Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.7e-247 857.8 582 100.0
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.3e-183 644.8 575 66.6
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.2e-163 578.2 550 69.6
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.5e-160 568.2 609 58.1
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.2e-146 524.2 582 52.6
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 4.7e-146 522.3 582 51.0
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.3e-145 520.0 520 66.5
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.7e-133 479.9 582 53.3
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.4e-128 463.0 294 78.2
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.7e-127 460.7 291 79.0
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 1.7e-127 460.7 308 73.7
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.2e-127 460.3 301 76.7
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.1e-125 453.8 299 74.9
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.1e-118 428.7 300 72.0
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.5e-117 426.4 276 77.2
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.0e-116 423.3 576 48.1
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.4e-113 413.7 285 72.6
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 2.9e-111 406.8 577 42.1
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.2e-110 403.3 309 67.6
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 1.3e-108 397.9 578 49.1
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.3e-108 397.1 577 45.1
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 3.0e-108 396.7 577 44.4
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.1e-108 396.0 577 44.7
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 8.7e-108 395.2 577 41.2
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 1.9e-107 394.0 576 43.9
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 1.9e-107 394.0 577 43.0
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 2.5e-107 393.7 577 44.0
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 2.5e-107 393.7 583 41.5
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 3.3e-107 393.3 577 40.9
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.3e-107 392.9 577 41.1
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.6e-107 392.5 577 41.2
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 5.6e-107 392.5 577 44.0
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 5.6e-107 392.5 576 41.7
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 5.6e-107 392.5 576 41.7
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 7.4e-107 392.1 577 44.7
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 7.4e-107 392.1 576 48.3
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 9.6e-107 391.7 576 43.8
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 2.1e-106 390.6 577 41.4
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 2.8e-106 390.2 577 41.6
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 2.8e-106 390.2 577 44.2
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.7e-106 389.8 577 41.1
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 3.7e-106 389.8 577 41.2
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 4.8e-106 389.4 577 43.8
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 4.8e-106 389.4 577 44.0
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 4.8e-106 389.4 577 41.4
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 8.1e-106 388.7 577 44.2
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 8.1e-106 388.7 576 41.1
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 8.1e-106 388.7 583 41.9
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 1.1e-105 388.3 577 45.6
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.1e-105 388.3 577 43.7
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 1.4e-105 387.9 577 44.4
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.4e-105 387.9 577 41.1
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 1.8e-105 387.5 580 41.7
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 2.4e-105 387.1 580 41.9
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.4e-105 387.1 575 43.5
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 2.4e-105 387.1 577 41.2
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 4.0e-105 386.3 577 42.5
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 4.0e-105 386.3 577 42.5
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 4.0e-105 386.3 577 42.3
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 4.0e-105 386.3 580 41.7
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 5.3e-105 386.0 577 44.4
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 5.3e-105 386.0 576 42.7
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 6.9e-105 385.6 297 66.3
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 9.0e-105 385.2 577 42.8
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 9.0e-105 385.2 577 41.1
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 9.0e-105 385.2 576 41.3
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 1.2e-104 384.8 576 44.8
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.2e-104 384.8 575 43.8
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 1.2e-104 384.8 576 45.1
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 2.0e-104 384.0 582 40.0
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 2.0e-104 384.0 580 40.9
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 2.0e-104 384.0 577 44.9
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 2.0e-104 384.0 580 41.0
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.6e-104 383.6 577 39.9
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 2.6e-104 383.6 580 41.4
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 2.6e-104 383.6 577 42.1
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 2.6e-104 383.6 576 43.6
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 3.4e-104 383.3 577 46.1
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 3.4e-104 383.3 577 46.1
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 3.4e-104 383.3 577 46.1
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 3.4e-104 383.3 575 43.8
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 3.4e-104 383.3 577 43.8
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 4.5e-104 382.9 577 40.7
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 4.5e-104 382.9 577 46.8
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 5.8e-104 382.5 576 43.1
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 7.6e-104 382.1 577 45.9
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 7.6e-104 382.1 577 45.9
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 9.9e-104 381.7 575 43.1
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 9.9e-104 381.7 577 45.9
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 1.3e-103 381.3 577 41.6
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.3e-103 381.3 576 40.6
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.7e-103 380.9 576 43.1
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.7e-103 380.9 284 66.2
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 2.9e-103 380.2 577 42.1
