Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01428 Erythranthe guttata HOM05D015143 ORTHO05D004696 2.4e-151 538.9 289 100.0
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 3.6e-62 242.7 315 54.0
Migut.J01429 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.3e-59 234.2 318 52.5
Migut.J01431 Erythranthe guttata HOM05D015143 ORTHO05D004696 3.2e-55 219.5 379 46.7
Migut.J01427 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.2e-41 174.5 310 45.2
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 1.7e-24 117.5 315 33.7
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 1.1e-23 114.8 333 32.7
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 5.6e-23 112.5 325 35.1
SalBow6G3434 Salvia bowleyana HOM05D015143 ORTHO05D004696 3.1e-21 106.7 289 34.3
SalBow6G6841 Salvia bowleyana HOM05D015143 ORTHO05D004696 1.2e-20 104.8 289 34.3
SalBow6G2608 Salvia bowleyana HOM05D050058 ORTHO05D004696 2.9e-19 100.1 294 35.0
SalBow6G5998 Salvia bowleyana HOM05D050058 ORTHO05D004696 1.1e-18 98.2 294 34.7
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 4.1e-18 96.3 319 32.0
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 3.5e-17 93.2 312 31.4
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 3.5e-17 93.2 312 31.4
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 7.8e-17 92.0 302 32.5
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.7e-16 90.9 303 30.4
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 6.6e-16 89.0 227 37.4
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 8.6e-16 88.6 305 30.2
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 1.9e-15 87.4 309 29.1
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 4.3e-15 86.3 297 32.0
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 1.2e-14 84.7 306 32.0
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 1.2e-14 84.7 319 30.4
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 2.8e-14 83.6 312 29.8
SalBow6G0373 Salvia bowleyana HOM05D015143 ORTHO05D004696 6.2e-14 82.4 292 30.1
SalBow6G0923 Salvia bowleyana HOM05D015143 ORTHO05D004696 6.2e-14 82.4 292 30.1
PGSC0003DMG400034810 Solanum tuberosum HOM05D004960 ORTHO05D004696 1.4e-13 81.3 231 33.8
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 2.4e-13 80.5 326 27.3
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 2.4e-13 80.5 318 30.2
HanXRQChr03g0068481 Helianthus annuus HOM05D004960 ORTHO05D004696 4.0e-13 79.7 297 28.6
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.0e-13 79.7 298 31.2
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 8.9e-13 78.6 315 32.4
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.5e-12 77.8 338 28.7
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 1.5e-12 77.8 303 28.1
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 2.6e-12 77.0 310 29.7
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.6e-12 77.0 297 30.3
PGR084G0002 Punica granatum HOM05D004960 ORTHO05D004696 2.6e-12 77.0 315 29.2
PGR142G0218 Punica granatum HOM05D004960 ORTHO05D004696 2.6e-12 77.0 315 29.2
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 3.4e-12 76.6 316 31.0
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 3.4e-12 76.6 308 28.9
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 4.4e-12 76.3 295 29.2
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 2.2e-11 73.9 314 30.3
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 2.2e-11 73.9 302 25.2
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 3.8e-11 73.2 306 28.8
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.8e-11 73.2 287 27.9
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 4.9e-11 72.8 314 28.3
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 4.9e-11 72.8 312 27.9
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 8.4e-11 72.0 311 29.6
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.4e-10 71.2 299 30.1
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 1.9e-10 70.9 315 27.6
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 4.2e-10 69.7 310 26.5
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 5.4e-10 69.3 281 29.5
SalBow6G0476 Salvia bowleyana HOM05D004960 ORTHO05D004696 5.4e-10 69.3 308 25.6
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 7.1e-10 68.9 307 30.6
HanXRQChr03g0068521 Helianthus annuus HOM05D004960 ORTHO05D004696 7.1e-10 68.9 267 30.3
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 7.1e-10 68.9 294 28.9
Oeu037995.1 Olea europaea HOM05D004960 ORTHO05D004696 7.1e-10 68.9 158 38.0
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 9.3e-10 68.6 317 29.7
Dinv42772 Davidia involucrata HOM05D004960 ORTHO05D004696 1.2e-09 68.2 200 32.0
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.2e-09 68.2 293 27.6
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.2e-09 68.2 304 29.9
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 3.5e-09 66.6 324 28.4
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 4.6e-09 66.2 289 29.8
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.6e-09 66.2 296 28.4
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.6e-09 66.2 285 30.2
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 6.0e-09 65.9 308 30.2
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 6.0e-09 65.9 302 27.8
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 6.0e-09 65.9 304 29.9
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.0e-09 65.9 283 28.6
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 1.7e-08 64.3 224 32.1
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 3.0e-08 63.5 290 29.3
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 5.1e-08 62.8 291 28.9
BcaC02g09087 Brassica carinata HOM05D004960 ORTHO05D004696 6.6e-08 62.4 313 26.5
BraA04t16256Z Brassica rapa HOM05D004960 ORTHO05D004696 6.6e-08 62.4 304 26.0
A04p05570 Brassica napus HOM05D004960 ORTHO05D004696 8.7e-08 62.0 290 26.2
Cpa.g.sc75.10 Carica papaya HOM05D004960 ORTHO05D004696 1.1e-07 61.6 230 31.3
C04p38300 Brassica napus HOM05D004960 ORTHO05D004696 1.9e-07 60.8 316 26.3
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 1.9e-07 60.8 293 27.6
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 3.3e-07 60.1 314 27.7
Migut.K00270 Erythranthe guttata HOM05D004960 ORTHO05D004696 4.3e-07 59.7 256 29.7
CSS0021222 Camellia sinensis var. sinensis HOM05D001062 ORTHO05D000884 5.6e-07 59.3 311 26.4
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 5.6e-07 59.3 232 30.6
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 5.6e-07 59.3 232 30.6
Lsat_1_v5_gn_6_97521 Lactuca sativa HOM05D001062 ORTHO05D000884 5.6e-07 59.3 310 27.1
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 9.6e-07 58.5 307 29.6
COL.COLO4_35751 Corchorus olitorius HOM05D001062 ORTHO05D000884 9.6e-07 58.5 325 27.7
Duzib116G0744 Durio zibethinus HOM05D001062 ORTHO05D000884 9.6e-07 58.5 303 26.1
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 9.6e-07 58.5 312 26.6
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 1.3e-06 58.2 295 29.5
CSS0049252 Camellia sinensis var. sinensis HOM05D001062 ORTHO05D000884 1.6e-06 57.8 303 25.7
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 2.8e-06 57.0 223 30.5
Lalb_Chr08g0240871 Lupinus albus HOM05D001062 ORTHO05D000884 2.8e-06 57.0 233 31.8
Pp3c6_23080 Physcomitrium patens HOM05D001062 ORTHO05D000884 2.8e-06 57.0 223 33.2
RcHm_v2.0_Chr6g0277721 Rosa chinensis HOM05D001062 ORTHO05D000884 2.8e-06 57.0 232 27.2
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 3.6e-06 56.6 223 30.0
TPR.G35970 Trifolium pratense HOM05D001062 ORTHO05D000884 3.6e-06 56.6 310 25.8
CDE04G1275 Ceratophyllum demersum HOM05D000122 ORTHO05D000139 4.8e-06 56.2 298 23.5
Cpa.g.c29666.2 Carica papaya HOM05D004960 ORTHO05D004696 6.2e-06 55.8 226 30.5
SalBow6G5926 Salvia bowleyana HOM05D015143 ORTHO05D004696 6.2e-06 55.8 143 37.1


User provided reference genes

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