Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 4.3e-147 524.6 265 100.0
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.2e-99 367.1 271 70.5
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 8.3e-90 334.3 274 65.3
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 2.1e-85 319.7 281 59.1
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.9e-81 306.6 263 57.8
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 2.4e-81 306.2 230 66.5
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 3.2e-81 305.8 281 58.0
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-80 303.9 272 57.4
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-80 303.9 272 57.4
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 3.5e-80 302.4 213 68.5
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 6.0e-80 301.6 212 68.4
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 3.9e-79 298.9 210 69.0
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 5.0e-79 298.5 273 58.2
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 7.3e-78 294.7 273 56.8
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 2.8e-77 292.7 269 58.0
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 8.0e-77 291.2 214 66.4
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 3.1e-76 289.3 248 60.9
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 4.0e-76 288.9 204 66.2
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 4.0e-76 288.9 274 55.8
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 4.0e-76 288.9 219 64.4
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 3.4e-75 285.8 215 65.1
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 4.4e-75 285.4 208 65.4
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 5.8e-75 285.0 214 65.4
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.7e-74 283.5 214 64.0
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.9e-73 280.0 222 63.5
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 3.2e-73 279.3 276 56.5
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 5.4e-73 278.5 209 64.1
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.1e-72 276.6 231 61.0
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.7e-72 276.2 268 56.3
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 4.6e-72 275.4 211 63.5
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.0e-71 274.2 216 61.6
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.0e-71 274.2 268 56.3
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.3e-71 273.9 270 54.4
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 2.3e-71 273.1 231 60.2
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 2.3e-71 273.1 195 66.7
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 3.0e-71 272.7 268 56.7
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 3.9e-71 272.3 236 59.3
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 3.9e-71 272.3 214 61.2
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 5.1e-71 271.9 229 59.0
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 6.6e-71 271.6 271 53.1
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 8.6e-71 271.2 212 59.9
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 2.5e-70 269.6 270 53.3
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.3e-70 269.2 280 52.9
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 4.3e-70 268.9 263 55.1
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 9.5e-70 267.7 216 58.8
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 9.5e-70 267.7 214 60.7
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 9.5e-70 267.7 228 60.5
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.6e-69 266.9 275 50.9
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 2.8e-69 266.2 280 52.5
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 3.6e-69 265.8 246 57.7
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 6.2e-69 265.0 214 59.8
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 8.1e-69 264.6 274 52.2
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.1e-68 264.2 253 54.9
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.8e-68 263.5 250 55.6
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 4.0e-68 262.3 250 54.4
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 6.8e-68 261.5 223 58.3
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 8.9e-68 261.2 214 60.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 5.8e-67 258.5 270 52.6
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 5.8e-67 258.5 237 55.7
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.8e-67 258.5 237 55.7
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 7.5e-67 258.1 214 62.1
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 9.9e-67 257.7 212 60.4
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 4.9e-66 255.4 254 54.7
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 8.3e-66 254.6 216 58.3
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.1e-65 254.2 216 57.9
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.4e-65 253.8 212 59.4
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 3.2e-65 252.7 198 61.1
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 4.6e-64 248.8 201 58.7
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 6.0e-64 248.4 198 60.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 6.0e-64 248.4 198 60.6
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 5.1e-63 245.4 255 53.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.1e-63 245.4 223 57.0
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.1e-63 245.4 206 62.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 8.6e-63 244.6 220 57.3
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 1.9e-62 243.4 228 55.3
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.5e-62 243.0 263 50.2
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 2.5e-62 243.0 206 61.2
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.3e-62 242.7 252 51.2
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.3e-62 242.7 252 51.2
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.3e-62 242.7 252 51.2
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 3.3e-62 242.7 252 52.4
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 4.3e-62 242.3 263 50.2
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 4.7e-61 238.8 259 50.6
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 4.7e-61 238.8 250 52.0
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.5e-59 233.8 237 52.7
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 2.6e-59 233.0 243 52.3
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 7.6e-59 231.5 248 52.0
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 2.2e-58 229.9 188 60.6
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 6.4e-58 228.4 250 51.2
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 8.4e-58 228.0 260 49.2
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 8.4e-58 228.0 260 49.2
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.1e-57 227.6 189 59.3
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 7.1e-57 224.9 259 49.8
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 6.6e-55 218.4 197 55.8
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.5e-54 217.2 234 47.9
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.9e-54 216.9 217 49.8
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 3.1e-52 209.5 246 48.4
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.9e-49 200.3 212 50.5
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 7.1e-49 198.4 198 53.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 7.1e-49 198.4 201 53.2
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 9.9e-43 177.9 202 49.5
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.6e-40 170.6 191 53.4
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 4.6e-40 169.1 156 55.1
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.6e-32 144.1 187 41.2
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.6e-29 134.0 199 38.7
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.4e-28 130.2 136 48.5
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.6e-21 107.5 188 38.3
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.9e-18 96.7 195 31.8
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 8.5e-18 95.1 212 29.7
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.2e-16 91.3 75 56.0
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 6.1e-16 89.0 124 40.3
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.8e-15 87.4 63 63.5
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 5.1e-15 85.9 169 33.1
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.3e-13 81.3 62 58.1
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 8.2e-13 78.6 71 59.2
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 2.4e-12 77.0 71 57.7


User provided reference genes

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