Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01523 Erythranthe guttata HOM05D004963 ORTHO05D006638 0.0e+00 1807.3 921 100.0
Migut.J01521 Erythranthe guttata HOM05D004963 ORTHO05D006638 0.0e+00 1622.4 948 87.2
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 0.0e+00 1152.5 978 64.7
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 9.9e-308 1060.1 974 59.4
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 5.5e-298 1027.7 954 59.1
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 6.1e-289 997.7 979 55.9
Oeu046826.1 Olea europaea HOM05D004963 ORTHO05D006638 1.3e-288 996.5 957 56.2
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 1.1e-271 940.3 955 53.3
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 3.5e-268 928.7 959 51.9
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 1.6e-265 919.8 952 52.9
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 1.8e-264 916.4 951 51.4
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 3.3e-263 912.1 963 51.6
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 1.7e-262 909.8 951 51.7
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 2.2e-262 909.4 954 52.2
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 3.1e-261 905.6 956 50.5
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 1.6e-260 903.3 956 51.3
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 4.5e-260 901.7 968 50.6
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 7.7e-260 901.0 961 51.2
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 2.9e-259 899.0 952 51.6
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 5.0e-259 898.3 964 50.5
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 2.5e-258 896.0 959 51.2
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 2.1e-257 892.9 953 51.9
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 3.6e-257 892.1 949 50.9
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 4.7e-257 891.7 976 50.0
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 6.8e-256 887.9 956 50.3
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 4.4e-255 885.2 960 51.4
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 4.4e-255 885.2 957 50.7
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 1.3e-254 883.6 949 50.7
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 1.3e-254 883.6 955 50.7
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 2.2e-254 882.9 949 50.7
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 1.1e-253 880.6 959 50.6
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 4.5e-252 875.2 953 49.0
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 5.9e-252 874.8 955 49.2
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 7.7e-252 874.4 956 49.7
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 2.2e-251 872.8 973 49.3
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 6.5e-251 871.3 959 49.2
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 1.9e-250 869.8 952 49.9
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 4.2e-250 868.6 952 49.9
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 4.2e-250 868.6 970 48.8
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 3.0e-248 862.4 960 49.5
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 3.0e-248 862.4 952 50.0
Ciclev10018026m.g Citrus clementina HOM05D004963 ORTHO05D006638 5.2e-248 861.7 956 48.5
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 5.2e-248 861.7 953 49.7
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 3.7e-246 855.5 952 48.9
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 6.3e-246 854.7 955 49.5
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 1.1e-245 854.0 955 49.4
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 4.1e-245 852.0 955 49.5
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 5.4e-245 851.7 959 48.9
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 3.5e-244 849.0 961 48.1
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 1.7e-243 846.7 1075 46.1
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 1.5e-242 843.6 950 47.5
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 4.4e-239 832.0 956 49.1
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 1.3e-238 830.5 965 47.5
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 5.4e-237 825.1 953 47.8
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 9.2e-237 824.3 963 48.1
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 2.7e-236 822.8 957 48.1
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 2.7e-236 822.8 957 48.1
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 3.5e-236 822.4 955 48.4
