Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01024 Erythranthe guttata HOM05D004855 ORTHO05D005656 1.2e-55 219.5 108 100.0
MSTRG.5853 Avicennia marina HOM05D004855 ORTHO05D005656 1.5e-45 186.0 108 83.3
SGA_v2.0_scaffold31G12906 Striga asiatica HOM05D004855 ORTHO05D005656 3.3e-45 184.9 104 83.7
Migut.L01788 Erythranthe guttata HOM05D004855 ORTHO05D005656 5.6e-45 184.1 108 80.6
Oeu047859.1 Olea europaea HOM05D004855 ORTHO05D005656 1.8e-43 179.1 108 78.7
SalBow3G4427 Salvia bowleyana HOM05D004855 ORTHO05D005656 1.2e-42 176.4 108 75.9
Cc06_g05940 Coffea canephora HOM05D004855 ORTHO05D005656 1.7e-41 172.6 108 75.9
CAN.G397.61 Capsicum annuum HOM05D004855 ORTHO05D005656 2.7e-39 165.2 108 72.2
Sopen10g031710 Solanum pennellii HOM05D004855 ORTHO05D005656 4.6e-39 164.5 108 69.4
Peaxi162Scf00404g00216 Petunia axillaris HOM05D004855 ORTHO05D005656 1.8e-38 162.5 108 72.2
Dinv21197 Davidia involucrata HOM05D004855 ORTHO05D005656 6.7e-38 160.6 109 73.4
GSVIVG01033859001 Vitis vinifera HOM05D004855 ORTHO05D005656 1.1e-37 159.8 109 71.6
Cfa016620 Carpinus fangiana HOM05D004855 ORTHO05D005656 1.9e-37 159.1 108 70.4
CiPaw.09G015100 Carya illinoinensis HOM05D004855 ORTHO05D005656 1.9e-37 159.1 108 69.4
Haze_19625 Corylus avellana HOM05D004855 ORTHO05D005656 2.5e-37 158.7 108 70.4
Nitab4.5_0000692g0080 Nicotiana tabacum HOM05D004855 ORTHO05D005656 2.5e-37 158.7 108 70.4
Actinidia31268 Actinidia chinensis HOM05D004855 ORTHO05D005656 4.3e-37 157.9 108 71.3
CAN.G128.111 Capsicum annuum HOM05D004855 ORTHO05D005656 9.7e-37 156.8 108 67.6
Sc20g0006340 Simmondsia chinensis HOM05D004855 ORTHO05D005656 2.2e-36 155.6 108 68.5
CSS0028852 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 1.4e-35 152.9 108 67.6
Lsat_1_v5_gn_8_77441 Lactuca sativa HOM05D004855 ORTHO05D005656 1.4e-35 152.9 108 68.5
Lj1g0021036 Lotus japonicus HOM05D004855 ORTHO05D005656 1.4e-35 152.9 109 67.9
PGR142G1385 Punica granatum HOM05D004855 ORTHO05D005656 1.4e-35 152.9 108 66.7
PGSC0003DMG400008876 Solanum tuberosum HOM05D004855 ORTHO05D005656 1.4e-35 152.9 108 68.5
MELO3C009479.2 Cucumis melo HOM05D004855 ORTHO05D005656 1.8e-35 152.5 108 66.7
Prupe.7G108800 Prunus persica HOM05D004855 ORTHO05D005656 2.4e-35 152.1 108 66.7
Sopen09g004650 Solanum pennellii HOM05D004855 ORTHO05D005656 2.4e-35 152.1 108 67.6
TWI74G1617 Tripterygium wilfordii HOM05D004855 ORTHO05D005656 2.4e-35 152.1 109 69.7
Eucgr.K02028 Eucalyptus grandis HOM05D004855 ORTHO05D005656 3.1e-35 151.8 108 65.7
TWI77G0302 Tripterygium wilfordii HOM05D004855 ORTHO05D005656 5.3e-35 151.0 109 69.7
ClCG10G018900 Citrullus lanatus HOM05D004855 ORTHO05D005656 1.5e-34 149.4 108 65.7
TAR633G0291 Trochodendron aralioides HOM05D004855 ORTHO05D005656 2.0e-34 149.1 109 66.1
