Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.0e-106 389.0 190 100.0
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.1e-72 276.9 174 82.2
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 2.7e-50 202.6 175 65.7
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 6.4e-44 181.4 181 59.1
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.4e-43 179.5 173 59.0
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 9.3e-43 177.6 181 55.2
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 1.6e-42 176.8 177 56.5
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 3.0e-41 172.6 170 57.6
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 6.7e-41 171.4 176 57.4
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.5e-40 170.2 174 54.6
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.9e-40 169.9 176 57.4
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 7.4e-40 167.9 176 57.4
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 7.4e-40 167.9 175 53.1
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.4e-40 167.9 175 53.1
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 9.6e-40 167.5 169 55.6
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.3e-39 167.2 175 52.6
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.1e-39 166.4 178 54.5
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 2.1e-39 166.4 136 64.7
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.8e-39 166.0 180 51.7
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.8e-39 166.0 168 58.3
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.8e-39 166.0 168 58.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 2.8e-39 166.0 176 56.2
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 3.7e-39 165.6 130 64.6
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 6.2e-39 164.9 174 54.6
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 8.1e-39 164.5 175 51.4
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 8.1e-39 164.5 130 65.4
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.4e-38 163.7 134 63.4
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.4e-38 163.7 174 56.3
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.4e-38 163.7 175 50.9
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.8e-38 163.3 178 53.4
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.8e-38 163.3 136 62.5
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.8e-38 163.3 129 65.1
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 3.1e-38 162.5 132 63.6
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 3.1e-38 162.5 134 62.7
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 3.1e-38 162.5 134 62.7
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 3.1e-38 162.5 168 55.4
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.0e-38 162.2 177 52.5
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 5.3e-38 161.8 127 64.6
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.2e-37 160.6 169 55.6
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.0e-37 159.8 136 60.3
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.6e-37 159.5 179 50.8
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.6e-37 159.5 179 50.8
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 2.6e-37 159.5 179 50.8
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 3.4e-37 159.1 134 61.2
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 3.4e-37 159.1 134 61.2
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 4.5e-37 158.7 168 54.8
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 5.8e-37 158.3 135 60.7
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 7.6e-37 157.9 134 59.7
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 1.0e-36 157.5 139 59.0
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.0e-36 157.5 128 63.3
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 1.0e-36 157.5 130 61.5
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.0e-36 157.5 178 51.1
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 1.0e-36 157.5 130 63.1
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.7e-36 156.8 149 58.4
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 2.2e-36 156.4 173 52.0
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 2.2e-36 156.4 129 62.8
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 2.9e-36 156.0 149 57.0
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 3.8e-36 155.6 169 53.8
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 4.9e-36 155.2 127 60.6
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 6.5e-36 154.8 187 48.7
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 6.5e-36 154.8 128 62.5
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 6.5e-36 154.8 130 63.1
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 6.5e-36 154.8 175 51.4
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.1e-35 154.1 176 51.1
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.4e-35 153.7 180 53.9
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 1.4e-35 153.7 155 57.4
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 1.9e-35 153.3 169 53.8
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 3.2e-35 152.5 131 59.5
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 4.2e-35 152.1 124 62.1
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 7.1e-35 151.4 142 54.9
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 1.6e-34 150.2 124 61.3
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.6e-34 150.2 166 53.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.6e-34 150.2 166 53.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.6e-34 150.2 173 51.4
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.6e-34 150.2 169 53.3
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 2.1e-34 149.8 184 50.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 4.6e-34 148.7 134 59.0
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 6.0e-34 148.3 126 60.3
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 7.9e-34 147.9 156 52.6
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.0e-33 147.5 146 54.8
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.3e-33 146.4 125 62.4
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.3e-33 146.4 94 73.4
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 6.7e-33 144.8 127 61.4
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 6.7e-33 144.8 157 51.0
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 8.7e-33 144.4 95 71.6
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.1e-32 144.1 96 71.9
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.5e-32 143.7 95 70.5
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 1.9e-32 143.3 163 54.0
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.5e-32 142.9 93 73.1
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 2.5e-32 142.9 171 48.0
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 3.3e-32 142.5 173 49.1
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 4.3e-32 142.1 162 51.9
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 7.4e-32 141.4 172 49.4
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.6e-31 140.2 94 71.3
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 2.1e-31 139.8 126 58.7
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.1e-30 137.5 92 71.7
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.8e-30 136.7 175 47.4
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.5e-29 133.7 94 68.1
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 5.5e-27 125.2 161 47.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 1.0e-25 120.9 91 61.5
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.0e-25 119.4 83 71.1
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 5.7e-24 115.2 137 45.3
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 2.2e-23 113.2 101 55.4
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.8e-23 112.8 144 47.2
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 6.9e-22 108.2 101 51.5
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.0e-21 106.7 59 81.4
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.5e-11 73.2 67 58.2


User provided reference genes

Program Settings