Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 3.9e-27 124.0 61 100.0
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.5e-21 104.8 57 84.2
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 5.5e-21 103.6 61 82.0
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 7.2e-21 103.2 56 83.9
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 7.2e-21 103.2 56 83.9
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 7.2e-21 103.2 56 83.9
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 9.3e-21 102.8 58 81.0
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 2.7e-20 101.3 61 83.6
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 2.7e-20 101.3 58 82.8
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 7.9e-20 99.8 60 75.0
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 7.9e-20 99.8 54 81.5
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 7.9e-20 99.8 55 85.5
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 1.0e-19 99.4 50 90.0
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 1.3e-19 99.0 59 79.7
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 1.8e-19 98.6 51 90.2
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 1.8e-19 98.6 55 85.5
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 2.3e-19 98.2 52 88.5
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 2.3e-19 98.2 53 81.1
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 2.3e-19 98.2 53 81.1
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 2.3e-19 98.2 53 81.1
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 2.3e-19 98.2 53 81.1
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 2.3e-19 98.2 56 82.1
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 2.3e-19 98.2 56 82.1
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 3.0e-19 97.8 53 81.1
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 3.0e-19 97.8 59 76.3
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 3.9e-19 97.4 55 83.6
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 5.1e-19 97.1 55 81.8
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 5.1e-19 97.1 59 78.0
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 5.1e-19 97.1 55 81.8
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 5.1e-19 97.1 53 79.2
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 6.7e-19 96.7 53 79.2
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 8.7e-19 96.3 51 86.3
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.1e-18 95.9 61 75.4
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 1.1e-18 95.9 51 88.2
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 1.5e-18 95.5 53 79.2
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 1.9e-18 95.1 52 84.6
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 2.5e-18 94.7 55 81.8
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 2.5e-18 94.7 55 80.0
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 2.5e-18 94.7 53 81.1
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 3.3e-18 94.4 53 77.4
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 3.3e-18 94.4 52 84.6
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 4.3e-18 94.0 53 77.4
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 4.3e-18 94.0 60 68.3
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 4.3e-18 94.0 52 84.6
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 4.3e-18 94.0 53 81.1
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 4.3e-18 94.0 51 82.4
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 5.7e-18 93.6 53 81.1
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 5.7e-18 93.6 51 84.3
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 7.4e-18 93.2 53 79.2
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 7.4e-18 93.2 51 80.4
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 7.4e-18 93.2 52 82.7
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.3e-17 92.4 61 72.1
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.3e-17 92.4 61 72.1
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 1.6e-17 92.0 52 80.8
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 2.2e-17 91.7 56 73.2
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 2.8e-17 91.3 53 75.5
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 2.8e-17 91.3 51 80.4
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 3.7e-17 90.9 56 76.8
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 4.8e-17 90.5 52 76.9
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 8.2e-17 89.7 51 80.4
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 1.1e-16 89.4 53 71.7
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 1.8e-16 88.6 51 78.4
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 3.1e-16 87.8 53 73.6
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 3.1e-16 87.8 51 76.5
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 4.1e-16 87.4 58 70.7
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 5.3e-16 87.0 41 95.1
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 9.0e-16 86.3 53 75.5
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 1.5e-15 85.5 49 77.6
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 1.5e-15 85.5 51 76.5
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.0e-15 85.1 46 82.6
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 2.0e-15 85.1 41 92.7
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 2.0e-15 85.1 41 92.7
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 2.0e-15 85.1 51 74.5
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 2.0e-15 85.1 41 90.2
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 2.6e-15 84.7 54 77.8
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 3.4e-15 84.3 41 90.2
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 7.7e-15 83.2 47 74.5
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 7.7e-15 83.2 53 75.5
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.0e-14 82.8 41 90.2
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.7e-14 82.0 42 85.7
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 1.4e-13 79.0 44 79.5
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 1.9e-13 78.6 41 82.9
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 5.5e-13 77.0 41 82.9
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 7.2e-13 76.6 42 78.6
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 3.6e-12 74.3 39 84.6
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 7.9e-12 73.2 40 77.5
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 7.9e-12 73.2 40 77.5
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 1.1e-10 69.3 45 64.4
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 4.4e-10 67.4 34 91.2
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 2.8e-09 64.7 34 85.3
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.4e-08 62.4 53 64.2
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 1.4e-08 62.4 46 58.7
CBR_g21252 Chara braunii HOM05D007733 ORTHO05D009786 2.0e-07 58.5 52 51.9


User provided reference genes

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