Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 4.5e-132 474.6 234 100.0
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 5.4e-101 371.3 232 79.3
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 6.6e-91 337.8 234 69.2
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.6e-89 333.2 223 71.7
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.6e-89 333.2 223 71.7
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 6.9e-88 327.8 227 68.3
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 9.9e-87 323.9 239 65.7
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.7e-86 323.2 209 69.9
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 4.9e-86 321.6 234 67.1
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 4.2e-85 318.5 219 66.2
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 1.6e-84 316.6 227 66.5
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 2.1e-84 316.2 222 66.7
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.7e-84 315.8 233 64.4
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 3.5e-84 315.5 222 66.7
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 3.5e-84 315.5 234 64.1
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 1.0e-83 313.9 210 70.0
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 1.3e-83 313.5 226 65.9
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 1.3e-83 313.5 232 64.2
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 1.7e-83 313.2 210 67.6
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.7e-83 313.2 230 63.9
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.7e-83 313.2 251 65.7
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.7e-83 313.2 232 64.2
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 1.7e-83 313.2 209 68.4
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 3.0e-83 312.4 234 63.2
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 3.9e-83 312.0 216 65.7
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 3.9e-83 312.0 211 66.4
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 3.9e-83 312.0 222 66.2
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 5.1e-83 311.6 219 64.8
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 6.6e-83 311.2 234 62.4
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 8.7e-83 310.8 214 67.3
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 3.3e-82 308.9 205 65.9
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 4.3e-82 308.5 212 68.4
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 5.6e-82 308.1 219 64.4
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 9.6e-82 307.4 218 67.0
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 9.6e-82 307.4 235 64.3
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.3e-81 307.0 208 68.3
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.3e-81 307.0 230 62.2
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 1.3e-81 307.0 230 63.9
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.6e-81 306.6 216 64.4
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.6e-81 306.6 203 69.0
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.6e-81 306.6 207 67.6
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 1.6e-81 306.6 212 65.1
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.8e-81 305.8 221 65.2
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.8e-81 305.8 221 65.2
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 4.8e-81 305.1 205 66.3
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 4.8e-81 305.1 211 65.4
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 6.2e-81 304.7 218 66.5
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 8.1e-81 304.3 206 68.4
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 8.1e-81 304.3 217 65.9
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 8.1e-81 304.3 216 63.9
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 8.1e-81 304.3 206 65.5
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 3.1e-80 302.4 205 65.4
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 3.1e-80 302.4 222 63.1
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 4.0e-80 302.0 207 68.1
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 5.3e-80 301.6 226 63.7
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 6.9e-80 301.2 235 62.6
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 1.2e-79 300.4 216 68.1
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.0e-79 299.7 235 63.4
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.6e-79 299.3 235 62.6
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 2.6e-79 299.3 215 62.8
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 3.4e-79 298.9 234 62.4
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 9.9e-79 297.4 225 63.1
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 1.3e-78 297.0 207 66.7
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 1.1e-77 293.9 234 62.0
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.4e-77 293.5 228 60.1
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.4e-77 293.5 234 59.0
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 3.2e-77 292.4 234 58.5
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 4.2e-77 292.0 207 64.7
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 2.7e-76 289.3 210 63.8
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 3.5e-76 288.9 240 57.1
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 4.3e-74 282.0 218 57.8
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 7.4e-74 281.2 221 58.4
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 2.1e-73 279.6 169 76.3
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 3.6e-73 278.9 221 58.8
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 1.1e-72 277.3 185 67.0
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 2.4e-72 276.2 221 57.9
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 4.0e-72 275.4 226 57.5
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 5.3e-72 275.0 209 63.2
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.7e-70 270.0 232 59.1
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 4.2e-69 265.4 196 63.8
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 6.0e-68 261.5 195 62.6
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.8e-67 260.0 212 62.7
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 6.7e-67 258.1 213 59.2
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 2.5e-66 256.1 198 62.6
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.4e-64 250.4 221 56.1
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 1.4e-64 250.4 165 70.3
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 9.0e-64 247.7 212 59.0
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 1.7e-62 243.4 166 67.5
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 2.2e-62 243.0 208 55.8
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 8.4e-62 241.1 176 64.2
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 3.9e-59 232.3 165 69.7
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.6e-57 226.9 196 56.1
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 6.3e-57 224.9 181 57.5
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.2e-55 220.7 197 56.9
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 2.0e-55 219.9 220 50.0
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 1.0e-51 207.6 244 47.1
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 1.1e-50 204.1 207 47.3
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 5.3e-48 195.3 133 69.9
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 1.3e-46 190.7 177 48.0
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 7.4e-42 174.9 210 43.3
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.3e-41 174.1 198 44.9
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.8e-40 170.2 105 71.4
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.5e-30 134.8 161 44.1
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 5.3e-24 115.5 93 51.6
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.2e-23 114.4 81 65.4
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 5.9e-23 112.1 98 54.1
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 2.3e-19 100.1 93 51.6
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 1.8e-16 90.5 92 44.6
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.5e-10 70.9 90 40.0
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.4e-08 63.5 61 49.2


User provided reference genes

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