Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01282 Erythranthe guttata HOM05D009630 ORTHO05D001390 3.2e-64 248.1 110 100.0
Migut.J01298 Erythranthe guttata HOM05D009630 ORTHO05D001390 3.3e-24 115.2 116 49.1
Migut.J01283 Erythranthe guttata HOM05D009630 ORTHO05D001390 6.4e-20 100.9 109 46.8
Actinidia34998 Actinidia chinensis HOM05D000243 ORTHO05D001390 1.5e-13 79.7 112 41.1
Migut.J01291 Erythranthe guttata HOM05D009630 ORTHO05D001390 9.9e-13 77.0 77 49.4
Migut.J01289 Erythranthe guttata HOM05D009630 ORTHO05D001390 1.1e-11 73.6 89 43.8
SGA_v2.0_scaffold229G43353 Striga asiatica HOM05D009630 ORTHO05D018137 2.1e-10 69.3 80 43.8
Dinv38711 Davidia involucrata HOM05D000243 ORTHO05D001390 6.6e-09 64.3 131 32.8
Aa31LG4G11150 Aethionema arabicum HOM05D000243 ORTHO05D000278 1.6e-07 59.7 48 62.5
Peaxi162Scf00129g00133 Petunia axillaris HOM05D000243 ORTHO05D001390 1.6e-07 59.7 68 45.6
Migut.J01284 Erythranthe guttata HOM05D009630 ORTHO05D001390 2.1e-07 59.3 47 57.4
DCAR_026051 Daucus carota HOM05D000243 ORTHO05D001390 1.1e-06 57.0 79 43.0
Glyma.13G063100 Glycine max HOM05D000243 ORTHO05D001390 1.4e-06 56.6 58 50.0
Aa31LG7G3600 Aethionema arabicum HOM05D000243 ORTHO05D001390 1.8e-06 56.2 57 50.9
Dinv19394 Davidia involucrata HOM05D000243 ORTHO05D000007 1.8e-06 56.2 55 52.7
CsaV3_1G002310 Cucumis sativus L. HOM05D000243 ORTHO05D001390 2.4e-06 55.8 59 47.5
Glyma.19G022200 Glycine max HOM05D000243 ORTHO05D001390 2.4e-06 55.8 65 46.2
Lalb_Chr06g0175341 Lupinus albus HOM05D000243 ORTHO05D001390 3.1e-06 55.5 50 56.0
PGR044G0023 Punica granatum HOM05D000243 ORTHO05D001390 3.1e-06 55.5 70 44.3
Gohir.A05G365900 Gossypium hirsutum HOM05D000243 ORTHO05D001390 4.0e-06 55.1 53 47.2
Lalb_Chr02g0159381 Lupinus albus HOM05D000243 ORTHO05D001390 4.0e-06 55.1 48 56.2
Potri.015G032700 Populus trichocarpa HOM05D000243 ORTHO05D000278 4.0e-06 55.1 88 38.6
SalBow7G1776 Salvia bowleyana HOM05D000243 ORTHO05D000278 4.0e-06 55.1 94 35.1
Atru.chr9.161 Acer truncatum HOM05D000243 ORTHO05D001390 5.3e-06 54.7 48 54.2
Actinidia06093 Actinidia chinensis HOM05D000243 ORTHO05D001390 5.3e-06 54.7 50 52.0
Gohir.D04G049100 Gossypium hirsutum HOM05D000243 ORTHO05D001390 5.3e-06 54.7 53 47.2
Gorai.012G054400 Gossypium raimondii HOM05D000243 ORTHO05D001390 5.3e-06 54.7 53 47.2
Sed0024770 Sechium edule HOM05D000243 ORTHO05D001390 5.3e-06 54.7 48 52.1
Lj2g0001982 Lotus japonicus HOM05D000243 ORTHO05D000278 6.9e-06 54.3 50 50.0
Aa31LG4G4890 Aethionema arabicum HOM05D000243 ORTHO05D001390 9.0e-06 53.9 50 50.0
CAN.G206.152 Capsicum annuum HOM05D000243 ORTHO05D001390 9.0e-06 53.9 45 46.7
ClCG06G016220 Citrullus lanatus HOM05D000243 ORTHO05D001390 9.0e-06 53.9 57 49.1
MELO3C017171.2 Cucumis melo HOM05D000243 ORTHO05D001390 9.0e-06 53.9 57 49.1
Nitab4.5_0000136g0410 Nicotiana tabacum HOM05D000243 ORTHO05D000278 9.0e-06 53.9 45 53.3
Solyc04g014260.2 Solanum lycopersicum HOM05D000243 ORTHO05D000278 9.0e-06 53.9 56 44.6


User provided reference genes

Program Settings