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.8e-103 379.8 576 40.5
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 4.9e-103 379.4 577 46.8
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 4.9e-103 379.4 577 43.8
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 6.4e-103 379.0 575 46.4
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 6.4e-103 379.0 577 43.2
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 8.4e-103 378.6 577 43.8
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 8.4e-103 378.6 584 40.6
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 8.4e-103 378.6 579 43.9
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 8.4e-103 378.6 300 66.3
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 1.1e-102 378.3 576 40.8
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 1.4e-102 377.9 577 44.7
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 1.4e-102 377.9 577 45.4
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 1.4e-102 377.9 578 39.6
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 1.9e-102 377.5 584 41.1
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 1.9e-102 377.5 577 42.6
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 2.4e-102 377.1 580 43.1
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 4.2e-102 376.3 580 40.9
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 5.5e-102 375.9 286 65.0
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 5.5e-102 375.9 575 41.7
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 7.1e-102 375.6 578 40.0
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 9.3e-102 375.2 577 44.4
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 9.3e-102 375.2 585 41.4
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 1.2e-101 374.8 576 41.3
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.2e-101 374.8 577 39.5
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 1.2e-101 374.8 577 41.4
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 2.1e-101 374.0 577 44.2
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 2.1e-101 374.0 577 44.2
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 4.6e-101 372.9 284 65.5
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 6.0e-101 372.5 577 41.8
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 7.9e-101 372.1 284 65.8
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 1.3e-100 371.3 575 40.3
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 1.3e-100 371.3 593 39.8
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.8e-100 370.9 286 64.0
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 3.9e-100 369.8 579 42.1
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 5.1e-100 369.4 577 42.6
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 5.1e-100 369.4 577 42.3
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 8.7e-100 368.6 575 40.2
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 1.1e-99 368.2 577 42.6
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 1.5e-99 367.9 577 43.2
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 1.5e-99 367.9 577 39.9
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 1.5e-99 367.9 583 39.8
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.5e-99 367.1 284 64.8
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 7.4e-99 365.5 284 63.4
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 7.4e-99 365.5 288 63.5
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 8.2e-98 362.1 283 64.7
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.1e-97 361.7 577 39.3
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 1.8e-97 360.9 284 63.4
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 2.4e-97 360.5 284 63.4
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 3.1e-97 360.1 289 62.3
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 4.0e-97 359.8 577 44.0
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 5.3e-97 359.4 299 63.9
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 7.6e-96 355.5 577 41.9
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 7.6e-96 355.5 286 61.2
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 1.1e-94 351.7 284 60.9
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 2.5e-94 350.5 578 40.0
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 9.3e-94 348.6 281 60.9
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.5e-91 340.5 234 71.8
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 6.5e-87 325.9 286 58.4
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.4e-86 324.7 576 37.8
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.3e-79 301.6 577 38.8
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 5.7e-75 286.2 258 57.4
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.5e-67 261.5 279 51.6
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 5.5e-62 243.0 284 50.7
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 3.2e-54 217.2 439 35.1
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 2.5e-46 191.0 300 41.7
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 4.7e-45 186.8 283 38.9
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 1.3e-42 178.7 398 35.9
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 5.9e-40 169.9 154 55.2
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 9.5e-38 162.5 210 46.7
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 4.7e-37 160.2 140 60.7
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 2.9e-34 151.0 140 51.4
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 6.4e-34 149.8 134 59.7
Medtr0776s0010 Medicago truncatula HOM05D001546 ORTHO05D004259 1.9e-30 138.3 200 38.5
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.1e-29 134.8 119 56.3
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 3.6e-29 134.0 199 38.7
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.3e-26 125.6 205 36.6
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.7e-26 125.2 205 36.1
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.7e-26 125.2 278 33.8
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 3.7e-26 124.0 278 32.4
SalBow6G0008 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.9e-26 123.6 82 68.3
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 7.8e-24 116.3 136 42.6
CBR_g46749 Chara braunii HOM05D003621 ORTHO05D004259 2.5e-22 111.3 149 40.3
Lsat_1_v5_gn_3_101741 Lactuca sativa HOM05D003621 ORTHO05D004259 6.8e-20 103.2 88 59.1
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.1e-17 95.9 60 70.0
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.4e-17 93.6 64 67.2
Lsat_1_v5_gn_1_124140 Lactuca sativa HOM05D003621 ORTHO05D004259 1.9e-14 85.1 65 56.9
BcaB03g14578 Brassica carinata HOM05D003621 ORTHO05D004259 2.1e-13 81.6 98 45.9
HanXRQChr10g0282301 Helianthus annuus HOM05D003621 ORTHO05D004259 1.8e-12 78.6 60 58.3
Nn8g39168 Nelumbo nucifera HOM05D003621 ORTHO05D004259 8.9e-12 76.3 106 38.7
TAR376G0449 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.9e-09 68.6 71 43.7
CDE02G1223 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 2.1e-08 65.1 41 65.9
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.5e-06 58.2 63 47.6


User provided reference genes

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