Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.3e-307 1058.9 554 100.0
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.1e-242 843.2 570 77.2
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.7e-217 759.6 571 72.3
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.7e-214 749.6 567 70.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 8.6e-214 747.3 574 71.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 4.7e-212 741.5 573 70.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.5e-210 736.5 572 69.6
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 3.4e-210 735.3 568 71.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.9e-209 732.3 564 69.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 9.2e-208 727.2 563 70.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 9.2e-208 727.2 569 70.3
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 7.8e-207 724.2 567 69.8
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.9e-205 719.5 570 68.8
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.3e-205 718.8 556 68.2
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.1e-203 713.8 569 66.3
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 3.4e-202 708.8 591 65.3
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 5.8e-202 708.0 556 67.6
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 5.8e-202 708.0 559 68.5
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.9e-201 705.7 569 66.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.7e-201 705.3 569 66.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 6.4e-201 704.5 563 66.6
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-200 702.6 558 68.3
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 3.2e-200 702.2 572 66.8
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.1e-200 701.8 572 65.2
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 9.2e-200 700.7 558 68.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 2.1e-199 699.5 556 67.4
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 7.8e-199 697.6 562 66.9
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.0e-198 697.2 572 65.2
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-198 696.0 561 67.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.0e-198 695.7 572 65.2
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.6e-198 694.5 558 67.9
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 7.3e-197 691.0 562 65.5
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 7.3e-197 691.0 559 66.5
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 9.5e-197 690.6 572 64.3
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.2e-196 690.3 560 64.8
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.1e-196 689.5 572 64.5
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.1e-196 689.5 568 65.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.1e-196 689.5 589 63.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.8e-196 689.1 558 67.7
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.8e-196 689.1 573 66.5
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.6e-196 688.7 563 66.8
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 4.7e-196 688.3 560 64.8
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 8.1e-196 687.6 568 65.0
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.3e-195 686.0 571 66.4
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.3e-195 686.0 563 66.3
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.0e-194 682.9 570 64.6
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.6e-194 682.6 569 64.0
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 3.4e-194 682.2 572 63.6
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.4e-194 682.2 573 65.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 6.4e-193 677.9 562 63.9
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 8.3e-193 677.6 560 63.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.9e-192 676.4 560 66.4
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.9e-192 676.4 572 63.5
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 4.1e-192 675.2 554 65.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 4.1e-192 675.2 566 64.0
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.2e-191 673.7 560 63.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.2e-191 673.7 571 63.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.5e-191 672.2 571 63.7
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 3.5e-191 672.2 569 63.8
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 6.0e-191 671.4 565 63.9
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 7.8e-191 671.0 558 63.3
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.7e-190 669.8 576 64.1
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.3e-190 669.5 568 62.5
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 3.9e-190 668.7 568 63.7
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 5.1e-190 668.3 560 63.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.1e-190 668.3 561 63.5
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 6.6e-190 667.9 565 65.3
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.9e-189 666.4 560 63.0
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.3e-189 665.6 558 65.9
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.3e-189 665.6 566 62.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 5.6e-189 664.8 579 62.7
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 9.5e-189 664.1 577 61.9
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 9.5e-189 664.1 567 63.8
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 6.2e-188 661.4 572 62.9
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.4e-187 660.2 634 58.0
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 9.9e-186 654.1 564 61.9
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.2e-185 652.9 563 62.5
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 4.9e-185 651.7 566 62.2
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 9.0e-179 630.9 513 66.5
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.0e-178 629.8 560 60.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.0e-178 629.8 560 60.9
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.6e-178 629.4 560 60.7
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.6e-178 629.4 560 60.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 7.6e-178 627.9 560 60.5
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.9e-177 625.2 568 60.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.1e-173 614.0 524 64.7
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.6e-172 610.1 527 63.0
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.1e-171 607.4 569 58.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.0e-170 603.2 557 60.1
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 4.5e-170 602.1 485 68.5
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.4e-168 597.0 574 59.6
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.4e-168 596.3 570 57.7
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 6.0e-167 591.7 579 56.1
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 3.1e-163 579.3 634 52.2
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 5.3e-147 525.4 504 57.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 4.1e-131 472.6 403 63.5
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 9.1e-123 444.9 449 57.2
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 4.5e-114 416.0 579 42.1
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.2e-113 413.7 553 43.4
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 9.8e-109 398.3 400 59.0
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 6.3e-100 369.0 296 68.6
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 7.3e-96 355.5 588 37.8
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 3.1e-94 350.1 551 40.5
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.3e-92 344.7 594 37.7
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 9.2e-91 338.6 236 74.6
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.6e-87 327.8 304 61.8
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 2.9e-84 317.0 225 71.6
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-79 301.6 245 65.3
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.7e-73 281.2 261 59.4
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 4.2e-67 260.0 367 47.1
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 5.3e-62 243.0 174 64.9
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 8.1e-55 219.2 153 74.5
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 4.9e-52 209.9 575 31.7
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 3.3e-48 197.2 579 28.3
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-38 165.6 151 60.3
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 5.0e-36 156.8 155 61.9
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.7e-20 105.1 65 72.3
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.8e-14 85.1 54 83.3
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.3e-07 62.4 85 43.5


User provided reference genes

Program Settings