Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01427 Erythranthe guttata HOM05D015143 ORTHO05D004696 7.8e-164 580.5 312 100.0
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 8.6e-62 241.5 321 50.8
Migut.J01429 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.6e-55 220.7 327 49.2
Migut.J01431 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.2e-52 211.1 386 42.7
Migut.J01428 Erythranthe guttata HOM05D015143 ORTHO05D004696 4.9e-41 172.6 310 45.2
SalBow6G6841 Salvia bowleyana HOM05D015143 ORTHO05D004696 2.1e-39 167.2 310 40.3
SalBow6G3434 Salvia bowleyana HOM05D015143 ORTHO05D004696 5.6e-37 159.1 310 40.0
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 6.4e-25 119.0 324 35.8
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 1.1e-24 118.2 329 34.0
SalBow6G0373 Salvia bowleyana HOM05D015143 ORTHO05D004696 4.6e-23 112.8 306 31.7
SalBow6G0923 Salvia bowleyana HOM05D015143 ORTHO05D004696 7.9e-23 112.1 306 31.7
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 1.3e-22 111.3 319 32.3
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.8e-22 110.9 333 33.9
SalBow6G2608 Salvia bowleyana HOM05D050058 ORTHO05D004696 8.7e-22 108.6 301 36.5
SalBow6G5998 Salvia bowleyana HOM05D050058 ORTHO05D004696 4.3e-21 106.3 301 36.2
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 7.4e-21 105.5 332 33.4
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 8.2e-20 102.1 321 35.5
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 2.4e-19 100.5 243 37.4
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 5.3e-19 99.4 331 32.0
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 5.3e-19 99.4 331 32.0
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 1.0e-17 95.1 321 31.8
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.9e-17 93.6 308 31.5
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 3.2e-16 90.1 315 29.5
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 7.1e-16 89.0 312 32.4
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 9.3e-16 88.6 315 33.3
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 1.2e-15 88.2 339 28.0
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 3.5e-15 86.7 324 27.8
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 4.6e-15 86.3 312 31.1
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 6.0e-15 85.9 320 31.2
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 3.0e-14 83.6 293 31.4
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 3.0e-14 83.6 311 28.9
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 5.1e-14 82.8 330 33.6
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 5.1e-14 82.8 334 30.2
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.9e-13 80.9 327 33.9
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 2.5e-13 80.5 306 34.0
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 2.5e-13 80.5 319 31.7
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 3.3e-13 80.1 320 30.9
SalBow6G5926 Salvia bowleyana HOM05D015143 ORTHO05D004696 5.7e-13 79.3 149 41.6
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 5.7e-13 79.3 329 29.2
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 7.4e-13 79.0 320 28.8
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 9.7e-13 78.6 328 31.1
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.3e-12 78.2 323 30.0
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 1.3e-12 78.2 313 30.4
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 1.6e-12 77.8 329 30.4
Cpa.g.c29666.2 Carica papaya HOM05D004960 ORTHO05D004696 2.2e-12 77.4 320 33.4
Dinv42772 Davidia involucrata HOM05D004960 ORTHO05D004696 8.2e-12 75.5 366 29.5
HanXRQChr03g0068481 Helianthus annuus HOM05D004960 ORTHO05D004696 8.2e-12 75.5 322 29.5
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.4e-11 74.7 308 29.5
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 1.8e-11 74.3 318 30.2
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.8e-11 74.3 303 30.7
Cpa.g.sc75.10 Carica papaya HOM05D004960 ORTHO05D004696 2.4e-11 73.9 244 34.0
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 2.4e-11 73.9 314 29.6
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 4.1e-11 73.2 322 25.5
ECA240G0411 Erigeron canadensis HOM05D004960 ORTHO05D004696 4.1e-11 73.2 318 29.9
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 5.3e-11 72.8 311 27.7
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 5.3e-11 72.8 317 29.0
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 2.6e-10 70.5 323 29.1
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 5.9e-10 69.3 331 29.6
SalBow6G0476 Salvia bowleyana HOM05D004960 ORTHO05D004696 7.6e-10 68.9 310 30.0
Migut.K00270 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.0e-09 68.6 311 30.2
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.3e-09 68.2 299 28.1
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.7e-09 67.8 299 30.1
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 2.2e-09 67.4 304 28.3
Oeu037995.1 Olea europaea HOM05D004960 ORTHO05D004696 5.0e-09 66.2 260 32.3
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 5.0e-09 66.2 315 29.5
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 5.0e-09 66.2 299 29.1
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 6.5e-09 65.9 318 30.5
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 6.5e-09 65.9 287 25.8
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 1.1e-08 65.1 314 26.4
PGSC0003DMG400034810 Solanum tuberosum HOM05D004960 ORTHO05D004696 3.2e-08 63.5 253 29.6
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 3.2e-08 63.5 227 32.2
HanXRQChr03g0068521 Helianthus annuus HOM05D004960 ORTHO05D004696 4.2e-08 63.2 310 27.1
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 9.3e-08 62.0 308 28.9
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 9.3e-08 62.0 308 28.9
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 9.3e-08 62.0 299 26.1
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.2e-07 61.6 306 26.1
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 2.1e-07 60.8 301 24.6
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 2.7e-07 60.5 306 30.4
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 4.6e-07 59.7 304 26.0
PGR084G0002 Punica granatum HOM05D004960 ORTHO05D004696 6.1e-07 59.3 318 28.3
PGR142G0218 Punica granatum HOM05D004960 ORTHO05D004696 6.1e-07 59.3 318 28.3
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 7.9e-07 58.9 301 24.3
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 1.0e-06 58.5 315 27.6
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 3.0e-06 57.0 285 30.2
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 3.0e-06 57.0 301 28.9
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 3.9e-06 56.6 312 26.6
HanXRQChr03g0074171 Helianthus annuus HOM05D012567 ORTHO05D004696 5.1e-06 56.2 301 24.9
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 8.7e-06 55.5 218 29.8
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 8.7e-06 55.5 249 31.7


User provided reference genes

Program Settings