Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.0e-238 827.4 426 100.0
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.5e-154 550.1 428 67.8
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.5e-136 489.6 431 62.9
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.0e-134 484.2 461 59.0
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.7e-129 466.8 531 52.2
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.2e-128 462.6 472 59.1
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.2e-128 461.5 439 59.2
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.7e-127 459.5 299 77.3
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.7e-127 459.5 330 71.8
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.4e-126 457.2 299 74.9
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 8.3e-124 448.0 483 53.0
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.3e-121 439.9 288 75.7
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 2.3e-121 439.9 305 70.2
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 3.5e-114 416.0 437 53.3
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.5e-114 415.6 290 71.7
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 7.8e-114 414.8 435 53.1
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 1.0e-113 414.5 442 53.2
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.3e-113 414.1 442 53.2
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 1.3e-113 414.1 434 53.2
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 3.8e-113 412.5 442 52.9
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 6.6e-113 411.8 442 52.7
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 1.1e-112 411.0 434 52.1
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 3.3e-112 409.5 468 51.3
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 3.3e-112 409.5 438 52.3
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.3e-112 409.1 443 52.4
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 7.3e-112 408.3 435 52.0
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 7.3e-112 408.3 438 52.5
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 1.2e-111 407.5 442 51.6
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 1.6e-111 407.1 434 51.6
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 1.6e-111 407.1 438 53.0
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.1e-111 406.8 435 52.6
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 2.1e-111 406.8 443 51.7
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 4.7e-111 405.6 438 52.3
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.1e-111 405.2 438 52.5
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 8.0e-111 404.8 437 51.5
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.4e-110 404.1 435 52.4
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.4e-110 404.1 554 46.2
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 1.8e-110 403.7 434 50.9
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 1.8e-110 403.7 434 51.2
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 2.3e-110 403.3 437 51.3
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 2.3e-110 403.3 433 52.2
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.3e-110 403.3 411 56.4
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 3.1e-110 402.9 434 52.3
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 5.2e-110 402.1 450 50.9
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 6.8e-110 401.7 434 51.2
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 1.2e-109 401.0 434 50.2
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 1.5e-109 400.6 434 51.4
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.0e-109 400.2 433 51.7
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.4e-109 399.4 433 50.8
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 3.4e-109 399.4 433 50.8
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 3.4e-109 399.4 434 51.4
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 5.8e-109 398.7 433 51.3
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 7.5e-109 398.3 435 51.0
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 7.5e-109 398.3 435 51.5
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 9.8e-109 397.9 434 51.2
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 9.8e-109 397.9 434 51.2
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.3e-108 397.5 434 50.5
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 1.7e-108 397.1 433 50.1
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.7e-108 397.1 435 51.3
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.7e-108 397.1 434 50.7
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 1.7e-108 397.1 434 50.5
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 4.9e-108 395.6 433 50.1
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 4.9e-108 395.6 441 50.3
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 6.4e-108 395.2 434 50.5
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 6.4e-108 395.2 284 70.4
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 1.4e-107 394.0 440 50.5
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 1.4e-107 394.0 427 50.6
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 1.9e-107 393.7 434 50.5
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 1.9e-107 393.7 435 50.1
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.4e-107 393.3 435 51.0
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 3.2e-107 392.9 434 50.7
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 5.4e-107 392.1 437 50.1
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 5.4e-107 392.1 433 49.7
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 5.4e-107 392.1 433 49.7
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 5.4e-107 392.1 434 50.5
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 9.2e-107 391.3 435 50.1
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 9.2e-107 391.3 435 49.7
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 9.2e-107 391.3 437 50.8
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 1.6e-106 390.6 434 50.2
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.7e-106 389.8 397 53.9
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 2.7e-106 389.8 433 50.1
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 3.5e-106 389.4 432 49.1
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 6.0e-106 388.7 437 49.7
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 6.0e-106 388.7 441 48.8
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 1.0e-105 387.9 437 49.7
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 1.0e-105 387.9 286 67.5
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 1.0e-105 387.9 430 50.9
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 1.3e-105 387.5 437 49.9
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.7e-105 387.1 444 51.6
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 3.9e-105 386.0 434 49.8
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 5.0e-105 385.6 434 50.0
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 6.6e-105 385.2 437 49.9