Nn6g34881 Nelumbo nucifera HOM05D004855 ORTHO05D005656 2.6e-34 148.7 109 68.8
arahy.Tifrunner.gnm1.ann1.DCW42B Arachis hypogaea HOM05D004855 ORTHO05D005656 4.5e-34 147.9 109 66.1
Glyma.03G196800 Glycine max HOM05D004855 ORTHO05D005656 4.5e-34 147.9 110 65.5
FvH4_6g18910 Fragaria vesca HOM05D004855 ORTHO05D005656 5.9e-34 147.5 108 67.6
Sed0021085 Sechium edule HOM05D004855 ORTHO05D005656 7.6e-34 147.1 108 65.7
Duzib106G1994 Durio zibethinus HOM05D004855 ORTHO05D005656 1.0e-33 146.7 108 63.0
RcHm_v2.0_Chr3g0473901 Rosa chinensis HOM05D004855 ORTHO05D005656 1.0e-33 146.7 108 66.7
CANSAT64G1995 Cannabis sativa HOM05D004855 ORTHO05D005656 1.7e-33 146.0 108 63.0
Phvul.001G191000 Phaseolus vulgaris HOM05D004855 ORTHO05D005656 1.7e-33 146.0 108 63.0
Thecc.05G090600 Theobroma cacao HOM05D004855 ORTHO05D005656 1.7e-33 146.0 108 63.9
Ciclev10013171m.g Citrus clementina HOM05D004855 ORTHO05D005656 2.9e-33 145.2 109 64.2
FAN05G0016 Fragaria x ananassa HOM05D004855 ORTHO05D005656 2.9e-33 145.2 108 66.7
Atru.chr8.1484 Acer truncatum HOM05D004855 ORTHO05D005656 3.8e-33 144.8 109 66.1
Lalb_Chr25g0288301 Lupinus albus HOM05D004855 ORTHO05D005656 3.8e-33 144.8 109 64.2
AUR62030671 Chenopodium quinoa HOM05D004855 ORTHO05D005656 8.5e-33 143.7 109 63.3
CsaV3_3G037350 Cucumis sativus L. HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 64.8
Gohir.A11G319200 Gossypium hirsutum HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 62.0
Gohir.D11G338500 Gossypium hirsutum HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 62.0
Gorai.007G368300 Gossypium raimondii HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 62.0
MD14G1024000 Malus domestica HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 61.1
TPR.G23346 Trifolium pratense HOM05D004855 ORTHO05D005656 1.4e-32 142.9 109 66.1
Ah.10g026130 Amaranthus hybridus HOM05D004855 ORTHO05D005656 1.9e-32 142.5 109 62.4
BcaC09g51486 Brassica carinata HOM05D004855 ORTHO05D005656 2.5e-32 142.1 108 59.3
BraA01t01006Z Brassica rapa HOM05D004855 ORTHO05D005656 2.5e-32 142.1 108 59.3
VMungo1383G3261 Vigna mungo HOM05D004855 ORTHO05D005656 2.5e-32 142.1 107 60.7
AT4G18590 Arabidopsis thaliana HOM05D004855 ORTHO05D005656 3.2e-32 141.7 108 58.3
THA.LOC104804847 Tarenaya hassleriana HOM05D004855 ORTHO05D005656 3.2e-32 141.7 108 61.1
AL7G35690 Arabidopsis lyrata HOM05D004855 ORTHO05D005656 4.2e-32 141.4 108 58.3
CsaV3_5G035370 Cucumis sativus L. HOM05D004855 ORTHO05D005656 4.2e-32 141.4 108 61.1
FAN02G3816 Fragaria x ananassa HOM05D004855 ORTHO05D005656 4.2e-32 141.4 108 64.8
Medtr7g104870 Medicago truncatula HOM05D004855 ORTHO05D005656 4.2e-32 141.4 108 63.9
Cfa021941 Carpinus fangiana HOM05D004855 ORTHO05D005656 7.2e-32 140.6 108 63.9
