Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 2.8e-94 348.6 175 100.0
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 1.5e-50 203.4 191 61.3
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 5.2e-48 194.9 196 59.2
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 2.6e-47 192.6 198 59.6
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.1e-42 177.2 174 58.0
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 3.3e-42 175.6 190 56.3
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 1.2e-39 167.2 186 55.4
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.5e-39 166.8 178 56.7
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.5e-39 166.8 178 56.7
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 1.7e-38 163.3 197 52.8
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 3.7e-38 162.2 199 52.8
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 4.9e-38 161.8 184 57.1
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 4.9e-38 161.8 179 55.3
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 6.4e-38 161.4 186 57.0
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 1.1e-37 160.6 199 51.8
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 1.1e-37 160.6 187 52.4
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 2.4e-37 159.5 189 52.4
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 2.4e-37 159.5 193 51.8
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 3.2e-37 159.1 171 54.4
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 4.1e-37 158.7 193 54.4
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 9.2e-37 157.5 196 53.1
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 1.6e-36 156.8 193 50.3
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 2.0e-36 156.4 191 52.4
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 2.7e-36 156.0 175 54.3
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 7.8e-36 154.5 191 48.7
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 1.0e-35 154.1 170 54.7
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 1.0e-35 154.1 204 49.0
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 1.3e-35 153.7 180 51.7
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 2.9e-35 152.5 189 50.8
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 5.0e-35 151.8 187 49.7
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 1.9e-34 149.8 188 48.9
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 1.9e-34 149.8 189 51.3
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 2.5e-34 149.4 190 48.4
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 5.6e-34 148.3 194 46.4
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 7.3e-34 147.9 161 55.9
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 7.3e-34 147.9 186 48.9
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 7.3e-34 147.9 189 49.2
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 7.3e-34 147.9 187 46.0
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 9.5e-34 147.5 174 52.3
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.2e-33 147.1 188 50.5
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.2e-33 147.1 188 50.5
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.6e-33 146.7 183 53.0
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.1e-33 146.4 188 50.5
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 3.6e-33 145.6 186 50.0
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.6e-33 145.6 183 52.5
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 3.6e-33 145.6 187 49.2
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 8.0e-33 144.4 176 52.3
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 1.0e-32 144.1 189 46.6
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.4e-32 143.7 202 50.0
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 1.8e-32 143.3 191 48.7
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.8e-32 143.3 182 48.9
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.8e-32 143.3 146 54.1
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 1.8e-32 143.3 177 49.7
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.1e-32 142.5 182 48.9
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 5.2e-32 141.7 173 50.3
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 6.8e-32 141.4 193 50.3
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 6.8e-32 141.4 192 49.5
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 8.9e-32 141.0 202 49.5
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 1.5e-31 140.2 173 50.9
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 2.0e-31 139.8 171 53.8
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 2.0e-31 139.8 182 47.8
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 3.4e-31 139.0 180 48.9
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 3.4e-31 139.0 190 51.6
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 4.4e-31 138.7 183 48.1
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 4.4e-31 138.7 203 49.8
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 4.4e-31 138.7 188 51.1
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 9.8e-31 137.5 198 48.5
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 9.8e-31 137.5 190 50.0
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 9.8e-31 137.5 190 50.0
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 9.8e-31 137.5 190 50.0
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 9.8e-31 137.5 190 47.4
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 1.7e-30 136.7 200 47.5
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 1.7e-30 136.7 164 50.6
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 2.2e-30 136.3 188 49.5
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 4.9e-30 135.2 176 49.4
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 6.4e-30 134.8 183 45.9
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 8.3e-30 134.4 191 47.1
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 1.1e-29 134.0 196 45.9
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.4e-29 133.7 221 43.4
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 1.9e-29 133.3 181 49.7
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 4.1e-29 132.1 178 48.9
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 5.4e-29 131.7 185 48.1
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 5.4e-29 131.7 185 46.5
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 7.0e-29 131.3 198 46.5
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 1.6e-28 130.2 195 44.6
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 2.0e-28 129.8 188 46.8
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 2.0e-28 129.8 188 43.1
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.7e-28 129.4 187 45.5
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 4.6e-28 128.6 171 49.1
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 6.0e-28 128.3 187 47.1
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 7.8e-28 127.9 196 44.9
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 1.0e-27 127.5 189 47.1
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.3e-27 127.1 187 44.9
