Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 3.0e-154 548.5 287 100.0
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 6.0e-102 374.8 302 67.9
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.5e-92 342.8 189 86.8
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 1.6e-91 340.1 187 86.1
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 1.5e-89 333.6 193 82.4
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.3e-88 330.5 195 81.0
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 3.8e-88 328.9 197 79.7
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.1e-87 327.4 202 79.2
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 1.1e-87 327.4 187 82.4
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.4e-87 327.0 198 78.8
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.4e-87 326.2 190 80.5
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.4e-87 326.2 190 80.5
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 2.4e-87 326.2 191 81.2
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 3.2e-87 325.9 191 81.7
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 4.2e-87 325.5 180 85.0
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 4.2e-87 325.5 200 78.5
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 5.4e-87 325.1 198 77.3
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 7.1e-87 324.7 192 80.7
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 9.3e-87 324.3 190 81.6
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.2e-86 323.9 195 79.0
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.2e-86 323.9 197 79.2
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.6e-86 323.6 181 84.5
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.1e-86 323.2 180 84.4
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 2.7e-86 322.8 191 80.1
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 3.5e-86 322.4 181 84.0
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 4.6e-86 322.0 190 80.5
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 4.6e-86 322.0 288 59.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 6.0e-86 321.6 199 76.9
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 1.0e-85 320.9 201 74.1
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.3e-85 320.5 203 74.9
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 1.8e-85 320.1 187 79.1
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 1.8e-85 320.1 187 79.1
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 1.8e-85 320.1 187 79.1
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 1.8e-85 320.1 187 79.1
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.8e-85 320.1 196 77.0
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 2.3e-85 319.7 194 77.3
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 3.9e-85 318.9 200 75.5
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 5.1e-85 318.5 197 77.2
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 6.7e-85 318.2 194 75.8
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 8.7e-85 317.8 187 81.3
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 8.7e-85 317.8 204 74.5
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 1.5e-84 317.0 201 74.1
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.9e-84 316.6 191 77.0
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 2.5e-84 316.2 202 73.3
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 3.3e-84 315.8 185 77.8
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.3e-84 315.8 189 78.3
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 3.3e-84 315.8 272 62.1
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 4.3e-84 315.5 198 75.3
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 5.6e-84 315.1 192 75.5
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.3e-83 313.9 183 80.9
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 1.6e-83 313.5 182 80.2
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 3.7e-83 312.4 180 80.0
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 4.8e-83 312.0 192 77.6
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 4.8e-83 312.0 190 78.9
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 2.4e-82 309.7 188 79.3
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 4.0e-82 308.9 199 74.9
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 4.0e-82 308.9 199 74.9
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 5.3e-82 308.5 187 76.5
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 4.5e-81 305.4 182 77.5
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 4.9e-80 302.0 182 79.1
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 1.4e-79 300.4 187 77.0
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 1.9e-79 300.1 191 76.4
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.9e-79 300.1 193 75.1
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 1.9e-79 300.1 193 74.6
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 2.5e-79 299.7 191 73.3
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 2.5e-79 299.7 181 78.5
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.2e-79 298.9 191 73.8
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 4.2e-79 298.9 185 78.4
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 5.5e-79 298.5 192 76.0
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.2e-78 297.4 182 78.0
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 1.6e-78 297.0 303 54.1
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.6e-78 297.0 192 74.0
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 6.0e-78 295.0 273 57.1
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 1.0e-77 294.3 199 71.9
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.8e-77 293.5 181 76.8
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 1.5e-76 290.4 179 73.2
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 3.1e-74 282.7 195 69.2
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 3.8e-72 275.8 226 62.4
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 8.4e-72 274.6 198 67.7
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 1.4e-71 273.9 165 75.2
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.2e-70 270.8 156 82.1
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 2.1e-70 270.0 274 51.8
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 2.1e-70 270.0 165 77.6
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 7.9e-70 268.1 161 79.5
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.9e-68 263.5 179 72.1
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.9e-68 263.5 156 80.8
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.1e-66 257.7 272 54.0
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.4e-66 257.3 172 69.2
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.8e-66 256.9 150 79.3
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.2e-63 245.7 189 66.1
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.1e-58 231.1 148 75.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.0e-56 224.6 166 64.5
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 5.5e-55 218.8 135 77.0
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 5.5e-55 218.8 183 55.2
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 2.7e-54 216.5 185 54.6
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.8e-53 213.8 182 54.9
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.6e-52 209.9 182 55.5
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.1e-50 204.5 117 81.2
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.8e-50 203.8 144 72.9
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 9.1e-50 201.4 155 65.2
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.5e-49 200.7 172 62.2
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.0e-49 200.3 191 57.6
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 6.5e-48 195.3 179 49.7
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.3e-43 181.0 174 55.2
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 2.2e-40 170.2 98 79.6
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.1e-38 163.7 98 77.6
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 1.0e-37 161.4 198 44.9
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.4e-37 161.0 115 67.0
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.8e-37 160.6 247 38.1
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.6e-36 156.8 91 80.2
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 3.7e-35 152.9 184 42.4
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 3.6e-30 136.3 198 38.4
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.4e-21 107.8 73 65.8
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.9e-10 70.9 44 75.0
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 3.3e-07 60.1 62 40.3
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 2.8e-06 57.0 50 52.0


User provided reference genes

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