QL04p046696 Quercus lobata HOM05D004855 ORTHO05D005656 7.2e-32 140.6 107 60.7
Aa31LG6G1320 Aethionema arabicum HOM05D004855 ORTHO05D005656 9.3e-32 140.2 108 57.4
ECA236G2758 Erigeron canadensis HOM05D004855 ORTHO05D005656 1.2e-31 139.8 108 62.0
GSVIVG01000981001 Vitis vinifera HOM05D004855 ORTHO05D005656 1.6e-31 139.4 109 64.2
MELO3C012349.2 Cucumis melo HOM05D004855 ORTHO05D005656 2.1e-31 139.0 108 61.1
Potri.006G211900 Populus trichocarpa HOM05D004855 ORTHO05D005656 2.1e-31 139.0 109 64.2
Potri.006G212100 Populus trichocarpa HOM05D004855 ORTHO05D005656 2.1e-31 139.0 109 64.2
Aqoxy4G02764 Aquilegia oxysepala HOM05D004855 ORTHO05D005656 2.7e-31 138.7 109 65.1
BcaNung03818 Brassica carinata HOM05D004855 ORTHO05D005656 2.7e-31 138.7 108 58.3
BcaNung06738 Brassica carinata HOM05D004855 ORTHO05D005656 2.7e-31 138.7 108 58.3
Dinv10926 Davidia involucrata HOM05D004855 ORTHO05D005656 2.7e-31 138.7 109 65.1
Sed0005547 Sechium edule HOM05D004855 ORTHO05D005656 2.7e-31 138.7 108 58.3
Carub.0007s2265 Capsella rubella HOM05D004855 ORTHO05D005656 3.6e-31 138.3 108 57.4
Manes.09G054300 Manihot esculenta HOM05D004855 ORTHO05D005656 4.6e-31 137.9 109 64.2
PSO339G3393 Papaver somniferum HOM05D004855 ORTHO05D005656 6.1e-31 137.5 108 64.8
CiPaw.13G039700 Carya illinoinensis HOM05D004855 ORTHO05D005656 7.9e-31 137.1 108 63.9
Ca_09013_v3 Cicer arietinum L. HOM05D004855 ORTHO05D005656 7.9e-31 137.1 109 62.4
Sp5g09660 Schrenkiella parvula HOM05D004855 ORTHO05D005656 1.4e-30 136.3 108 59.3
THA.LOC104805250 Tarenaya hassleriana HOM05D004855 ORTHO05D005656 1.4e-30 136.3 108 57.4
Thhalv10026639m.g Eutrema salsugineum HOM05D004855 ORTHO05D005656 1.8e-30 136.0 108 56.5
PSO384G0979 Papaver somniferum HOM05D004855 ORTHO05D005656 1.8e-30 136.0 108 63.9
AL5G33410 Arabidopsis lyrata HOM05D004855 ORTHO05D005656 5.1e-30 134.4 109 58.7
Solyc10g081210.3 Solanum lycopersicum HOM05D004855 ORTHO05D005656 5.1e-30 134.4 90 66.7
Potri.010G239200 Populus trichocarpa HOM05D004855 ORTHO05D005656 6.7e-30 134.0 108 58.3
PGSC0003DMG400028113 Solanum tuberosum HOM05D004855 ORTHO05D005656 1.1e-29 133.3 84 72.6
Thhalv10010848m.g Eutrema salsugineum HOM05D004855 ORTHO05D005656 1.5e-29 132.9 108 58.3
Sabra10G0187300 Salix brachista HOM05D004855 ORTHO05D005656 1.5e-29 132.9 108 58.3
Carub.0005s1905 Capsella rubella HOM05D004855 ORTHO05D005656 3.3e-29 131.7 109 56.9
Nitab4.5_0003808g0090 Nicotiana tabacum HOM05D004855 ORTHO05D005656 3.3e-29 131.7 91 70.3
CANSAT78G0615 Cannabis sativa HOM05D004855 ORTHO05D005656 7.4e-29 130.6 108 56.5
Nitab4.5_0000062g0480 Nicotiana tabacum HOM05D004855 ORTHO05D005656 9.7e-29 130.2 91 70.3
Lj5g0001855 Lotus japonicus HOM05D004855 ORTHO05D005656 1.3e-28 129.8 108 58.3
