6e-171 604.0 387 73.9
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 7.6e-171 604.0 358 78.5
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 1.0e-170 603.6 359 78.0
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.7e-170 602.8 387 75.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 2.9e-170 602.1 359 78.0
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 7.2e-169 597.4 359 77.7
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 7.2e-169 597.4 359 77.7
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 7.2e-169 597.4 359 77.7
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 9.3e-169 597.0 359 77.4
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 9.3e-169 597.0 360 78.1
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 4.6e-168 594.7 359 77.2
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 6.1e-168 594.3 359 76.9
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.0e-167 593.6 357 77.9
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.8e-167 592.8 357 77.9
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 2.3e-167 592.4 428 69.2
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 3.9e-167 591.7 359 77.7
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 5.1e-167 591.3 361 77.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.5e-166 589.7 361 76.7
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 3.3e-166 588.6 359 77.2
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 7.4e-166 587.4 359 78.3
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 7.7e-163 577.4 366 73.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 2.2e-162 575.9 313 86.6
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 5.0e-162 574.7 366 72.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.3e-158 562.0 357 73.7
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 5.0e-154 548.1 361 73.1
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.7e-152 542.3 336 76.5
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 7.9e-152 540.8 302 84.1
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 8.8e-151 537.3 312 82.4
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 7.2e-145 517.7 306 80.1
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 4.7e-144 515.0 403 64.5
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 8.0e-144 514.2 359 68.5
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 5.7e-142 508.1 357 67.8
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.3e-141 506.9 359 67.1
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 2.2e-141 506.1 353 72.0
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.0e-138 497.3 359 67.1
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.0e-127 460.7 364 65.7
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 2.6e-126 456.1 368 61.4
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 9.8e-126 454.1 361 63.7
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 3.8e-122 442.2 241 86.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.1e-121 440.7 252 83.3
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.2e-110 404.1 239 79.9
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.3e-106 390.6 211 86.3
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.1e-96 356.7 205 80.5
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 9.9e-70 268.1 180 71.7
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 7.9e-67 258.5 152 76.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.8e-61 239.6 154 73.4
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 7.6e-54 215.3 118 81.4
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.5e-52 210.3 126 77.0
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 3.7e-48 196.4 326 37.7
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.6e-43 181.0 207 48.3
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.6e-35 154.5 98 75.5
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.6e-33 147.1 117 65.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 4.4e-25 119.8 59 89.8
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 7.0e-23 112.5 111 55.0
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 8.8e-18 95.5 79 62.0
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 3.8e-13 80.1 51 68.6
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.5e-12 77.4 37 86.5
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 7.2e-12 75.9 162 34.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 7.5e-09 65.9 292 26.0


User provided reference genes

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