Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 5.0e-117 424.5 219 100.0
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 2.0e-89 332.8 224 77.2
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 5.6e-84 314.7 231 70.1
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.4e-82 310.1 224 69.6
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 2.4e-82 309.3 217 74.2
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 9.9e-81 303.9 230 66.5
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.3e-80 303.5 231 67.5
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.4e-79 300.1 231 67.1
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 2.4e-79 299.3 225 65.8
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 4.2e-79 298.5 225 65.3
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 2.1e-78 296.2 226 67.3
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 7.9e-78 294.3 228 65.8
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 1.0e-77 293.9 231 64.1
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 3.0e-77 292.4 232 65.9
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 3.9e-77 292.0 226 65.0
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 5.1e-77 291.6 228 64.9
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 6.6e-77 291.2 230 64.8
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 1.5e-76 290.0 226 64.2
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 1.5e-76 290.0 219 67.6
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 1.5e-76 290.0 219 67.6
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 1.5e-76 290.0 224 63.4
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 5.6e-76 288.1 228 64.5
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 5.6e-76 288.1 231 62.8
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 7.4e-76 287.7 224 65.2
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 9.6e-76 287.3 231 63.6
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 9.6e-76 287.3 231 63.6
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 3.6e-75 285.4 227 65.6
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 3.6e-75 285.4 224 63.4
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 4.8e-75 285.0 227 65.6
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 6.2e-75 284.6 212 69.8
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 8.1e-75 284.3 227 64.8
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 8.1e-75 284.3 227 64.3
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 1.1e-74 283.9 228 63.2
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 1.8e-74 283.1 227 64.3
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 4.0e-74 282.0 237 63.3
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.2e-73 280.4 227 63.9
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.2e-73 280.4 235 61.7
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 4.5e-73 278.5 220 63.2
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 7.6e-73 277.7 228 64.0
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 9.9e-73 277.3 224 64.3
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 9.9e-73 277.3 231 61.5
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 9.9e-73 277.3 221 65.6
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 9.9e-73 277.3 225 64.9
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 9.9e-73 277.3 232 61.2
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.3e-72 276.9 229 61.6
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 1.3e-72 276.9 228 62.7
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 4.9e-72 275.0 230 61.7
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 6.4e-72 274.6 219 63.5
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 8.4e-72 274.2 219 64.8
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 8.4e-72 274.2 221 65.2
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 1.4e-71 273.5 229 63.3
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 4.2e-71 271.9 224 63.4
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 5.5e-71 271.6 226 61.9
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 9.3e-71 270.8 227 63.0
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 9.3e-71 270.8 233 61.8
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 1.6e-70 270.0 230 58.7
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 3.5e-70 268.9 219 63.0
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 3.5e-70 268.9 227 62.6
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 1.0e-69 267.3 220 62.7
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.0e-69 267.3 230 58.7
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 1.3e-69 266.9 231 60.6
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 1.8e-69 266.5 225 60.4
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 3.9e-69 265.4 230 59.1
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 1.9e-68 263.1 227 59.0
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 1.9e-68 263.1 214 65.0
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 3.3e-68 262.3 220 62.7
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 3.3e-68 262.3 227 59.0
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 5.6e-68 261.5 213 65.7
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 9.6e-68 260.8 216 62.5
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.6e-67 260.0 224 60.3
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 2.1e-67 259.6 220 63.2
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 2.8e-67 259.2 221 62.0
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 4.8e-67 258.5 226 61.9
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 8.1e-67 257.7 224 59.4
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 5.3e-66 255.0 223 59.2
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 1.2e-65 253.8 223 59.2
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.3e-64 250.4 220 60.5
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.2e-64 249.6 281 51.6
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 6.5e-64 248.1 237 56.1
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.1e-63 247.3 219 60.7
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 4.2e-63 245.4 224 58.9
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 7.1e-63 244.6 219 56.2
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 2.7e-62 242.7 219 55.7
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 6.0e-62 241.5 228 59.2
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 6.7e-61 238.0 246 54.9
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.1e-60 237.3 220 57.3
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 2.5e-60 236.1 219 55.7
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 4.3e-60 235.3 227 56.8
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.1e-59 233.0 222 54.1
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.0e-56 224.2 231 53.2
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.1e-55 220.7 211 53.6
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 4.2e-55 218.8 217 57.1
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 5.5e-55 218.4 212 56.1
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 7.2e-55 218.0 245 49.4
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 6.1e-54 214.9 208 54.3
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 3.3e-52 209.1 226 49.1
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 2.2e-51 206.5 233 48.9
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.2e-51 206.5 230 47.0
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 1.4e-50 203.8 233 47.6
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 5.3e-50 201.8 220 49.5
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 6.9e-50 201.4 219 50.7
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.4e-49 199.1 191 60.2
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.8e-48 195.7 222 50.9
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 5.0e-48 195.3 218 45.4
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 6.5e-48 194.9 165 62.4
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 1.6e-46 190.3 206 51.5
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 8.8e-45 184.5 189 52.9
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.4e-42 177.2 157 57.3
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.3e-40 170.6 159 55.3
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-33 146.0 268 34.3
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 1.7e-32 143.7 110 66.4
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 5.0e-32 142.1 97 68.0
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 2.0e-28 130.2 135 54.8
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.4e-28 129.0 183 44.3
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 9.7e-28 127.9 213 37.1
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 8.2e-27 124.8 89 65.2
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 8.2e-27 124.8 274 32.8
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 7.0e-26 121.7 104 59.6
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.9e-24 116.3 128 50.0
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 6.5e-24 115.2 74 79.7
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 3.4e-20 102.8 73 69.9
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 2.2e-19 100.1 156 41.0
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.2e-19 100.1 156 41.0
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 2.8e-19 99.8 91 56.0
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 3.7e-19 99.4 91 54.9
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 2.4e-18 96.7 91 53.8
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 2.4e-18 96.7 196 34.2
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 2.0e-17 93.6 91 52.7
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 2.1e-14 83.6 85 52.9
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.6e-12 76.6 77 48.1
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.4e-12 76.3 61 59.0
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 2.2e-11 73.6 72 55.6
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 9.2e-10 68.2 54 63.0
SGA_v2.0_scaffold100G29569 Striga asiatica HOM05D005809 ORTHO05D007259 5.6e-07 58.9 81 46.9


User provided reference genes

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