Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 4.9e-114 414.5 206 100.0
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 1.5e-59 233.4 205 63.9
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 7.2e-57 224.6 204 62.3
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 1.4e-55 220.3 214 62.1
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 7.4e-54 214.5 209 58.4
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 2.8e-53 212.6 214 59.3
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 4.5e-51 205.3 203 57.1
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 5.9e-51 204.9 203 59.6
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 4.2e-49 198.7 189 57.7
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 9.4e-49 197.6 206 53.9
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 1.6e-48 196.8 215 54.4
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 2.1e-48 196.4 208 56.2
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 6.1e-48 194.9 213 54.0
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 8.0e-48 194.5 225 55.6
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 1.4e-47 193.7 218 51.4
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 3.0e-47 192.6 198 59.6
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 2.0e-46 189.9 213 51.6
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 9.7e-46 187.6 218 50.5
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 9.7e-46 187.6 217 51.2
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 1.3e-45 187.2 213 52.1
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 3.7e-45 185.7 230 49.6
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 4.8e-45 185.3 215 51.6
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 8.2e-45 184.5 214 51.9
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 8.2e-45 184.5 216 51.9
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 1.1e-44 184.1 191 52.4
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.4e-44 183.7 216 51.4
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 3.1e-44 182.6 215 50.7
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 5.3e-44 181.8 209 52.2
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 7.0e-44 181.4 201 49.8
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 7.0e-44 181.4 211 51.2
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 1.2e-43 180.6 215 50.2
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 1.2e-43 180.6 201 55.7
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 1.2e-43 180.6 209 51.2
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 2.0e-43 179.9 200 51.0
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 4.5e-43 178.7 215 48.8
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 5.9e-43 178.3 184 57.6
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 1.0e-42 177.6 223 48.4
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 2.9e-42 176.0 197 50.8
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 6.5e-42 174.9 225 50.7
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.5e-41 173.7 225 50.2
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 1.5e-41 173.7 208 49.0
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.9e-41 173.3 204 52.5
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.9e-41 173.3 204 52.5
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.2e-41 172.6 221 50.2
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 9.4e-41 171.0 216 49.5
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 9.4e-41 171.0 212 48.6
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 1.6e-40 170.2 203 49.3
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 2.1e-40 169.9 212 49.5
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 2.7e-40 169.5 216 49.1
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.6e-40 169.1 216 49.5
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.6e-40 169.1 201 49.8
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 3.6e-40 169.1 208 47.6
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 3.6e-40 169.1 184 55.4
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 4.7e-40 168.7 185 51.9
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 8.0e-40 167.9 225 49.3
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 8.0e-40 167.9 225 49.3
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 8.0e-40 167.9 225 49.3
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.0e-39 167.5 201 50.2
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.4e-39 167.2 201 49.3
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 1.4e-39 167.2 183 53.0
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 1.8e-39 166.8 220 47.3
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 4.0e-39 165.6 209 46.9
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 8.8e-39 164.5 209 48.3
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 2.0e-38 163.3 222 48.2
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 2.6e-38 162.9 191 51.8
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 2.6e-38 162.9 163 58.3
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 9.8e-38 161.0 205 50.7
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 1.3e-37 160.6 218 45.4
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 1.3e-37 160.6 211 50.7
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 3.7e-37 159.1 188 49.5
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 1.4e-36 157.1 202 49.0
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 5.4e-36 155.2 224 44.6
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 9.1e-36 154.5 189 50.3
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 4.5e-35 152.1 203 46.3
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 4.5e-35 152.1 193 50.3
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 2.3e-34 149.8 204 48.0
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 2.9e-34 149.4 209 44.5
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 3.8e-34 149.1 217 45.6
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 6.5e-34 148.3 208 44.7
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 1.1e-33 147.5 212 44.3
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 1.1e-33 147.5 213 45.5
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 1.1e-33 147.5 191 49.2
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 1.5e-33 147.1 193 48.2
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 1.9e-33 146.7 207 42.0
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 2.5e-33 146.4 225 44.9
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 7.2e-33 144.8 191 47.1
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 9.5e-33 144.4 119 59.7
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 1.2e-32 144.1 222 45.9
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 1.2e-32 144.1 206 44.2
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 2.8e-32 142.9 225 44.9
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 3.6e-32 142.5 207 47.3
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 1.0e-31 141.0 202 47.0
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 1.8e-31 140.2 201 45.8