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 4.6e-236 822.0 957 48.0
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 5.9e-236 821.6 966 47.1
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 7.8e-236 821.2 955 48.2
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 7.8e-236 821.2 955 48.2
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 9.5e-234 814.3 954 47.2
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 1.6e-233 813.5 954 48.5
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 2.8e-233 812.8 981 46.1
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 3.6e-233 812.4 956 47.7
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 8.0e-233 811.2 952 47.6
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 8.0e-233 811.2 1127 42.5
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 1.8e-232 810.1 951 47.3
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 8.9e-232 807.7 960 46.8
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 6.4e-230 801.6 977 46.6
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 3.2e-229 799.3 960 46.1
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 2.7e-228 796.2 973 47.1
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 4.6e-228 795.4 914 46.9
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 2.3e-227 793.1 959 46.6
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 5.8e-223 778.5 920 48.9
ClCG10G013880 Citrullus lanatus HOM05D004963 ORTHO05D006638 8.3e-222 774.6 961 46.0
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 2.3e-211 740.0 977 44.4
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 5.8e-207 725.3 951 45.4
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 4.5e-199 699.1 765 49.9
Gorai.006G033800 Gossypium raimondii HOM05D004963 ORTHO05D006638 1.3e-195 687.6 728 51.5
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 8.1e-193 678.3 824 47.6
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 3.4e-191 672.9 842 45.7
SEGI_19244 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 5.6e-186 655.6 993 40.3
Eucgr.J02245 Eucalyptus grandis HOM05D004963 ORTHO05D006638 3.8e-174 616.3 775 44.4
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 1.2e-164 584.7 991 37.1
CDE07G0232 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 1.6e-164 584.3 951 38.9
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 1.1e-154 551.6 989 36.4
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 8.2e-153 545.4 966 35.7
unitig_748.g6984 Utricularia gibba HOM05D004963 ORTHO05D006638 4.2e-149 533.1 480 58.3
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 3.3e-146 523.5 831 38.4
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 1.2e-127 461.8 1043 32.2
DCAR_003836 Daucus carota HOM05D004963 ORTHO05D006638 2.0e-122 444.5 540 46.3
CARHR149540 Cardamine hirsuta HOM05D004963 ORTHO05D006638 1.6e-119 434.9 525 46.9
MBI06_g10159_MAGBIO Magnolia biondii HOM05D004963 ORTHO05D006638 3.2e-104 384.0 382 52.4
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 9.5e-101 372.5 289 63.7
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 1.2e-92 345.5 440 45.9
Gohir.D09G029000 Gossypium hirsutum HOM05D004963 ORTHO05D006638 2.2e-81 308.1 432 43.1
Os09g0565450 Oryza sativa ssp. japonica HOM05D004963 ORTHO05D006638 1.2e-71 275.8 259 53.7
Cpa.g.sc108.68 Carica papaya HOM05D004963 ORTHO05D006638 2.5e-69 268.1 217 63.1
Carub.0007s0778 Capsella rubella HOM05D004963 ORTHO05D006638 1.8e-62 245.4 316 46.2
VMungo1383G2035 Vigna mungo HOM05D004963 ORTHO05D006638 1.4e-30 139.4 235 34.9
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 5.2e-22 110.9 93 63.4
C06p05790 Brassica napus HOM05D004963 ORTHO05D021908 2.4e-19 102.1 107 43.0
C06p05800 Brassica napus HOM05D004963 ORTHO05D021908 4.5e-18 97.8 106 44.3
BcaC08g43235 Brassica carinata HOM05D004963 ORTHO05D021908 3.6e-15 88.2 102 42.2
Thhalv10017260m.g Eutrema salsugineum HOM05D015603 ORTHO05D017573 3.7e-12 78.2 79 46.8
Thhalv10017271m.g Eutrema salsugineum HOM05D015603 ORTHO05D017573 3.7e-12 78.2 79 46.8
Thhalv10017254m.g Eutrema salsugineum HOM05D015603 ORTHO05D017573 8.3e-12 77.0 79 45.6
Zm00001eb027130 Zea mays HOM05D004963 ORTHO05D006638 1.0e-09 70.1 200 25.5
A02p14020 Brassica napus HOM05D015603 ORTHO05D017573 1.3e-09 69.7 155 31.0
C02p22570 Brassica napus HOM05D015603 ORTHO05D017573 2.5e-08 65.5 156 30.8
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 2.1e-07 62.4 142 33.8
Psat2g110360 Pisum sativum HOM05D002628 ORTHO05D002785 2.1e-07 62.4 256 27.0
Ca_06838_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 8.9e-06 57.0 88 37.5


User provided reference genes

Program Settings