Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 3.8e-51 204.5 101 100.0
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 3.8e-51 204.5 101 100.0
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 2.7e-49 198.4 101 96.0
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 6.0e-49 197.2 101 96.0
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 7.9e-49 196.8 101 96.0
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 1.0e-48 196.4 101 94.1
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 3.9e-48 194.5 101 95.0
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 94.1
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 94.1
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 6.7e-48 193.7 101 95.0
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 6.7e-48 193.7 101 95.0
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 6.7e-48 193.7 101 95.0
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 1.1e-47 193.0 101 92.1
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-47 192.2 101 93.1
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 3.3e-47 191.4 101 91.1
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 4.3e-47 191.0 101 93.1
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 5.6e-47 190.7 101 93.1
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 9.6e-47 189.9 101 91.1
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 9.6e-47 189.9 101 91.1
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 9.6e-47 189.9 99 96.0
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 9.6e-47 189.9 99 96.0
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 9.6e-47 189.9 99 96.0
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 92.1
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 4.8e-46 187.6 101 90.1
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 4.8e-46 187.6 101 90.1
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 4.8e-46 187.6 101 90.1
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-46 187.6 101 90.1
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 6.2e-46 187.2 101 92.1
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.8e-45 185.7 101 91.1
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 4.0e-45 184.5 101 90.1
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.5e-44 181.0 101 89.1
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 1.7e-43 179.1 101 88.1
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 4.9e-43 177.6 99 87.9
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 6.5e-43 177.2 101 88.1
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 1.9e-42 175.6 88 95.5
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 3.2e-42 174.9 97 86.6
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 7.1e-42 173.7 98 88.8
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 1.6e-41 172.6 94 89.4
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 2.1e-41 172.2 101 85.1
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.7e-41 171.8 101 84.2
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 6.0e-41 170.6 101 83.2
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 1.0e-40 169.9 101 87.1
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 1.3e-40 169.5 101 82.2
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 1.3e-40 169.5 101 85.1
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 1.3e-40 169.5 99 85.9
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 1.1e-39 166.4 101 83.2
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 1.1e-39 166.4 86 96.5
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.5e-39 166.0 86 96.5
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 5.7e-39 164.1 100 84.0
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.1e-38 162.2 86 94.2
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 1.5e-36 156.0 101 76.2
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 5.0e-35 151.0 93 81.7
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 3.2e-34 148.3 74 94.6
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 1.2e-33 146.4 70 95.7
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 6.1e-33 144.1 79 92.4
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 2.3e-32 142.1 94 73.4
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 8.7e-32 140.2 76 92.1
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 9.7e-31 136.7 74 89.2
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 7.7e-28 127.1 97 69.1
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 3.8e-27 124.8 99 60.6
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 8.5e-27 123.6 72 86.1
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 1.4e-26 122.9 56 100.0
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 1.3e-22 109.8 64 89.1
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.3e-22 109.8 62 91.9
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 2.6e-20 102.1 56 85.7
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 5.9e-20 100.9 57 91.2
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 7.7e-20 100.5 48 93.8
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 7.2e-18 94.0 91 62.6
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 2.1e-17 92.4 48 89.6
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 8.2e-14 80.5 53 73.6
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 3.1e-13 78.6 51 84.3
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 2.6e-12 75.5 51 78.4
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 1.7e-11 72.8 97 51.5
Sopen10g013070 Solanum pennellii HOM05D000388 ORTHO05D009843 2.9e-11 72.0 33 93.9
BolC9t56932H Brassica oleracea HOM05D000388 ORTHO05D009843 3.0e-08 62.0 27 100.0
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 1.5e-07 59.7 92 44.6
arahy.Tifrunner.gnm1.ann1.EPB7VR Arachis hypogaea HOM05D000176 ORTHO05D000106 3.3e-07 58.5 27 92.6
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 1.7e-06 56.2 91 39.6
Mapoly0991s0001 Marchantia polymorpha HOM05D007099 ORTHO05D009081 2.2e-06 55.8 63 41.3
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 2.2e-06 55.8 92 40.2
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 2.2e-06 55.8 92 40.2
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 2.8e-06 55.5 90 38.9
CsaV3_2G032930 Cucumis sativus L. HOM05D007099 ORTHO05D009081 2.8e-06 55.5 91 39.6
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 3.7e-06 55.1 95 43.2
AUR62006089 Chenopodium quinoa HOM05D007099 ORTHO05D009081 3.7e-06 55.1 91 41.8
AUR62019404 Chenopodium quinoa HOM05D007099 ORTHO05D009081 3.7e-06 55.1 91 41.8
HanXRQChr00c0586g0576301 Helianthus annuus HOM05D000388 ORTHO05D009843 4.8e-06 54.7 83 47.0
Manes.15G073400 Manihot esculenta HOM05D007099 ORTHO05D009081 6.3e-06 54.3 56 46.4
MELO3C019879.2 Cucumis melo HOM05D007099 ORTHO05D009081 8.2e-06 53.9 91 38.5


User provided reference genes

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