AT3G52630 Arabidopsis thaliana HOM05D004855 ORTHO05D005656 1.7e-28 129.4 109 56.9
Glyma.10G278800 Glycine max HOM05D004855 ORTHO05D005656 1.7e-28 129.4 108 57.4
Phvul.007G022600 Phaseolus vulgaris HOM05D004855 ORTHO05D005656 1.7e-28 129.4 108 55.6
CDE08G1222 Ceratophyllum demersum HOM05D004855 ORTHO05D005656 2.2e-28 129.0 108 56.5
CARHR162450 Cardamine hirsuta HOM05D004855 ORTHO05D005656 2.8e-28 128.6 109 57.8
MBI18_g09594_MAGBIO Magnolia biondii HOM05D004855 ORTHO05D005656 3.7e-28 128.3 108 57.4
BcaB02g07823 Brassica carinata HOM05D004855 ORTHO05D005656 4.8e-28 127.9 110 57.3
MD12G1025300 Malus domestica HOM05D004855 ORTHO05D005656 4.8e-28 127.9 104 57.7
Rhsim02G0090500 Rhododendron simsii HOM05D004855 ORTHO05D005656 6.3e-28 127.5 86 70.9
RhsimUnG0050400 Rhododendron simsii HOM05D000314 ORTHO05D000189 6.3e-28 127.5 99 62.6
VMungo0720G0894 Vigna mungo HOM05D004855 ORTHO05D005656 6.3e-28 127.5 108 55.6
Psat3g032240 Pisum sativum HOM05D004855 ORTHO05D005656 1.1e-27 126.7 112 57.1
Lalb_Chr21g0309181 Lupinus albus HOM05D004855 ORTHO05D005656 1.4e-27 126.3 108 56.5
QL07p038661 Quercus lobata HOM05D004855 ORTHO05D005656 1.8e-27 125.9 91 67.0
vmacro07416 Vaccinium macrocarpon HOM05D004855 ORTHO05D005656 1.8e-27 125.9 88 68.2
Rhsim03G0015500 Rhododendron simsii HOM05D004855 ORTHO05D005656 4.1e-27 124.8 104 60.6
Glyma.20G111700 Glycine max HOM05D004855 ORTHO05D005656 6.9e-27 124.0 108 54.6
ATR0706G105 Amborella trichopoda HOM05D004855 ORTHO05D005656 3.4e-26 121.7 108 56.5
BolC1t01228H Brassica oleracea HOM05D002603 ORTHO05D002907 3.4e-26 121.7 96 57.3
Os01g0253600 Oryza sativa ssp. japonica HOM05D004855 ORTHO05D005656 3.4e-26 121.7 108 54.6
Medtr1g112020 Medicago truncatula HOM05D004855 ORTHO05D005656 1.0e-25 120.2 109 54.1
Medtr1g112040 Medicago truncatula HOM05D004855 ORTHO05D005656 1.7e-25 119.4 109 55.0
COL.COLO4_29712 Corchorus olitorius HOM05D004855 ORTHO05D005656 2.2e-25 119.0 92 60.9
TPR.G20467 Trifolium pratense HOM05D004855 ORTHO05D005656 2.9e-25 118.6 109 54.1
Ca_25663_v3 Cicer arietinum L. HOM05D004855 ORTHO05D005656 5.0e-25 117.9 109 54.1
Zm00001eb333640 Zea mays HOM05D004855 ORTHO05D005656 5.0e-25 117.9 108 53.7
TPR.G2466 Trifolium pratense HOM05D004855 ORTHO05D005656 8.5e-25 117.1 109 53.2
Sp7g15440 Schrenkiella parvula HOM05D002603 ORTHO05D002907 1.1e-24 116.7 99 52.5
unitig_749.g14301 Utricularia gibba HOM05D004855 ORTHO05D005656 1.1e-24 116.7 71 67.6
EL10Ac2g02589 Beta vulgaris HOM05D004855 ORTHO05D005656 1.4e-24 116.3 87 64.4
SEGI_35741 Sequoiadendron giganteum HOM05D004855 ORTHO05D005656 2.5e-24 115.5 109 50.5
TPR.G762 Trifolium pratense HOM05D004855 ORTHO05D005656 4.2e-24 114.8 109 53.2