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 1.7e-27 126.7 185 44.9
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 1.7e-27 126.7 199 44.7
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 2.3e-27 126.3 191 44.0
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 2.3e-27 126.3 184 44.6
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 2.3e-27 126.3 196 43.9
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 2.3e-27 126.3 197 43.7
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 2.3e-27 126.3 189 48.7
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 3.0e-27 125.9 191 43.5
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 3.0e-27 125.9 180 44.4
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 3.9e-27 125.6 180 44.4
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 5.0e-27 125.2 183 44.3
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 6.6e-27 124.8 178 44.9
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 6.6e-27 124.8 183 44.3
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 6.6e-27 124.8 194 41.2
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 6.6e-27 124.8 203 40.9
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 1.1e-26 124.0 167 46.7
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 1.5e-26 123.6 177 44.1
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 3.3e-26 122.5 190 43.2
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 7.3e-26 121.3 189 45.0
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 9.5e-26 120.9 179 43.6
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 9.5e-26 120.9 182 42.9
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 1.2e-25 120.6 200 43.5
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 1.2e-25 120.6 190 44.7
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 2.1e-25 119.8 165 43.6
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 4.7e-25 118.6 189 40.7
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 4.7e-25 118.6 201 42.3
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 6.2e-25 118.2 118 57.6
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 8.1e-25 117.9 178 42.7
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 1.1e-24 117.5 178 42.7
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 1.4e-24 117.1 180 42.2
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.4e-24 117.1 195 42.6
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 5.2e-24 115.2 188 42.0
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 1.2e-23 114.0 187 42.8
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 2.0e-23 113.2 197 42.1
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 2.6e-23 112.8 192 43.8
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 3.4e-23 112.5 177 41.8
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 3.4e-23 112.5 189 39.2
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 4.4e-23 112.1 112 57.1
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 7.5e-23 111.3 151 47.7
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 7.5e-23 111.3 197 39.6
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 9.8e-23 110.9 189 40.2
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 1.7e-22 110.2 115 53.9
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 2.2e-22 109.8 207 40.6
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 2.9e-22 109.4 202 40.6
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 3.7e-22 109.0 157 45.2
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 4.9e-22 108.6 166 42.8
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 8.3e-22 107.8 218 37.6
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 1.1e-21 107.5 214 38.8
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 1.4e-21 107.1 184 41.3
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 1.4e-21 107.1 229 38.4
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 1.9e-21 106.7 174 40.8
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 2.4e-21 106.3 145 46.9
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.4e-21 106.3 204 39.7
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 3.2e-21 105.9 186 40.3
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 3.2e-21 105.9 184 41.8
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 4.1e-21 105.5 186 40.3
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 4.1e-21 105.5 161 45.3
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 7.8e-20 101.3 272 33.5
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 1.0e-19 100.9 198 39.4
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 1.3e-19 100.5 145 44.1
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 5.1e-19 98.6 182 41.2
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 1.1e-18 97.4 177 41.2
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 1.1e-18 97.4 196 39.3
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 1.5e-18 97.1 213 35.7
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 1.5e-18 97.1 213 35.7
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 1.9e-18 96.7 214 35.5
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 4.3e-18 95.5 175 39.4
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 9.5e-18 94.4 180 39.4
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 9.5e-18 94.4 181 38.7
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 2.1e-17 93.2 150 40.0
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 4.7e-17 92.0 105 50.5
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 3.1e-16 89.4 173 40.5
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 3.4e-15 85.9 155 35.5
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 7.6e-15 84.7 171 37.4
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 9.9e-15 84.3 177 37.3
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 9.9e-15 84.3 173 37.6
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 9.9e-15 84.3 134 39.6
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 1.7e-14 83.6 173 35.8
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 2.2e-14 83.2 177 36.7
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 2.2e-14 83.2 178 34.8
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 3.7e-14 82.4 118 48.3
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 4.9e-14 82.0 137 40.1
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 6.4e-14 81.6 171 36.8
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 1.2e-12 77.4 155 31.6
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 6.0e-12 75.1 89 44.9
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 2.3e-11 73.2 117 38.5
Aa31sc24G60 Aethionema arabicum HOM05D003703 ORTHO05D004278 8.6e-11 71.2 58 62.1
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 4.3e-10 68.9 152 37.5
Gohir.A04G052101 Gossypium hirsutum HOM05D003703 ORTHO05D004278 9.6e-10 67.8 87 47.1
Zm00001eb067170 Zea mays HOM05D003703 ORTHO05D004278 2.1e-09 66.6 213 29.1
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 1.2e-07 60.8 148 36.5
MELO3C009637.2 Cucumis melo HOM05D003703 ORTHO05D004278 5.8e-07 58.5 111 36.9


User provided reference genes

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