Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 3.2e-41 171.4 92 100.0
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 1.2e-22 109.8 82 72.0
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 3.4e-22 108.2 89 61.8
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 4.4e-22 107.8 81 66.7
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 1.3e-21 106.3 91 67.0
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 2.2e-21 105.5 82 64.6
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 2.8e-21 105.1 86 65.1
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 6.3e-21 104.0 85 63.5
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 1.1e-20 103.2 85 62.4
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 1.8e-20 102.4 82 69.5
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 1.8e-20 102.4 86 66.3
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 2.4e-20 102.1 82 63.4
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 3.1e-20 101.7 78 66.7
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 7.0e-20 100.5 89 61.8
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 9.1e-20 100.1 95 56.8
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 1.6e-19 99.4 84 65.5
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 1.6e-19 99.4 83 63.9
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 2.0e-19 99.0 71 71.8
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 2.7e-19 98.6 82 62.2
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 3.5e-19 98.2 74 67.6
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 3.5e-19 98.2 90 61.1
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 5.9e-19 97.4 74 66.2
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 5.9e-19 97.4 76 65.8
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 7.7e-19 97.1 84 59.5
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 7.7e-19 97.1 71 69.0
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 7.7e-19 97.1 71 69.0
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 1.0e-18 96.7 91 59.3
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 1.0e-18 96.7 62 75.8
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 1.3e-18 96.3 74 66.2
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 2.2e-18 95.5 74 64.9
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 2.2e-18 95.5 72 63.9
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 2.2e-18 95.5 86 59.3
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 2.2e-18 95.5 82 59.8
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 2.9e-18 95.1 74 66.2
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 2.9e-18 95.1 74 67.6
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 2.9e-18 95.1 69 68.1
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 3.8e-18 94.7 87 57.5
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 5.0e-18 94.4 84 58.3
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 5.0e-18 94.4 85 61.2
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 6.5e-18 94.0 72 63.9
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 6.5e-18 94.0 86 62.8
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 8.5e-18 93.6 71 67.6
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 8.5e-18 93.6 92 59.8
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 8.5e-18 93.6 74 63.5
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 1.1e-17 93.2 74 62.2
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 1.5e-17 92.8 82 57.3
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 1.9e-17 92.4 57 75.4
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 1.9e-17 92.4 92 58.7
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 1.9e-17 92.4 92 58.7
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 1.9e-17 92.4 62 72.6
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 4.2e-17 91.3 87 55.2
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 7.2e-17 90.5 71 60.6
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 9.5e-17 90.1 89 58.4
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 1.6e-16 89.4 86 57.0
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 6.1e-16 87.4 87 52.9
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 8.0e-16 87.0 81 55.6
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 1.8e-15 85.9 95 52.6
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 1.8e-15 85.9 73 61.6
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 4.0e-15 84.7 56 73.2
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 5.2e-15 84.3 70 64.3
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 5.2e-15 84.3 58 70.7
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 6.8e-15 84.0 74 60.8
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 1.2e-14 83.2 75 60.0
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 1.2e-14 83.2 74 58.1
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 2.6e-14 82.0 74 56.8
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 5.7e-14 80.9 94 51.1
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 5.7e-14 80.9 90 55.6
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 9.8e-14 80.1 89 53.9
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 9.8e-14 80.1 74 56.8
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 2.2e-13 79.0 76 53.9
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 2.8e-13 78.6 74 55.4
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 3.7e-13 78.2 88 48.9
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 1.4e-12 76.3 61 60.7
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 1.4e-12 76.3 61 60.7
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 1.8e-12 75.9 74 51.4
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 1.8e-12 75.9 58 65.5
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 5.4e-12 74.3 53 67.9
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 9.2e-12 73.6 82 47.6
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 2.0e-11 72.4 52 63.5
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 2.0e-11 72.4 61 52.5
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 7.8e-11 70.5 85 47.1
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 2.3e-10 68.9 53 58.5
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 5.0e-10 67.8 38 84.2
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 1.1e-09 66.6 61 54.1
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 3.3e-09 65.1 42 71.4
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 1.2e-08 63.2 57 50.9
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 1.6e-08 62.8 37 78.4
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 4.0e-07 58.2 52 57.7
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 6.8e-07 57.4 72 50.0
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 1.5e-06 56.2 40 65.0
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 2.6e-06 55.5 44 56.8


User provided reference genes

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