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 4.0e-31 139.0 182 45.6
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 4.0e-31 139.0 122 62.3
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 6.8e-31 138.3 206 43.2
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 8.9e-31 137.9 220 40.0
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 8.9e-31 137.9 220 43.2
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 1.2e-30 137.5 191 44.5
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 1.2e-30 137.5 198 42.9
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 1.5e-30 137.1 187 45.5
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 2.0e-30 136.7 203 47.8
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 2.6e-30 136.3 200 44.5
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 2.6e-30 136.3 191 44.5
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 2.6e-30 136.3 238 40.8
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 5.7e-30 135.2 192 44.3
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 5.7e-30 135.2 202 43.1
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 5.7e-30 135.2 218 43.6
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 7.5e-30 134.8 191 44.0
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 7.5e-30 134.8 204 42.2
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 7.5e-30 134.8 198 43.4
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 1.7e-29 133.7 201 45.3
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 3.7e-29 132.5 187 44.4
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 3.7e-29 132.5 215 42.3
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 4.9e-29 132.1 216 43.1
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 6.3e-29 131.7 144 50.7
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 8.3e-29 131.3 208 42.3
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 8.3e-29 131.3 218 43.6
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 1.1e-28 131.0 220 44.1
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.1e-28 131.0 205 43.9
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 1.4e-28 130.6 184 42.4
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 1.8e-28 130.2 215 41.4
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 1.8e-28 130.2 184 42.4
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 1.8e-28 130.2 226 42.5
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 2.4e-28 129.8 193 42.5
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 2.4e-28 129.8 186 43.0
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.4e-28 129.8 218 39.9
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 3.1e-28 129.4 183 43.2
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 3.1e-28 129.4 183 43.2
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 4.1e-28 129.0 115 60.9
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 7.0e-28 128.3 209 38.8
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 9.2e-28 127.9 213 41.3
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 1.2e-27 127.5 227 40.5
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 2.0e-27 126.7 157 49.7
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 5.9e-27 125.2 186 42.5
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 1.0e-26 124.4 186 40.9
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 1.3e-26 124.0 193 44.0
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.7e-26 123.6 152 48.0
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 2.9e-26 122.9 216 38.4
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 3.8e-26 122.5 174 42.5
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 3.8e-26 122.5 197 39.6
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 6.6e-26 121.7 184 40.8
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 1.1e-25 120.9 220 38.6
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 1.5e-25 120.6 186 39.8
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 1.9e-25 120.2 175 41.7
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 3.3e-25 119.4 184 39.7
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 3.3e-25 119.4 170 45.3
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 7.3e-25 118.2 194 41.8
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 2.1e-24 116.7 198 41.9
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 4.7e-24 115.5 212 39.2
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 4.7e-24 115.5 212 39.2
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 6.1e-24 115.2 213 39.0
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 1.8e-23 113.6 183 43.2
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 2.3e-23 113.2 196 42.9
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 1.5e-22 110.5 182 39.0
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 9.8e-22 107.8 207 40.1
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 2.2e-21 106.7 143 45.5
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 1.6e-19 100.5 142 44.4
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.6e-19 100.5 274 34.7
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 2.7e-19 99.8 143 44.1
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 2.7e-19 99.8 187 42.2
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 4.6e-19 99.0 115 51.3
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 3.0e-18 96.3 138 42.8
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 8.6e-18 94.7 195 36.4
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 1.5e-17 94.0 195 37.9
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 1.9e-17 93.6 195 35.9
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 3.3e-17 92.8 195 35.9
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 5.6e-17 92.0 168 35.1
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 2.1e-16 90.1 203 36.9
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 6.2e-16 88.6 194 38.1
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 1.1e-15 87.8 195 37.4
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.1e-15 87.8 135 45.9
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 1.4e-15 87.4 195 35.9
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 2.3e-15 86.7 191 37.2
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 3.1e-15 86.3 168 32.7
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 4.0e-15 85.9 212 35.8
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 5.2e-15 85.5 194 37.6
Gohir.A04G052101 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.6e-14 83.2 110 47.3
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 2.9e-13 79.7 103 46.6
Zm00001eb067170 Zea mays HOM05D003703 ORTHO05D004278 2.9e-13 79.7 212 33.0
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 4.9e-13 79.0 129 39.5
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 7.0e-12 75.1 158 34.2
Aa31sc24G60 Aethionema arabicum HOM05D003703 ORTHO05D004278 8.6e-10 68.2 63 60.3
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 2.1e-08 63.5 129 37.2


User provided reference genes

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