Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 4.1e-90 334.7 170 100.0
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 1.4e-45 186.8 169 61.5
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 6.6e-40 167.9 182 53.3
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 6.6e-40 167.9 182 53.3
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 8.1e-30 134.4 165 47.3
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 1.4e-21 107.1 64 78.1
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.8e-21 106.7 119 51.3
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.1e-21 105.9 110 53.6
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 5.2e-21 105.1 68 77.9
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 6.9e-21 104.8 114 52.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 1.5e-20 103.6 66 72.7
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.6e-20 102.8 78 60.3
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.6e-20 102.8 73 69.9
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 3.4e-20 102.4 65 75.4
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 4.4e-20 102.1 62 74.2
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 4.4e-20 102.1 98 55.1
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 5.8e-20 101.7 67 70.1
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 5.8e-20 101.7 111 52.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 5.8e-20 101.7 64 75.0
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 5.8e-20 101.7 130 46.2
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 7.6e-20 101.3 80 63.8
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 7.6e-20 101.3 80 63.8
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 7.6e-20 101.3 110 48.2
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 7.6e-20 101.3 67 70.1
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 7.6e-20 101.3 77 64.9
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 9.9e-20 100.9 68 75.0
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.9e-20 100.9 68 75.0
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.9e-20 100.9 68 75.0
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 9.9e-20 100.9 111 52.3
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 9.9e-20 100.9 65 72.3
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 1.3e-19 100.5 77 66.2
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.7e-19 100.1 85 62.4
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.7e-19 100.1 94 50.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.7e-19 100.1 107 52.3
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.7e-19 100.1 76 67.1
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.7e-19 100.1 75 66.7
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 2.2e-19 99.8 106 51.9
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 2.2e-19 99.8 67 68.7
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.8e-19 99.0 100 54.0
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.9e-19 98.6 68 73.5
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 4.9e-19 98.6 67 67.2
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 6.4e-19 98.2 61 72.1
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 6.4e-19 98.2 79 60.8
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 6.4e-19 98.2 67 67.2
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 8.4e-19 97.8 107 48.6
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 1.1e-18 97.4 103 49.5
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.1e-18 97.4 81 56.8
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.1e-18 97.4 61 77.0
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.4e-18 97.1 68 66.2
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.9e-18 96.7 113 47.8
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 2.4e-18 96.3 65 70.8
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 3.2e-18 95.9 69 69.6
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.2e-18 95.9 83 57.8
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 4.2e-18 95.5 108 51.9
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 4.2e-18 95.5 165 41.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 4.2e-18 95.5 73 58.9
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 4.2e-18 95.5 73 58.9
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 4.2e-18 95.5 69 68.1
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 5.4e-18 95.1 68 72.1
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 5.4e-18 95.1 85 58.8
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 7.1e-18 94.7 116 46.6
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 7.1e-18 94.7 94 51.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 7.1e-18 94.7 62 69.4
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 9.3e-18 94.4 65 67.7
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 9.3e-18 94.4 94 52.1
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.2e-17 94.0 74 63.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.2e-17 94.0 116 45.7
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.2e-17 94.0 120 45.8
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.6e-17 93.6 102 51.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.6e-17 93.6 111 46.8
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.6e-17 93.6 111 46.8
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.6e-17 93.6 74 63.5
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.6e-17 93.6 83 56.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.1e-17 93.2 91 51.6
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.1e-17 93.2 102 50.0
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 2.1e-17 93.2 77 54.5
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 2.7e-17 92.8 88 51.1
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.7e-17 92.8 64 64.1
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.7e-17 92.8 67 65.7
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 3.5e-17 92.4 83 55.4
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 4.6e-17 92.0 85 55.3
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 4.6e-17 92.0 62 69.4
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 6.0e-17 91.7 65 66.2
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 6.0e-17 91.7 73 58.9
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 6.0e-17 91.7 78 57.7
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 7.8e-17 91.3 65 66.2
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 7.8e-17 91.3 82 56.1
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.0e-16 90.9 64 65.6
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 1.3e-16 90.5 123 42.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.3e-16 90.5 117 46.2
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 1.3e-16 90.5 68 63.2
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.3e-16 90.5 68 63.2
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.3e-16 90.5 68 63.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 3.0e-16 89.4 77 53.2
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 3.0e-16 89.4 126 43.7
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 5.1e-16 88.6 68 61.8
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 6.6e-16 88.2 94 48.9
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 2.5e-15 86.3 68 64.7
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 3.3e-15 85.9 86 48.8
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 9.6e-15 84.3 62 62.9
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.6e-14 83.6 73 57.5
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.8e-13 80.1 64 59.4
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 3.1e-13 79.3 63 57.1
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.4e-10 70.5 77 48.1
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.9e-10 70.1 62 61.3
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 7.1e-10 68.2 72 54.2
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 9.3e-10 67.8 67 49.3


User provided reference genes

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