Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.5e-104 383.3 248 100.0
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.1e-75 287.3 251 72.1
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.5e-72 276.9 272 65.4
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 8.9e-70 267.7 249 69.5
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 5.6e-64 248.4 249 61.4
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.6e-63 245.7 252 57.1
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 4.0e-62 242.3 249 65.5
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 6.8e-62 241.5 252 56.7
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 2.0e-61 240.0 248 59.7
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 3.4e-61 239.2 250 61.2
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.7e-60 236.9 254 60.2
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 2.9e-60 236.1 248 57.3
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 4.9e-60 235.3 247 65.2
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 8.4e-60 234.6 253 52.2
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.1e-59 234.2 249 63.1
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-59 234.2 248 53.2
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 1.1e-59 234.2 250 57.6
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 1.4e-59 233.8 253 54.2
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.9e-59 233.4 248 58.5
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 3.2e-59 232.6 249 57.4
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 5.4e-59 231.9 255 57.6
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 5.4e-59 231.9 249 59.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 7.1e-59 231.5 249 57.0
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 7.1e-59 231.5 250 56.0
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 7.1e-59 231.5 251 62.9
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.2e-58 230.7 250 56.0
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 1.6e-58 230.3 250 58.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.6e-58 230.3 249 57.0
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.6e-58 230.3 247 59.5
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 1.6e-58 230.3 253 58.9
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 2.1e-58 229.9 252 57.9
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.1e-58 229.9 247 57.1
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 3.5e-58 229.2 250 58.4
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.5e-58 229.2 246 56.9
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 3.5e-58 229.2 250 50.8
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 6.0e-58 228.4 253 57.7
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.0e-57 227.6 255 60.0
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.3e-57 227.3 252 56.7
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.3e-57 227.3 252 57.9
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.7e-57 226.9 254 58.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 1.7e-57 226.9 251 55.4
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.7e-57 226.9 248 56.5
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.3e-57 226.5 250 57.6
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 3.0e-57 226.1 252 59.9
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 3.0e-57 226.1 251 55.8
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 3.0e-57 226.1 248 57.7
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.9e-57 225.7 243 57.2
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 3.9e-57 225.7 243 57.2
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 5.1e-57 225.3 252 57.1
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 1.1e-56 224.2 247 55.5
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.1e-56 224.2 251 54.6
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-56 223.0 249 57.0
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 7.3e-56 221.5 249 55.8
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.2e-55 220.7 251 58.2
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.2e-55 220.7 251 56.2
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 2.1e-55 219.9 252 54.8
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.8e-55 219.5 251 57.8
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 2.8e-55 219.5 249 54.6
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.8e-55 219.5 244 66.0
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 3.6e-55 219.2 244 57.0
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.1e-54 217.6 249 56.2
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.1e-54 217.6 248 55.2
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 1.4e-54 217.2 251 55.4
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 1.4e-54 217.2 251 55.4
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.4e-54 217.2 249 56.2
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.8e-54 216.9 251 55.4
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 2.4e-54 216.5 281 49.1
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 5.3e-54 215.3 244 53.3
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.2e-53 214.2 250 54.8
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.6e-53 213.0 247 58.3
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 3.4e-53 212.6 244 50.4
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 4.4e-53 212.2 252 63.9
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.9e-52 209.5 245 53.5
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 3.8e-52 209.1 252 52.8
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 3.8e-52 209.1 248 54.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 4.9e-52 208.8 257 55.3
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 6.4e-52 208.4 233 59.7
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 4.2e-51 205.7 250 53.6
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 5.4e-51 205.3 237 62.4
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.2e-50 204.1 254 49.2
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 2.1e-50 203.4 249 55.4
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.3e-49 200.7 252 56.3
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.0e-49 199.5 212 56.6
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 3.0e-49 199.5 251 51.4
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 6.6e-49 198.4 251 49.0
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 3.6e-47 192.6 221 57.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.2e-45 187.6 204 54.9
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 5.8e-45 185.3 240 51.7
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 9.9e-45 184.5 221 57.0
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 9.9e-45 184.5 247 50.6
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.0e-41 174.5 247 51.0
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 4.3e-40 169.1 230 46.5
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 7.4e-40 168.3 250 43.6
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 6.2e-39 165.2 188 49.5
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 5.3e-38 162.2 187 51.3
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 4.5e-37 159.1 187 50.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 9.9e-37 157.9 260 43.5
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.2e-36 156.8 180 47.8
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 7.9e-34 148.3 249 43.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.3e-33 146.7 247 38.1
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.9e-32 143.7 273 40.3
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.3e-31 141.0 155 52.9
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 4.8e-31 139.0 258 34.9
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-27 126.7 171 50.9
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.1e-27 125.2 151 45.0
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 3.0e-25 119.8 158 46.8
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 2.0e-21 107.1 249 36.5
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.4e-21 106.3 118 55.1
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 1.7e-20 104.0 234 38.0
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-17 94.0 215 36.7
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 6.7e-17 92.0 161 36.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.8e-17 91.7 95 50.5
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.8e-17 91.7 95 50.5
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.1e-14 84.7 330 26.4
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 6.9e-14 82.0 67 62.7
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.1e-11 74.7 121 41.3
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 9.4e-11 71.6 45 66.7
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 3.9e-09 66.2 57 56.1


User provided reference genes

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