Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 1.5e-26 122.1 61 100.0
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 1.4e-16 89.0 58 72.4
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 5.3e-16 87.0 58 72.4
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.2e-15 85.9 51 72.5
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.2e-15 85.9 55 72.7
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 1.2e-15 85.9 58 70.7
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.2e-15 85.9 55 67.3
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 1.5e-15 85.5 57 66.7
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 2.0e-15 85.1 55 69.1
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 2.6e-15 84.7 58 70.7
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 2.6e-15 84.7 58 69.0
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 3.4e-15 84.3 57 66.7
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 5.9e-15 83.6 54 72.2
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 5.9e-15 83.6 50 72.0
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 7.7e-15 83.2 52 69.2
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 7.7e-15 83.2 55 67.3
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 7.7e-15 83.2 57 66.7
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 7.7e-15 83.2 60 65.0
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 7.7e-15 83.2 60 65.0
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 1.3e-14 82.4 55 67.3
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 2.2e-14 81.6 58 65.5
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 2.9e-14 81.3 56 66.1
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 2.9e-14 81.3 55 67.3
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 3.8e-14 80.9 55 65.5
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 5.0e-14 80.5 58 69.0
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 5.0e-14 80.5 65 58.5
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 6.5e-14 80.1 59 66.1
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 6.5e-14 80.1 59 66.1
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 6.5e-14 80.1 56 66.1
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 1.1e-13 79.3 58 62.1
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 1.1e-13 79.3 58 63.8
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 1.1e-13 79.3 51 64.7
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 1.1e-13 79.3 58 60.3
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 1.9e-13 78.6 58 60.3
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.9e-13 78.6 52 69.2
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 1.9e-13 78.6 57 66.7
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 2.5e-13 78.2 59 66.1
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 3.2e-13 77.8 58 63.8
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 4.2e-13 77.4 58 62.1
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 4.2e-13 77.4 54 66.7
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 4.2e-13 77.4 55 61.8
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 4.2e-13 77.4 58 58.6
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 1.6e-12 75.5 53 64.2
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 6.1e-12 73.6 60 65.0
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 7.9e-12 73.2 57 61.4
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 7.9e-12 73.2 57 61.4
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 7.9e-12 73.2 53 58.5
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 5.1e-11 70.5 51 64.7
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 3.7e-09 64.3 34 79.4
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 6.9e-08 60.1 37 67.6
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 9.1e-08 59.7 36 69.4
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 1.2e-07 59.3 35 68.6
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.7e-06 55.5 39 56.4
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 2.9e-06 54.7 37 59.5
Mapoly0005s0168 Marchantia polymorpha HOM05D004031 ORTHO05D011186 3.8e-06 54.3 48 45.8
Sed0004834 Sechium edule HOM05D004031 ORTHO05D011186 3.8e-06 54.3 59 45.8


User provided reference genes

Program Settings