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 8.6e-105 384.8 437 49.9
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.1e-104 384.4 437 49.2
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 1.1e-104 384.4 433 49.9
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 1.1e-104 384.4 437 50.6
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 1.1e-104 384.4 434 49.8
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.5e-104 384.0 434 50.2
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 1.5e-104 384.0 437 49.2
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 1.5e-104 384.0 432 50.2
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 2.5e-104 383.3 436 50.5
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 3.3e-104 382.9 434 48.8
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 3.3e-104 382.9 434 49.3
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 3.3e-104 382.9 437 49.0
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 5.6e-104 382.1 426 49.3
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 4.7e-103 379.0 434 49.8
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 1.4e-102 377.5 434 49.1
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 1.8e-102 377.1 434 48.6
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 3.1e-102 376.3 433 49.2
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 4.0e-102 375.9 432 48.4
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.2e-101 374.4 435 49.9
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.5e-101 374.0 317 61.8
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 2.6e-101 373.2 433 48.7
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 7.5e-101 371.7 323 58.5
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 2.9e-100 369.8 433 47.8
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 3.7e-100 369.4 434 47.5
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 4.9e-100 369.0 435 48.7
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 6.4e-100 368.6 434 47.9
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 6.4e-100 368.6 442 48.0
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 8.3e-100 368.2 437 48.3
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 8.3e-100 368.2 435 48.5
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 8.3e-100 368.2 435 47.8
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 1.9e-99 367.1 434 47.5
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 3.2e-99 366.3 434 47.2
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.2e-99 366.3 290 66.2
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 1.6e-98 364.0 437 47.1
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 4.6e-98 362.5 437 47.1
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 4.6e-98 362.5 437 47.1
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 4.6e-98 362.5 437 47.1
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 4.6e-98 362.5 437 47.1
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 4.6e-98 362.5 442 47.3
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 7.8e-98 361.7 435 47.4
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 7.8e-98 361.7 437 47.4
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 7.8e-98 361.7 433 48.0
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 7.8e-98 361.7 434 47.7
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 7.8e-98 361.7 440 46.8
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 1.0e-97 361.3 437 46.9
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 1.3e-97 360.9 305 58.0
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 1.3e-97 360.9 398 50.5
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 1.3e-97 360.9 437 47.4
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 6.6e-97 358.6 434 45.2
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 8.6e-97 358.2 432 47.0
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 1.5e-96 357.5 439 46.7
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.9e-96 357.1 323 56.0
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 2.5e-96 356.7 434 46.1
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 2.8e-95 353.2 303 58.7
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 6.2e-95 352.1 305 58.4
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.4e-94 350.9 435 48.0
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.1e-91 341.3 434 46.1
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.9e-91 340.5 305 59.7
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.3e-88 328.6 252 67.5
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 1.1e-86 324.7 443 43.6
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 9.9e-85 318.2 435 45.3
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 2.4e-83 313.5 302 53.6
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 4.6e-74 282.7 257 55.6
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.5e-72 277.7 282 55.3
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.9e-60 236.9 289 48.4
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 6.7e-57 225.7 299 45.8
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 4.6e-50 203.0 284 44.0
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 2.4e-46 190.7 258 44.2
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 3.1e-46 190.3 284 38.7
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 3.2e-43 180.3 155 57.4
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 4.6e-42 176.4 211 49.8
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.3e-36 158.3 140 58.6
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 6.5e-36 156.0 134 61.9
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 1.4e-33 148.3 109 61.5
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 6.3e-31 139.4 127 54.3
Medtr0776s0010 Medicago truncatula HOM05D001546 ORTHO05D004259 5.9e-29 132.9 193 37.8
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.7e-29 132.5 277 35.4
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 3.8e-28 130.2 188 38.8
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 4.2e-27 126.7 278 32.7
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.1e-24 118.6 205 35.1
SalBow6G0008 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.5e-24 118.2 82 65.9
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 2.6e-24 117.5 205 34.6
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 6.3e-23 112.8 136 40.4
CBR_g46749 Chara braunii HOM05D003621 ORTHO05D004259 1.4e-22 111.7 197 35.0
Lsat_1_v5_gn_3_101741 Lactuca sativa HOM05D003621 ORTHO05D004259 3.6e-18 97.1 103 50.5
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.8e-15 86.7 99 44.4
BcaB03g14578 Brassica carinata HOM05D003621 ORTHO05D004259 2.7e-13 80.9 128 35.9
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.5e-13 80.1 52 61.5
Lsat_1_v5_gn_1_124140 Lactuca sativa HOM05D003621 ORTHO05D004259 1.9e-11 74.7 65 47.7
HanXRQChr10g0282301 Helianthus annuus HOM05D003621 ORTHO05D004259 1.2e-10 72.0 66 50.0
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 7.0e-06 56.2 67 43.3


User provided reference genes

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