Eucgr.K02554 Eucalyptus grandis HOM05D004855 ORTHO05D005656 5.5e-24 114.4 108 55.6
CSS0024102 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 1.2e-23 113.2 87 64.4
Hund19922 Selenicereus undatus HOM05D004855 ORTHO05D005656 2.7e-23 112.1 87 64.4
CARHR225430 Cardamine hirsuta HOM05D004855 ORTHO05D005656 3.6e-23 111.7 88 54.5
Zm00001eb127650 Zea mays HOM05D004855 ORTHO05D005656 3.6e-23 111.7 108 50.9
Cpa.g.sc5.8 Carica papaya HOM05D004855 ORTHO05D005656 4.7e-23 111.3 86 64.0
Sabra06G0163300 Salix brachista HOM05D004855 ORTHO05D005656 6.1e-23 110.9 88 65.9
CSS0041239 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 7.9e-23 110.5 87 63.2
Manes.10G061800 Manihot esculenta HOM05D004855 ORTHO05D005656 7.9e-23 110.5 90 56.7
ClCG05G021800 Citrullus lanatus HOM05D004855 ORTHO05D005656 1.0e-22 110.2 86 60.5
A01p10600 Brassica napus HOM05D002603 ORTHO05D002907 1.4e-22 109.8 86 59.3
C01p12540 Brassica napus HOM05D002603 ORTHO05D002907 1.4e-22 109.8 86 59.3
Duzib093G1614 Durio zibethinus HOM05D004855 ORTHO05D005656 8.8e-22 107.1 88 56.8
Sed0001253 Sechium edule HOM05D004855 ORTHO05D005656 6.3e-20 100.9 88 61.4
Peaxi162Scf00153g00093 Petunia axillaris HOM05D004855 ORTHO05D005656 8.2e-20 100.5 66 74.2
HPP92_016958 Vanilla planifolia HOM05D004855 ORTHO05D005656 5.3e-19 97.8 88 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2757 Anthoceros agrestis HOM05D004855 ORTHO05D005656 6.9e-19 97.4 101 45.5
Pp3c2_28010 Physcomitrium patens HOM05D004855 ORTHO05D005656 1.2e-18 96.7 109 44.0
AagrBONN_evm.TU.Sc2ySwM_117.343 Anthoceros agrestis HOM05D004855 ORTHO05D005656 5.9e-18 94.4 101 44.6
Zm00001eb121860 Zea mays HOM05D003776 ORTHO05D005656 1.7e-17 92.8 86 54.7
Mapoly0013s0016 Marchantia polymorpha HOM05D004855 ORTHO05D005656 2.2e-17 92.4 107 41.1
Peaxi162Scf00153g00101 Petunia axillaris HOM05D004855 ORTHO05D005656 1.6e-15 86.3 74 62.2
Psat3g176360 Pisum sativum HOM05D004855 ORTHO05D005656 2.1e-15 85.9 88 52.3
SHI23843 Sapria himalayana HOM05D004855 ORTHO05D005656 1.4e-14 83.2 82 53.7
PRCOL_00005602 Prasinoderma coloniale HOM05D004855 ORTHO05D005656 2.8e-12 75.5 109 37.6
CBR_g41290 Chara braunii HOM05D004855 ORTHO05D005656 1.4e-11 73.2 112 40.2
arahy.Tifrunner.gnm1.ann1.NID4K0 Arachis hypogaea HOM05D004855 ORTHO05D005656 2.4e-11 72.4 59 59.3
MCO11G135 Micromonas commoda HOM05D004855 ORTHO05D005656 2.9e-09 65.5 113 37.2
FvH4_2g12760 Fragaria vesca HOM05D004855 ORTHO05D005656 5.0e-09 64.7 64 50.0
Zm00001eb007300 Zea mays HOM05D004855 ORTHO05D005656 8.0e-07 57.4 65 46.2
Zm00001eb198520 Zea mays HOM05D012833 ORTHO05D005656 8.0e-07 57.4 65 46.2
AUR62041784 Chenopodium quinoa HOM05D003690 ORTHO05D137882 5.2e-06 54.7 41 63.4


User provided reference genes

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